RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 SLF2Q8IX21 1173 aa22.67■■□□□ 1.22
HCG18-235ENST00000426882 ESR2Q92731 530 aa22.67■■□□□ 1.22
HCG18-235ENST00000426882 C6orf229H3BNL8 230 aa22.67■■□□□ 1.22
HCG18-235ENST00000426882 PPP1R12BO60237 982 aaPredicted RBP22.67■■□□□ 1.22
HCG18-235ENST00000426882 BAG3O95817 575 aa22.67■■□□□ 1.22
HCG18-235ENST00000426882 SKILP12757 684 aa22.67■■□□□ 1.22
HCG18-235ENST00000426882 PRDM10Q9NQV6 1147 aa22.67■■□□□ 1.22
HCG18-235ENST00000426882 PRKCSHP14314 528 aaPredicted RBP22.67■■□□□ 1.22
HCG18-235ENST00000426882 MAGI2Q86UL8 1455 aa22.67■■□□□ 1.22
HCG18-235ENST00000426882 UBASH3AP57075 661 aa22.66■■□□□ 1.22
HCG18-235ENST00000426882 C19orf44Q9H6X5 657 aa22.66■■□□□ 1.22
HCG18-235ENST00000426882 VAT1LQ9HCJ6 419 aa22.66■■□□□ 1.22
HCG18-235ENST00000426882 FGFR1OPO95684 399 aaKnown RBP22.66■■□□□ 1.22
HCG18-235ENST00000426882 IDEP14735 1019 aa22.66■■□□□ 1.22
HCG18-235ENST00000426882 MTIF2P46199 727 aaKnown RBP22.66■■□□□ 1.22
HCG18-235ENST00000426882 JAKMIP3Q5VZ66 844 aa22.66■■□□□ 1.22
HCG18-235ENST00000426882 AOPEPQ8N6M6 819 aa22.66■■□□□ 1.22
HCG18-235ENST00000426882 CRNKL1Q9BZJ0 848 aaKnown RBP22.66■■□□□ 1.22
HCG18-235ENST00000426882 USP19O94966 1318 aa22.66■■□□□ 1.22
HCG18-235ENST00000426882 PTPDC1A2A3K4 754 aa22.66■■□□□ 1.22
HCG18-235ENST00000426882 CCDC12Q8WUD4 166 aaPredicted RBP22.66■■□□□ 1.22
HCG18-235ENST00000426882 HOXB7P09629 217 aa22.66■■□□□ 1.22
HCG18-235ENST00000426882 KDM6BO15054 1643 aa22.66■■□□□ 1.22
HCG18-235ENST00000426882 MBD5Q9P267 1494 aa22.66■■□□□ 1.22
HCG18-235ENST00000426882 SPTLC2O15270 562 aa22.65■■□□□ 1.22
HCG18-235ENST00000426882 PYM1Q9BRP8 204 aaKnown RBP22.65■■□□□ 1.22
HCG18-235ENST00000426882 UBA5Q9GZZ9 404 aa22.65■■□□□ 1.22
HCG18-235ENST00000426882 PAXBP1Q9Y5B6 917 aa22.65■■□□□ 1.22
HCG18-235ENST00000426882 GOLGA6L9A6NEM1 432 aa22.65■■□□□ 1.22
HCG18-235ENST00000426882 IL2RBP14784 551 aa22.65■■□□□ 1.22
HCG18-235ENST00000426882 SPTY2D1Q68D10 685 aaPredicted RBP22.65■■□□□ 1.22
HCG18-235ENST00000426882 ANKRD18AQ8IVF6 992 aa22.65■■□□□ 1.22
HCG18-235ENST00000426882 LGR6Q9HBX8 967 aa22.65■■□□□ 1.22
HCG18-235ENST00000426882 STX8Q9UNK0 236 aa22.65■■□□□ 1.22
HCG18-235ENST00000426882 ADGBQ8N7X0 1667 aa22.64■■□□□ 1.22
HCG18-235ENST00000426882 ENOX2Q16206 610 aaKnown RBP22.64■■□□□ 1.21
HCG18-235ENST00000426882 HSP90AA4PQ58FG1 418 aa22.64■■□□□ 1.21
HCG18-235ENST00000426882 KIAA0754O94854 1291 aa22.64■■□□□ 1.21
HCG18-235ENST00000426882 CALML4Q96GE6 196 aa22.64■■□□□ 1.21
HCG18-235ENST00000426882 GNG11P61952 73 aa22.63■■□□□ 1.21
HCG18-235ENST00000426882 HS1BP3Q53T59 392 aa22.63■■□□□ 1.21
HCG18-235ENST00000426882 CEP170Q5SW79 1584 aa22.63■■□□□ 1.21
HCG18-235ENST00000426882 TDRD12Q587J7 1177 aaKnown RBP22.63■■□□□ 1.21
HCG18-235ENST00000426882 ZNF790Q6PG37 636 aa22.63■■□□□ 1.21
HCG18-235ENST00000426882 N4BP3O15049 544 aa22.63■■□□□ 1.21
HCG18-235ENST00000426882 SGSM2O43147 1006 aa22.63■■□□□ 1.21
HCG18-235ENST00000426882 USO1O60763 962 aaKnown RBP22.63■■□□□ 1.21
HCG18-235ENST00000426882 NBPF7P0C2Y1 421 aaPredicted RBP22.63■■□□□ 1.21
HCG18-235ENST00000426882 IFIT1BQ5T764 474 aaKnown RBP22.63■■□□□ 1.21
HCG18-235ENST00000426882 ARHGEF5Q12774 1597 aa22.63■■□□□ 1.21
HCG18-235ENST00000426882 AFMP43652 599 aa22.63■■□□□ 1.21
HCG18-235ENST00000426882 PPP4R3BQ5MIZ7 849 aa22.63■■□□□ 1.21
HCG18-235ENST00000426882 NBPF6Q5VWK0 638 aa22.63■■□□□ 1.21
HCG18-235ENST00000426882 NBPF5PQ86XG9 351 aaPredicted RBP22.63■■□□□ 1.21
HCG18-235ENST00000426882 NBPF4Q96M43 638 aa22.63■■□□□ 1.21
HCG18-235ENST00000426882 SBNO2Q9Y2G9 1366 aa22.62■■□□□ 1.21
HCG18-235ENST00000426882 AMPD3Q01432 767 aa22.62■■□□□ 1.21
HCG18-235ENST00000426882 HELBQ8NG08 1087 aaPredicted RBP22.62■■□□□ 1.21
HCG18-235ENST00000426882 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.62■■□□□ 1.214e-7■■■■■ 57.7
HCG18-235ENST00000426882 KLHDC4Q8TBB5 520 aa22.62■■□□□ 1.21
HCG18-235ENST00000426882 SNX14Q9Y5W7 946 aa22.62■■□□□ 1.21
HCG18-235ENST00000426882 AOX1Q06278 1338 aa22.62■■□□□ 1.21
HCG18-235ENST00000426882 RTL1A6NKG5 1358 aa22.62■■□□□ 1.21
HCG18-235ENST00000426882 BMP15O95972 392 aa22.62■■□□□ 1.21
HCG18-235ENST00000426882 HMGB2P26583 209 aaKnown RBP22.62■■□□□ 1.21
HCG18-235ENST00000426882 PKNOX2Q96KN3 472 aa22.62■■□□□ 1.21
HCG18-235ENST00000426882 KIF20AO95235 890 aa22.61■■□□□ 1.21
HCG18-235ENST00000426882 ATP6V1AP38606 617 aa22.61■■□□□ 1.21
HCG18-235ENST00000426882 MAP9Q49MG5 647 aa22.61■■□□□ 1.21
HCG18-235ENST00000426882 TIMM10P62072 90 aa22.61■■□□□ 1.21
HCG18-235ENST00000426882 PHF23Q9BUL5 403 aaPredicted RBP22.61■■□□□ 1.21
HCG18-235ENST00000426882 NIP7Q9Y221 180 aaKnown RBP eCLIP22.6■■□□□ 1.21
HCG18-235ENST00000426882 ABCC4O15439 1325 aa22.6■■□□□ 1.21
HCG18-235ENST00000426882 DNA2P51530 1060 aa22.6■■□□□ 1.21
HCG18-235ENST00000426882 SF3B2Q13435 895 aaKnown RBP22.6■■□□□ 1.21
HCG18-235ENST00000426882 NAA16Q6N069 864 aaPredicted RBP22.6■■□□□ 1.21
HCG18-235ENST00000426882 ACSBG1Q96GR2 724 aa22.6■■□□□ 1.21
HCG18-235ENST00000426882 LMOD1P29536 600 aaPredicted RBP22.6■■□□□ 1.21
HCG18-235ENST00000426882 DZIP3Q86Y13 1208 aaKnown RBP22.6■■□□□ 1.21
HCG18-235ENST00000426882 CCDC191Q8NCU4 936 aa22.6■■□□□ 1.21
HCG18-235ENST00000426882 SIRT1Q96EB6 747 aa22.6■■□□□ 1.21
HCG18-235ENST00000426882 RBSNQ9H1K0 784 aa22.6■■□□□ 1.21
HCG18-235ENST00000426882 IRS4O14654 1257 aaPredicted RBP22.6■■□□□ 1.21
HCG18-235ENST00000426882 PAFAH1B1P43034 410 aa22.59■■□□□ 1.21
HCG18-235ENST00000426882 VPS36Q86VN1 386 aa22.59■■□□□ 1.21
HCG18-235ENST00000426882 TRMT2AQ8IZ69 625 aaKnown RBP22.59■■□□□ 1.21
HCG18-235ENST00000426882 METTL22Q9BUU2 404 aaPredicted RBP22.59■■□□□ 1.21
HCG18-235ENST00000426882 DBNDD2Q9BQY9 259 aa22.59■■□□□ 1.21
HCG18-235ENST00000426882 NEFHP12036 1026 aa22.59■■□□□ 1.21
HCG18-235ENST00000426882 RPS6KB1P23443 525 aa22.59■■□□□ 1.21
HCG18-235ENST00000426882 SLC27A2O14975 620 aa22.58■■□□□ 1.21
HCG18-235ENST00000426882 POLR3GO15318 223 aaPredicted RBP22.58■■□□□ 1.21
HCG18-235ENST00000426882 CCDC129Q6ZRS4 1044 aa22.58■■□□□ 1.21
HCG18-235ENST00000426882 KIAA0232Q92628 1395 aa22.58■■□□□ 1.21
HCG18-235ENST00000426882 TNNI3KQ59H18 835 aa22.58■■□□□ 1.21
HCG18-235ENST00000426882 TAX1BP1Q86VP1 789 aa22.58■■□□□ 1.21
HCG18-235ENST00000426882 TRIM47Q96LD4 638 aa22.58■■□□□ 1.21
HCG18-235ENST00000426882 FAM227BQ96M60 508 aa22.58■■□□□ 1.21
HCG18-235ENST00000426882 FPGT-TNNI3KV9GXZ4 949 aa22.58■■□□□ 1.21
HCG18-235ENST00000426882 ATP10AO60312 1499 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms