RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 TRIM6-TRIM34B2RNG4 842 aa10.28□□□□□ -0.76
SH3D19-204ENST00000427414 SSFA2P28290 1259 aa10.28□□□□□ -0.76
SH3D19-204ENST00000427414 TFCP2Q12800 502 aa10.28□□□□□ -0.76
SH3D19-204ENST00000427414 KIAA1211Q6ZU35 1233 aa10.28□□□□□ -0.76
SH3D19-204ENST00000427414 SUSD4Q5VX71 490 aa10.27□□□□□ -0.77
SH3D19-204ENST00000427414 KIF2CQ99661 725 aa10.27□□□□□ -0.77
SH3D19-204ENST00000427414 TULP1O00294 542 aaPredicted RBP10.27□□□□□ -0.77
SH3D19-204ENST00000427414 DDIT3P35638 169 aa10.27□□□□□ -0.77
SH3D19-204ENST00000427414 TBC1D2BQ9UPU7 963 aa10.27□□□□□ -0.77
SH3D19-204ENST00000427414 ZFYP08048 801 aaPredicted RBP10.26□□□□□ -0.77
SH3D19-204ENST00000427414 VGLL2Q8N8G2 317 aa10.26□□□□□ -0.77
SH3D19-204ENST00000427414 FLAD1Q8NFF5 587 aa10.26□□□□□ -0.77
SH3D19-204ENST00000427414 ANP32BQ92688 251 aaKnown RBP10.26□□□□□ -0.77
SH3D19-204ENST00000427414 FAM89AQ96GI7 184 aa10.26□□□□□ -0.77
SH3D19-204ENST00000427414 DBNLQ9UJU6 430 aaKnown RBP10.26□□□□□ -0.77
SH3D19-204ENST00000427414 CIZ1Q9ULV3 898 aaPredicted RBP10.26□□□□□ -0.77
SH3D19-204ENST00000427414 TNS1Q9HBL0 1735 aaKnown RBP10.26□□□□□ -0.77
SH3D19-204ENST00000427414 ITGA6P23229 1130 aa10.26□□□□□ -0.77
SH3D19-204ENST00000427414 HSPA4P34932 840 aa10.26□□□□□ -0.77
SH3D19-204ENST00000427414 RILPL2Q969X0 211 aa10.26□□□□□ -0.77
SH3D19-204ENST00000427414 NIP7Q9Y221 180 aaKnown RBP eCLIP10.26□□□□□ -0.77
SH3D19-204ENST00000427414 NRXN2Q9P2S2 1712 aa10.26□□□□□ -0.77
SH3D19-204ENST00000427414 ZPR1O75312 459 aa10.25□□□□□ -0.77
SH3D19-204ENST00000427414 UQCRFS1P1P0C7P4 283 aa10.25□□□□□ -0.77
SH3D19-204ENST00000427414 CCDC173Q0VFZ6 552 aa10.25□□□□□ -0.77
SH3D19-204ENST00000427414 TSGA10IPQ3SY00 556 aa10.25□□□□□ -0.77
SH3D19-204ENST00000427414 TAF7LQ5H9L4 462 aa10.25□□□□□ -0.77
SH3D19-204ENST00000427414 CCDC158Q5M9N0 1113 aa10.25□□□□□ -0.77
SH3D19-204ENST00000427414 TM6SF1Q9BZW5 370 aa10.25□□□□□ -0.77
SH3D19-204ENST00000427414 HELLSQ9NRZ9 838 aa10.25□□□□□ -0.77
SH3D19-204ENST00000427414 DIAPH3Q9NSV4 1193 aa10.25□□□□□ -0.77
SH3D19-204ENST00000427414 FOXD4L1Q9NU39 408 aa10.25□□□□□ -0.77
SH3D19-204ENST00000427414 A0A0G2JS52 829 aa10.25□□□□□ -0.77
SH3D19-204ENST00000427414 PTMSP20962 102 aa10.25□□□□□ -0.77
SH3D19-204ENST00000427414 RAB3GAP1Q15042 981 aa10.25□□□□□ -0.77
SH3D19-204ENST00000427414 KBTBD3Q8NAB2 608 aa10.25□□□□□ -0.77
SH3D19-204ENST00000427414 PDS5AQ29RF7 1337 aaKnown RBP10.25□□□□□ -0.77
SH3D19-204ENST00000427414 CARMIL3Q8ND23 1372 aa10.24□□□□□ -0.77
SH3D19-204ENST00000427414 MED23Q9ULK4 1368 aa10.24□□□□□ -0.77
SH3D19-204ENST00000427414 ST18O60284 1047 aa10.24□□□□□ -0.77
SH3D19-204ENST00000427414 PDE8BO95263 885 aa10.24□□□□□ -0.77
SH3D19-204ENST00000427414 FGFR2P21802 821 aa10.24□□□□□ -0.77
SH3D19-204ENST00000427414 NASPP49321 788 aaPredicted RBP10.24□□□□□ -0.77
SH3D19-204ENST00000427414 TTF1Q15361 905 aaPredicted RBP10.24□□□□□ -0.77
SH3D19-204ENST00000427414 TRAPPC3LQ5T215 181 aa10.24□□□□□ -0.77
SH3D19-204ENST00000427414 LPIN2Q92539 896 aa10.24□□□□□ -0.77
SH3D19-204ENST00000427414 ALDH8A1Q9H2A2 487 aaPredicted RBP10.24□□□□□ -0.77
SH3D19-204ENST00000427414 HMG20BQ9P0W2 317 aa10.24□□□□□ -0.77
SH3D19-204ENST00000427414 DOCK2Q92608 1830 aa10.24□□□□□ -0.77
SH3D19-204ENST00000427414 DUOX1Q9NRD9 1551 aa10.24□□□□□ -0.77
SH3D19-204ENST00000427414 MSNP26038 577 aaKnown RBP10.24□□□□□ -0.77
SH3D19-204ENST00000427414 PUM3Q15397 648 aaKnown RBP10.24□□□□□ -0.77
SH3D19-204ENST00000427414 TPTE2Q6XPS3 522 aa10.24□□□□□ -0.77
SH3D19-204ENST00000427414 LDHAL6AQ6ZMR3 332 aa10.24□□□□□ -0.77
SH3D19-204ENST00000427414 ZSCAN30Q86W11 494 aa10.24□□□□□ -0.77
SH3D19-204ENST00000427414 SIL1Q9H173 461 aa10.24□□□□□ -0.77
SH3D19-204ENST00000427414 BCL2L12Q9HB09 334 aa10.24□□□□□ -0.77
SH3D19-204ENST00000427414 CHMP3Q9Y3E7 222 aa10.24□□□□□ -0.77
SH3D19-204ENST00000427414 ZNF330Q9Y3S2 320 aaPredicted RBP10.24□□□□□ -0.77
SH3D19-204ENST00000427414 MYH7P12883 1935 aa10.24□□□□□ -0.77
SH3D19-204ENST00000427414 A0A1B0GUL7 405 aa10.23□□□□□ -0.77
SH3D19-204ENST00000427414 ARID4AP29374 1257 aaPredicted RBP10.23□□□□□ -0.77
SH3D19-204ENST00000427414 ZSCAN25Q6NSZ9 544 aa10.23□□□□□ -0.77
SH3D19-204ENST00000427414 SETDB2Q96T68 719 aa10.23□□□□□ -0.77
SH3D19-204ENST00000427414 LSG1Q9H089 658 aaKnown RBP10.23□□□□□ -0.77
SH3D19-204ENST00000427414 CCDC8Q9H0W5 538 aaPredicted RBP10.23□□□□□ -0.77
SH3D19-204ENST00000427414 GREM2Q9H772 168 aa10.23□□□□□ -0.77
SH3D19-204ENST00000427414 GOLGA6L22H0YM25 854 aa10.23□□□□□ -0.77
SH3D19-204ENST00000427414 PDIA4P13667 645 aaKnown RBP10.23□□□□□ -0.77
SH3D19-204ENST00000427414 GPTP24298 496 aa10.23□□□□□ -0.77
SH3D19-204ENST00000427414 IGHMBP2P38935 993 aaKnown RBP10.23□□□□□ -0.77
SH3D19-204ENST00000427414 USPL1Q5W0Q7 1092 aa10.23□□□□□ -0.77
SH3D19-204ENST00000427414 LRRC24Q50LG9 513 aa10.22□□□□□ -0.77
SH3D19-204ENST00000427414 PPP1R9BQ96SB3 815 aa10.22□□□□□ -0.77
SH3D19-204ENST00000427414 CWC22Q9HCG8 908 aaKnown RBP10.22□□□□□ -0.77
SH3D19-204ENST00000427414 BSDC1Q9NW68 430 aaPredicted RBP10.22□□□□□ -0.77
SH3D19-204ENST00000427414 K7ELQ4 463 aaPredicted RBP10.22□□□□□ -0.77
SH3D19-204ENST00000427414 GNPATO15228 680 aa10.22□□□□□ -0.77
SH3D19-204ENST00000427414 OFD1O75665 1012 aa10.22□□□□□ -0.77
SH3D19-204ENST00000427414 RBM10P98175 930 aaKnown RBP10.22□□□□□ -0.77
SH3D19-204ENST00000427414 ATP2B3Q16720 1220 aa10.22□□□□□ -0.77
SH3D19-204ENST00000427414 RNF20Q5VTR2 975 aa10.22□□□□□ -0.77
SH3D19-204ENST00000427414 TMC4Q7Z404 712 aa10.22□□□□□ -0.77
SH3D19-204ENST00000427414 KLHDC4Q8TBB5 520 aa10.22□□□□□ -0.77
SH3D19-204ENST00000427414 MAP4K1Q92918 833 aa10.22□□□□□ -0.77
SH3D19-204ENST00000427414 DBNDD2Q9BQY9 259 aa10.22□□□□□ -0.77
SH3D19-204ENST00000427414 AKAP11Q9UKA4 1901 aa10.22□□□□□ -0.77
SH3D19-204ENST00000427414 SEMA3EO15041 775 aa10.21□□□□□ -0.77
SH3D19-204ENST00000427414 SLC5A1P13866 664 aa10.21□□□□□ -0.77
SH3D19-204ENST00000427414 RXRBP28702 533 aa10.21□□□□□ -0.77
SH3D19-204ENST00000427414 UBE4AQ14139 1066 aa10.21□□□□□ -0.77
SH3D19-204ENST00000427414 METTL24Q5JXM2 366 aa10.21□□□□□ -0.77
SH3D19-204ENST00000427414 FBXO41Q8TF61 875 aa10.21□□□□□ -0.77
SH3D19-204ENST00000427414 ARHGEF1Q92888 912 aaKnown RBP10.21□□□□□ -0.77
SH3D19-204ENST00000427414 CNNM1Q9NRU3 951 aa10.21□□□□□ -0.77
SH3D19-204ENST00000427414 PAG1Q9NWQ8 432 aa10.21□□□□□ -0.77
SH3D19-204ENST00000427414 DDX49Q9Y6V7 483 aaKnown RBP10.21□□□□□ -0.77
SH3D19-204ENST00000427414 KIAA1551Q9HCM1 1747 aa10.21□□□□□ -0.77
SH3D19-204ENST00000427414 RFC4P35249 363 aa10.21□□□□□ -0.78
SH3D19-204ENST00000427414 KRT32Q14532 448 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms