RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 FAM26DQ5JW98 314 aa9.67□□□□□ -0.86
LINC00458-202ENST00000427299 GDF6Q6KF10 455 aaPredicted RBP9.67□□□□□ -0.86
LINC00458-202ENST00000427299 TMEM130Q8N3G9 435 aa9.67□□□□□ -0.86
LINC00458-202ENST00000427299 IL22RA1Q8N6P7 574 aa9.67□□□□□ -0.86
LINC00458-202ENST00000427299 RNF112Q9ULX5 631 aa9.67□□□□□ -0.86
LINC00458-202ENST00000427299 GHRHP01286 108 aa9.66□□□□□ -0.86
LINC00458-202ENST00000427299 ELOAQ14241 798 aaKnown RBP9.66□□□□□ -0.86
LINC00458-202ENST00000427299 COL26A1Q96A83 441 aa9.66□□□□□ -0.86
LINC00458-202ENST00000427299 MRPL18Q9H0U6 180 aaKnown RBP9.66□□□□□ -0.86
LINC00458-202ENST00000427299 F8W735 103 aaPredicted RBP9.65□□□□□ -0.86
LINC00458-202ENST00000427299 SETDB1Q15047 1291 aa9.65□□□□□ -0.86
LINC00458-202ENST00000427299 C16orf46Q6P387 395 aa9.65□□□□□ -0.86
LINC00458-202ENST00000427299 NLRP13Q86W25 1043 aa9.65□□□□□ -0.86
LINC00458-202ENST00000427299 MAP4K3Q8IVH8 894 aa9.65□□□□□ -0.86
LINC00458-202ENST00000427299 TNFRSF10BO14763 440 aa9.64□□□□□ -0.87
LINC00458-202ENST00000427299 ALX3O95076 343 aa9.64□□□□□ -0.87
LINC00458-202ENST00000427299 BRD2P25440 801 aaKnown RBP9.64□□□□□ -0.87
LINC00458-202ENST00000427299 Q6ZS46 218 aa9.64□□□□□ -0.87
LINC00458-202ENST00000427299 STK32AQ8WU08 396 aa9.64□□□□□ -0.87
LINC00458-202ENST00000427299 RBSNQ9H1K0 784 aa9.64□□□□□ -0.87
LINC00458-202ENST00000427299 TRIM33Q9UPN9 1127 aa9.64□□□□□ -0.87
LINC00458-202ENST00000427299 DCAF11Q8TEB1 546 aa9.63□□□□□ -0.87
LINC00458-202ENST00000427299 CAPN12Q6ZSI9 719 aa9.62□□□□□ -0.87
LINC00458-202ENST00000427299 CACTIN-AS1Q8N1I8 211 aa9.62□□□□□ -0.87
LINC00458-202ENST00000427299 OR13H1Q8NG92 308 aa9.62□□□□□ -0.87
LINC00458-202ENST00000427299 SRPK2P78362 688 aaKnown RBP9.61□□□□□ -0.87
LINC00458-202ENST00000427299 UBAP1LF5GYI3 381 aa9.6□□□□□ -0.87
LINC00458-202ENST00000427299 FSTP19883 344 aa9.6□□□□□ -0.87
LINC00458-202ENST00000427299 COL13A1Q5TAT6 717 aaPredicted RBP9.6□□□□□ -0.87
LINC00458-202ENST00000427299 SLC51AQ86UW1 340 aa9.6□□□□□ -0.87
LINC00458-202ENST00000427299 MUC3BQ9H195 1237 aa9.6□□□□□ -0.87
LINC00458-202ENST00000427299 CXXC1Q9P0U4 656 aaPredicted RBP9.6□□□□□ -0.87
LINC00458-202ENST00000427299 PPME1Q9Y570 386 aa9.6□□□□□ -0.87
LINC00458-202ENST00000427299 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.59□□□□□ -0.87
LINC00458-202ENST00000427299 AGGF1Q8N302 714 aaeCLIP9.59□□□□□ -0.87
LINC00458-202ENST00000427299 PIK3R5Q8WYR1 880 aa9.59□□□□□ -0.87
LINC00458-202ENST00000427299 GALNT11Q8NCW6 608 aa9.58□□□□□ -0.88
LINC00458-202ENST00000427299 MKNK1Q9BUB5 465 aa9.58□□□□□ -0.88
LINC00458-202ENST00000427299 FAM13BQ9NYF5 915 aa9.58□□□□□ -0.88
LINC00458-202ENST00000427299 TM4SF5O14894 197 aa9.57□□□□□ -0.88
LINC00458-202ENST00000427299 ATP11AP98196 1134 aa9.57□□□□□ -0.88
LINC00458-202ENST00000427299 PTCD1O75127 700 aaKnown RBP9.56□□□□□ -0.88
LINC00458-202ENST00000427299 ZAP70P43403 619 aa9.56□□□□□ -0.88
LINC00458-202ENST00000427299 HYAL2Q12891 473 aa9.56□□□□□ -0.88
LINC00458-202ENST00000427299 NAA30Q147X3 362 aaPredicted RBP9.56□□□□□ -0.88
LINC00458-202ENST00000427299 GTF3C3Q9Y5Q9 886 aa9.56□□□□□ -0.88
LINC00458-202ENST00000427299 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.55□□□□□ -0.88
LINC00458-202ENST00000427299 ATG7O95352 703 aa9.55□□□□□ -0.88
LINC00458-202ENST00000427299 GLB1P16278 677 aa9.55□□□□□ -0.88
LINC00458-202ENST00000427299 TMEM164Q5U3C3 297 aa9.55□□□□□ -0.88
LINC00458-202ENST00000427299 ADAMTSL4Q6UY14 1074 aa9.55□□□□□ -0.88
LINC00458-202ENST00000427299 UBL7Q96S82 380 aaPredicted RBP9.55□□□□□ -0.88
LINC00458-202ENST00000427299 LINC01387J3KSC0 135 aa9.54□□□□□ -0.88
LINC00458-202ENST00000427299 ZBTB39O15060 712 aa9.54□□□□□ -0.88
LINC00458-202ENST00000427299 KIF4AO95239 1232 aa9.54□□□□□ -0.88
LINC00458-202ENST00000427299 WISP1O95388 367 aa9.54□□□□□ -0.88
LINC00458-202ENST00000427299 CEP135Q66GS9 1140 aa9.54□□□□□ -0.88
LINC00458-202ENST00000427299 GPR152Q8TDT2 470 aa9.54□□□□□ -0.88
LINC00458-202ENST00000427299 STIM2Q9P246 746 aa9.54□□□□□ -0.88
LINC00458-202ENST00000427299 FNDC3AQ9Y2H6 1198 aaKnown RBP9.54□□□□□ -0.88
LINC00458-202ENST00000427299 SMNDC1O75940 238 aaKnown RBP eCLIP9.53□□□□□ -0.88
LINC00458-202ENST00000427299 CD97P48960 835 aa9.53□□□□□ -0.88
LINC00458-202ENST00000427299 TTC39BQ5VTQ0 682 aaPredicted RBP9.53□□□□□ -0.88
LINC00458-202ENST00000427299 TXNDC11Q6PKC3 985 aa9.53□□□□□ -0.88
LINC00458-202ENST00000427299 KRTAP19-1Q8IUB9 90 aa9.53□□□□□ -0.88
LINC00458-202ENST00000427299 SPACA7Q96KW9 195 aa9.53□□□□□ -0.88
LINC00458-202ENST00000427299 LACRTQ9GZZ8 138 aa9.53□□□□□ -0.88
LINC00458-202ENST00000427299 RASSF4Q9H2L5 321 aa9.53□□□□□ -0.88
LINC00458-202ENST00000427299 KCNK4Q9NYG8 393 aa9.53□□□□□ -0.88
LINC00458-202ENST00000427299 RAXQ9Y2V3 346 aa9.53□□□□□ -0.88
LINC00458-202ENST00000427299 CDC27P30260 824 aa9.52□□□□□ -0.89
LINC00458-202ENST00000427299 CD68P34810 354 aaPredicted RBP9.52□□□□□ -0.89
LINC00458-202ENST00000427299 SCNN1AP37088 669 aa9.52□□□□□ -0.89
LINC00458-202ENST00000427299 CLP1Q92989 425 aaKnown RBP9.52□□□□□ -0.89
LINC00458-202ENST00000427299 PCMTD2Q9NV79 361 aa9.52□□□□□ -0.89
LINC00458-202ENST00000427299 ABI2Q9NYB9 513 aaPredicted RBP9.52□□□□□ -0.89
LINC00458-202ENST00000427299 KRTAP9-9Q9BYP9 154 aa9.51□□□□□ -0.89
LINC00458-202ENST00000427299 KRTAP9-4Q9BYQ2 154 aa9.51□□□□□ -0.89
LINC00458-202ENST00000427299 CYP2E1P05181 493 aaPredicted RBP9.5□□□□□ -0.89
LINC00458-202ENST00000427299 SSTR4P31391 388 aa9.5□□□□□ -0.89
LINC00458-202ENST00000427299 ACAD11Q709F0 780 aa9.5□□□□□ -0.89
LINC00458-202ENST00000427299 ARMC10Q8N2F6 343 aa9.5□□□□□ -0.89
LINC00458-202ENST00000427299 CEP120Q8N960 986 aa9.5□□□□□ -0.89
LINC00458-202ENST00000427299 ABTB2Q8N961 1025 aa9.5□□□□□ -0.89
LINC00458-202ENST00000427299 CARD10Q9BWT7 1032 aa9.5□□□□□ -0.89
LINC00458-202ENST00000427299 PBX4Q9BYU1 374 aa9.5□□□□□ -0.89
LINC00458-202ENST00000427299 SLAIN2Q9P270 581 aa9.5□□□□□ -0.89
LINC00458-202ENST00000427299 FSCN2O14926 492 aa9.49□□□□□ -0.89
LINC00458-202ENST00000427299 GSC2O15499 205 aa9.49□□□□□ -0.89
LINC00458-202ENST00000427299 IGLV1-40P01703 118 aa9.49□□□□□ -0.89
LINC00458-202ENST00000427299 EPHA1P21709 976 aa9.49□□□□□ -0.89
LINC00458-202ENST00000427299 KIAA1211Q6ZU35 1233 aa9.49□□□□□ -0.89
LINC00458-202ENST00000427299 CEP41Q9BYV8 373 aa9.49□□□□□ -0.89
LINC00458-202ENST00000427299 STOML1Q9UBI4 398 aa9.49□□□□□ -0.89
LINC00458-202ENST00000427299 DHX15O43143 795 aaKnown RBP9.48□□□□□ -0.89
LINC00458-202ENST00000427299 UVSSAQ2YD98 709 aa9.48□□□□□ -0.89
LINC00458-202ENST00000427299 MCTP1Q6DN14 999 aa9.48□□□□□ -0.89
LINC00458-202ENST00000427299 PDE12Q6L8Q7 609 aaKnown RBP9.48□□□□□ -0.89
LINC00458-202ENST00000427299 KLHL23Q8NBE8 558 aa9.48□□□□□ -0.89
LINC00458-202ENST00000427299 TMEM63CQ9P1W3 806 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms