RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 XDHP47989 1333 aa13.66□□□□□ -0.22
LINC01238-202ENST00000426962 G3V3G9 751 aa13.66□□□□□ -0.22
LINC01238-202ENST00000426962 ALDH1L1O75891 902 aa13.66□□□□□ -0.22
LINC01238-202ENST00000426962 UFL1O94874 794 aa13.66□□□□□ -0.22
LINC01238-202ENST00000426962 ITGBL1O95965 494 aaPredicted RBP13.66□□□□□ -0.22
LINC01238-202ENST00000426962 ITGA6P23229 1130 aa13.66□□□□□ -0.22
LINC01238-202ENST00000426962 ATP2B4P23634 1241 aa13.66□□□□□ -0.22
LINC01238-202ENST00000426962 IGHMBP2P38935 993 aaKnown RBP13.66□□□□□ -0.22
LINC01238-202ENST00000426962 GMPSP49915 693 aaPredicted RBP13.66□□□□□ -0.22
LINC01238-202ENST00000426962 DOK7Q18PE1 504 aa13.66□□□□□ -0.22
LINC01238-202ENST00000426962 DCAF8Q5TAQ9 597 aa13.66□□□□□ -0.22
LINC01238-202ENST00000426962 SLC4A10Q6U841 1118 aa13.66□□□□□ -0.22
LINC01238-202ENST00000426962 CNTROBQ8N137 903 aa13.66□□□□□ -0.22
LINC01238-202ENST00000426962 BCL2L13Q9BXK5 485 aa13.66□□□□□ -0.22
LINC01238-202ENST00000426962 DBNDD1Q9H9R9 158 aa13.66□□□□□ -0.22
LINC01238-202ENST00000426962 ADARB2Q9NS39 739 aaKnown RBP13.66□□□□□ -0.22
LINC01238-202ENST00000426962 COL4A1P02462 1669 aa13.66□□□□□ -0.22
LINC01238-202ENST00000426962 LRRC37AA6NMS7 1700 aa13.65□□□□□ -0.22
LINC01238-202ENST00000426962 GRM8O00222 908 aa13.65□□□□□ -0.22
LINC01238-202ENST00000426962 ECE2O60344 883 aa13.65□□□□□ -0.22
LINC01238-202ENST00000426962 DIEXFQ68CQ4 756 aaKnown RBP13.65□□□□□ -0.22
LINC01238-202ENST00000426962 GPR101Q96P66 508 aaPredicted RBP13.65□□□□□ -0.22
LINC01238-202ENST00000426962 SRCIN1Q9C0H9 1055 aa13.65□□□□□ -0.22
LINC01238-202ENST00000426962 C9orf78Q9NZ63 289 aaPredicted RBP13.65□□□□□ -0.22
LINC01238-202ENST00000426962 DUOX1Q9NRD9 1551 aa13.65□□□□□ -0.22
LINC01238-202ENST00000426962 PASKQ96RG2 1323 aa13.64□□□□□ -0.23
LINC01238-202ENST00000426962 PSMD14O00487 310 aa13.64□□□□□ -0.23
LINC01238-202ENST00000426962 FOXO4P98177 505 aa13.64□□□□□ -0.23
LINC01238-202ENST00000426962 ALDH1L2Q3SY69 923 aa13.64□□□□□ -0.23
LINC01238-202ENST00000426962 MAP1SQ66K74 1059 aaPredicted RBP13.64□□□□□ -0.23
LINC01238-202ENST00000426962 SSH1Q8WYL5 1049 aa13.64□□□□□ -0.23
LINC01238-202ENST00000426962 DPF2Q92785 391 aa13.64□□□□□ -0.23
LINC01238-202ENST00000426962 MPHOSPH8Q99549 860 aa13.64□□□□□ -0.23
LINC01238-202ENST00000426962 KCNQ5Q9NR82 932 aa13.64□□□□□ -0.23
LINC01238-202ENST00000426962 CREBZFQ9NS37 354 aa13.64□□□□□ -0.23
LINC01238-202ENST00000426962 CNOT7Q9UIV1 285 aaKnown RBP13.64□□□□□ -0.23
LINC01238-202ENST00000426962 PTPRCP08575 1304 aa13.64□□□□□ -0.23
LINC01238-202ENST00000426962 ANKRD18BA2A2Z9 1011 aa13.63□□□□□ -0.23
LINC01238-202ENST00000426962 H7C1D1 291 aa13.63□□□□□ -0.23
LINC01238-202ENST00000426962 CT47B1P0C2W7 299 aaPredicted RBP13.63□□□□□ -0.23
LINC01238-202ENST00000426962 FAM161AQ3B820 660 aa13.63□□□□□ -0.23
LINC01238-202ENST00000426962 MIER1Q8N108 512 aa13.63□□□□□ -0.23
LINC01238-202ENST00000426962 LEMD3Q9Y2U8 911 aa13.63□□□□□ -0.23
LINC01238-202ENST00000426962 ZBTB12Q9Y330 459 aaPredicted RBP13.63□□□□□ -0.23
LINC01238-202ENST00000426962 TMEM88BA6NKF7 163 aa13.62□□□□□ -0.23
LINC01238-202ENST00000426962 VIL1P09327 827 aaKnown RBP13.62□□□□□ -0.23
LINC01238-202ENST00000426962 RPS12P25398 132 aaKnown RBP13.62□□□□□ -0.23
LINC01238-202ENST00000426962 CCT4P50991 539 aaKnown RBP13.62□□□□□ -0.23
LINC01238-202ENST00000426962 IFIT5Q13325 482 aaKnown RBP13.62□□□□□ -0.23
LINC01238-202ENST00000426962 LMBR1LQ6UX01 489 aa13.62□□□□□ -0.23
LINC01238-202ENST00000426962 PODNQ7Z5L7 613 aa13.62□□□□□ -0.23
LINC01238-202ENST00000426962 JMYQ8N9B5 988 aa13.62□□□□□ -0.23
LINC01238-202ENST00000426962 ANKRD2Q9GZV1 360 aa13.62□□□□□ -0.23
LINC01238-202ENST00000426962 WTIPA6NIX2 430 aaPredicted RBP13.61□□□□□ -0.23
LINC01238-202ENST00000426962 CCDC57Q2TAC2 916 aa13.61□□□□□ -0.23
LINC01238-202ENST00000426962 EPHA10Q5JZY3 1008 aa13.61□□□□□ -0.23
LINC01238-202ENST00000426962 ZC3H15Q8WU90 426 aaKnown RBP13.61□□□□□ -0.23
LINC01238-202ENST00000426962 PGAP2Q9UHJ9 254 aa13.61□□□□□ -0.23
LINC01238-202ENST00000426962 CHMP3Q9Y3E7 222 aa13.61□□□□□ -0.23
LINC01238-202ENST00000426962 LTBP1Q14766 1721 aa13.61□□□□□ -0.23
LINC01238-202ENST00000426962 HIRAP54198 1017 aaPredicted RBP13.6□□□□□ -0.23
LINC01238-202ENST00000426962 MICALL2Q8IY33 904 aa13.6□□□□□ -0.23
LINC01238-202ENST00000426962 SMC4Q9NTJ3 1288 aa13.6□□□□□ -0.23
LINC01238-202ENST00000426962 UTYO14607 1347 aa13.6□□□□□ -0.23
LINC01238-202ENST00000426962 MYH3P11055 1940 aa13.59□□□□□ -0.23
LINC01238-202ENST00000426962 ADAMTSL1Q8N6G6 1762 aa13.59□□□□□ -0.23
LINC01238-202ENST00000426962 SHTN1A0MZ66 631 aa13.59□□□□□ -0.23
LINC01238-202ENST00000426962 NBPF7P0C2Y1 421 aaPredicted RBP13.59□□□□□ -0.23
LINC01238-202ENST00000426962 CHRNDQ07001 517 aa13.59□□□□□ -0.23
LINC01238-202ENST00000426962 ZNF804BA4D1E1 1349 aa13.59□□□□□ -0.23
LINC01238-202ENST00000426962 MED23Q9ULK4 1368 aa13.58□□□□□ -0.23
LINC01238-202ENST00000426962 USP17L3A6NCW0 530 aa13.58□□□□□ -0.24
LINC01238-202ENST00000426962 USP17L4A6NCW7 530 aa13.58□□□□□ -0.24
LINC01238-202ENST00000426962 BRPF1P55201 1214 aaPredicted RBP13.58□□□□□ -0.24
LINC01238-202ENST00000426962 TAF7LQ5H9L4 462 aa13.58□□□□□ -0.24
LINC01238-202ENST00000426962 RSBN1LQ6PCB5 846 aaPredicted RBP13.58□□□□□ -0.24
LINC01238-202ENST00000426962 LDHAL6AQ6ZMR3 332 aa13.58□□□□□ -0.24
LINC01238-202ENST00000426962 USP17L1Q7RTZ2 530 aa13.58□□□□□ -0.24
LINC01238-202ENST00000426962 SAMD7Q7Z3H4 446 aa13.58□□□□□ -0.24
LINC01238-202ENST00000426962 AGBL3Q8NEM8 1001 aa13.58□□□□□ -0.24
LINC01238-202ENST00000426962 TRPM4Q8TD43 1214 aa13.58□□□□□ -0.24
LINC01238-202ENST00000426962 SUCLG2Q96I99 432 aa13.58□□□□□ -0.24
LINC01238-202ENST00000426962 COA1Q9GZY4 146 aa13.58□□□□□ -0.24
LINC01238-202ENST00000426962 KCNJ4P48050 445 aa13.57□□□□□ -0.24
LINC01238-202ENST00000426962 CDC37L1Q7L3B6 337 aa13.57□□□□□ -0.24
LINC01238-202ENST00000426962 TXNRD3Q86VQ6 643 aa13.57□□□□□ -0.24
LINC01238-202ENST00000426962 KAZALD1Q96I82 304 aa13.57□□□□□ -0.24
LINC01238-202ENST00000426962 ZNF594Q96JF6 807 aaPredicted RBP13.57□□□□□ -0.24
LINC01238-202ENST00000426962 MKRN1Q9UHC7 482 aaKnown RBP13.57□□□□□ -0.24
LINC01238-202ENST00000426962 NOB1Q9ULX3 412 aaKnown RBP13.57□□□□□ -0.24
LINC01238-202ENST00000426962 TRAF5O00463 557 aa13.56□□□□□ -0.24
LINC01238-202ENST00000426962 TAF5LO75529 589 aa13.56□□□□□ -0.24
LINC01238-202ENST00000426962 FMR1Q06787 632 aaKnown RBP eCLIP13.56□□□□□ -0.24
LINC01238-202ENST00000426962 TBC1D10BQ4KMP7 808 aaPredicted RBP13.56□□□□□ -0.24
LINC01238-202ENST00000426962 RBM26Q5T8P6 1007 aaKnown RBP13.56□□□□□ -0.24
LINC01238-202ENST00000426962 HELBQ8NG08 1087 aaPredicted RBP13.56□□□□□ -0.24
LINC01238-202ENST00000426962 USP44Q9H0E7 712 aa13.56□□□□□ -0.24
LINC01238-202ENST00000426962 CNNM1Q9NRU3 951 aa13.56□□□□□ -0.24
LINC01238-202ENST00000426962 RARSP54136 660 aaKnown RBP13.55□□□□□ -0.24
LINC01238-202ENST00000426962 ZNF280AP59817 542 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms