RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 PHF8Q9UPP1 1060 aa11.94□□□□□ -0.5
CTCFL-206ENST00000426658 GOLIM4O00461 696 aa11.93□□□□□ -0.5
CTCFL-206ENST00000426658 Q6ZUG5 572 aa11.93□□□□□ -0.5
CTCFL-206ENST00000426658 MRFAP1L1Q96HT8 127 aa11.93□□□□□ -0.5
CTCFL-206ENST00000426658 SBNO1A3KN83 1393 aa11.93□□□□□ -0.5
CTCFL-206ENST00000426658 A0A087WWV3 80 aa11.93□□□□□ -0.5
CTCFL-206ENST00000426658 CDC25BP30305 580 aa11.93□□□□□ -0.5
CTCFL-206ENST00000426658 TMCO3Q6UWJ1 677 aa11.93□□□□□ -0.5
CTCFL-206ENST00000426658 TRERF1Q96PN7 1200 aa11.93□□□□□ -0.5
CTCFL-206ENST00000426658 TMX1Q9H3N1 280 aa11.93□□□□□ -0.5
CTCFL-206ENST00000426658 G3V3G9 751 aa11.93□□□□□ -0.5
CTCFL-206ENST00000426658 PES1O00541 588 aaKnown RBP11.93□□□□□ -0.5
CTCFL-206ENST00000426658 TNNT3P45378 269 aaPredicted RBP11.93□□□□□ -0.5
CTCFL-206ENST00000426658 TRDNQ13061 729 aa11.93□□□□□ -0.5
CTCFL-206ENST00000426658 BEND3Q5T5X7 828 aa11.93□□□□□ -0.5
CTCFL-206ENST00000426658 DCAF8Q5TAQ9 597 aa11.93□□□□□ -0.5
CTCFL-206ENST00000426658 BICC1Q9H694 974 aaKnown RBP11.93□□□□□ -0.5
CTCFL-206ENST00000426658 MORC2Q9Y6X9 1032 aaPredicted RBP11.93□□□□□ -0.5
CTCFL-206ENST00000426658 HSP90AA4PQ58FG1 418 aa11.92□□□□□ -0.5
CTCFL-206ENST00000426658 TTLL5Q6EMB2 1281 aa11.92□□□□□ -0.5
CTCFL-206ENST00000426658 TTC21AQ8NDW8 1320 aa11.92□□□□□ -0.5
CTCFL-206ENST00000426658 A0A087WZG4 1122 aa11.92□□□□□ -0.5
CTCFL-206ENST00000426658 GRM8O00222 908 aa11.92□□□□□ -0.5
CTCFL-206ENST00000426658 TERF2Q15554 542 aa11.92□□□□□ -0.5
CTCFL-206ENST00000426658 SYT10Q6XYQ8 523 aa11.92□□□□□ -0.5
CTCFL-206ENST00000426658 C11orf57Q6ZUT1 292 aaPredicted RBP11.92□□□□□ -0.5
CTCFL-206ENST00000426658 CHMP4CQ96CF2 233 aa11.92□□□□□ -0.5
CTCFL-206ENST00000426658 PGBD1Q96JS3 809 aa11.92□□□□□ -0.5
CTCFL-206ENST00000426658 WWC3Q9ULE0 1092 aa11.92□□□□□ -0.5
CTCFL-206ENST00000426658 A0A0D9SFI3 127 aa11.92□□□□□ -0.5
CTCFL-206ENST00000426658 USP27XA6NNY8 438 aa11.92□□□□□ -0.5
CTCFL-206ENST00000426658 CCP110O43303 1012 aa11.92□□□□□ -0.5
CTCFL-206ENST00000426658 KCNA6P17658 529 aa11.92□□□□□ -0.5
CTCFL-206ENST00000426658 GTF3C6Q969F1 213 aa11.92□□□□□ -0.5
CTCFL-206ENST00000426658 BABAM1Q9NWV8 329 aa11.92□□□□□ -0.5
CTCFL-206ENST00000426658 PLEKHG3A1L390 1219 aa11.91□□□□□ -0.5
CTCFL-206ENST00000426658 POLR3GO15318 223 aaPredicted RBP11.91□□□□□ -0.5
CTCFL-206ENST00000426658 GPS2Q13227 327 aa11.91□□□□□ -0.5
CTCFL-206ENST00000426658 KMT5BQ4FZB7 885 aa11.91□□□□□ -0.5
CTCFL-206ENST00000426658 COPS6Q7L5N1 327 aa11.91□□□□□ -0.5
CTCFL-206ENST00000426658 CCDC150Q8NCX0 1101 aa11.91□□□□□ -0.5
CTCFL-206ENST00000426658 XAGE3Q8WTP9 111 aa11.91□□□□□ -0.5
CTCFL-206ENST00000426658 DLC1Q96QB1 1528 aa11.91□□□□□ -0.5
CTCFL-206ENST00000426658 URI1O94763 535 aaPredicted RBP11.91□□□□□ -0.5
CTCFL-206ENST00000426658 SERPINC1P01008 464 aa11.91□□□□□ -0.5
CTCFL-206ENST00000426658 DHX8Q14562 1220 aaKnown RBP11.91□□□□□ -0.5
CTCFL-206ENST00000426658 HSP90AB3PQ58FF7 597 aa11.91□□□□□ -0.5
CTCFL-206ENST00000426658 RRP12Q5JTH9 1297 aaKnown RBP11.91□□□□□ -0.5
CTCFL-206ENST00000426658 FBXO38Q6PIJ6 1188 aa11.91□□□□□ -0.5
CTCFL-206ENST00000426658 U3KPZ7 1027 aaPredicted RBP11.91□□□□□ -0.5
CTCFL-206ENST00000426658 IGSF1Q8N6C5 1336 aa11.9□□□□□ -0.5
CTCFL-206ENST00000426658 ALDH1L1O75891 902 aa11.9□□□□□ -0.5
CTCFL-206ENST00000426658 LTKP29376 864 aa11.9□□□□□ -0.5
CTCFL-206ENST00000426658 ARHGAP29Q52LW3 1261 aa11.9□□□□□ -0.5
CTCFL-206ENST00000426658 CCDC82Q8N4S0 544 aa11.9□□□□□ -0.5
CTCFL-206ENST00000426658 TNRQ92752 1358 aa11.9□□□□□ -0.5
CTCFL-206ENST00000426658 CLTCQ00610 1675 aaKnown RBP11.9□□□□□ -0.5
CTCFL-206ENST00000426658 NEO1Q92859 1461 aa11.9□□□□□ -0.5
CTCFL-206ENST00000426658 ST3GAL1Q11201 340 aa11.9□□□□□ -0.5
CTCFL-206ENST00000426658 TRIM29Q14134 588 aa11.9□□□□□ -0.5
CTCFL-206ENST00000426658 C8orf37Q96NL8 207 aa11.9□□□□□ -0.5
CTCFL-206ENST00000426658 PRAMEF22A3QJZ6 481 aa11.9□□□□□ -0.5
CTCFL-206ENST00000426658 ERCC6LQ2NKX8 1250 aa11.9□□□□□ -0.5
CTCFL-206ENST00000426658 CPLX2Q6PUV4 134 aaKnown RBP11.9□□□□□ -0.5
CTCFL-206ENST00000426658 SIRT1Q96EB6 747 aa11.9□□□□□ -0.5
CTCFL-206ENST00000426658 NCOA5Q9HCD5 579 aaKnown RBP11.9□□□□□ -0.5
CTCFL-206ENST00000426658 DNAI1Q9UI46 699 aa11.9□□□□□ -0.5
CTCFL-206ENST00000426658 FAM160A1Q05DH4 1040 aa11.89□□□□□ -0.51
CTCFL-206ENST00000426658 PROSER3Q2NL68 480 aa11.89□□□□□ -0.51
CTCFL-206ENST00000426658 NBPF6Q5VWK0 638 aa11.89□□□□□ -0.51
CTCFL-206ENST00000426658 KSR2Q6VAB6 950 aa11.89□□□□□ -0.51
CTCFL-206ENST00000426658 EAF2Q96CJ1 260 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-206ENST00000426658 NBPF4Q96M43 638 aa11.89□□□□□ -0.51
CTCFL-206ENST00000426658 IFNKQ9P0W0 207 aa11.89□□□□□ -0.51
CTCFL-206ENST00000426658 APOBRQ0VD83 1088 aa11.89□□□□□ -0.51
CTCFL-206ENST00000426658 SIGLEC1Q9BZZ2 1709 aa11.89□□□□□ -0.51
CTCFL-206ENST00000426658 SARM1Q6SZW1 724 aa11.89□□□□□ -0.51
CTCFL-206ENST00000426658 MRPS27Q92552 414 aaKnown RBP11.89□□□□□ -0.51
CTCFL-206ENST00000426658 SUCLG2Q96I99 432 aa11.89□□□□□ -0.51
CTCFL-206ENST00000426658 ZBTB3Q9H5J0 574 aa11.89□□□□□ -0.51
CTCFL-206ENST00000426658 TLR7Q9NYK1 1049 aaKnown RBP11.89□□□□□ -0.51
CTCFL-206ENST00000426658 TCHHQ07283 1943 aa11.89□□□□□ -0.51
CTCFL-206ENST00000426658 SLFN14P0C7P3 912 aa11.88□□□□□ -0.51
CTCFL-206ENST00000426658 EIF4A1P60842 406 aaKnown RBP11.88□□□□□ -0.51
CTCFL-206ENST00000426658 RESTQ13127 1097 aa11.88□□□□□ -0.51
CTCFL-206ENST00000426658 SF3B2Q13435 895 aaKnown RBP11.88□□□□□ -0.51
CTCFL-206ENST00000426658 KRT28Q7Z3Y7 464 aa11.88□□□□□ -0.51
CTCFL-206ENST00000426658 SEC62Q99442 399 aaKnown RBP11.88□□□□□ -0.51
CTCFL-206ENST00000426658 TMX4Q9H1E5 349 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-206ENST00000426658 DLG5Q8TDM6 1919 aa11.88□□□□□ -0.51
CTCFL-206ENST00000426658 TATP17735 454 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-206ENST00000426658 CABP4P57796 275 aa11.88□□□□□ -0.51
CTCFL-206ENST00000426658 TOB2Q14106 344 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-206ENST00000426658 OTUD7BQ6GQQ9 843 aa11.88□□□□□ -0.51
CTCFL-206ENST00000426658 PTPDC1A2A3K4 754 aa11.88□□□□□ -0.51
CTCFL-206ENST00000426658 SLC3A2P08195 630 aaKnown RBP11.88□□□□□ -0.51
CTCFL-206ENST00000426658 RASSF8Q8NHQ8 419 aa11.88□□□□□ -0.51
CTCFL-206ENST00000426658 TMEM131LA2VDJ0 1609 aa11.88□□□□□ -0.51
CTCFL-206ENST00000426658 USP6P35125 1406 aa11.88□□□□□ -0.51
CTCFL-206ENST00000426658 HMGB1P09429 215 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms