RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 SPAG5Q96R06 1193 aa20.48■□□□□ 0.87
ARHGEF28-203ENST00000426542 PABPN1LA6NDY0 278 aaKnown RBP20.48■□□□□ 0.87
ARHGEF28-203ENST00000426542 RGS22Q8NE09 1264 aa20.48■□□□□ 0.87
ARHGEF28-203ENST00000426542 ZGPATQ8N5A5 531 aaKnown RBP20.48■□□□□ 0.87
ARHGEF28-203ENST00000426542 PPP1R14CQ8TAE6 165 aa20.48■□□□□ 0.87
ARHGEF28-203ENST00000426542 SETDB2Q96T68 719 aa20.48■□□□□ 0.87
ARHGEF28-203ENST00000426542 FAM107BQ9H098 131 aa20.48■□□□□ 0.87
ARHGEF28-203ENST00000426542 BMP15O95972 392 aa20.48■□□□□ 0.87
ARHGEF28-203ENST00000426542 FERP16591 822 aa20.48■□□□□ 0.87
ARHGEF28-203ENST00000426542 COPS6Q7L5N1 327 aa20.47■□□□□ 0.87
ARHGEF28-203ENST00000426542 BBXQ8WY36 941 aaPredicted RBP20.47■□□□□ 0.87
ARHGEF28-203ENST00000426542 PPM1EQ8WY54 764 aa20.47■□□□□ 0.87
ARHGEF28-203ENST00000426542 RNF216Q9NWF9 866 aaPredicted RBP20.47■□□□□ 0.87
ARHGEF28-203ENST00000426542 CALCOCO1Q9P1Z2 691 aa20.47■□□□□ 0.87
ARHGEF28-203ENST00000426542 PAXBP1Q9Y5B6 917 aa20.47■□□□□ 0.87
ARHGEF28-203ENST00000426542 KRT13P13646 458 aa20.47■□□□□ 0.87
ARHGEF28-203ENST00000426542 PHACTR2O75167 634 aa20.47■□□□□ 0.87
ARHGEF28-203ENST00000426542 MARCKSP29966 332 aaPredicted RBP20.47■□□□□ 0.87
ARHGEF28-203ENST00000426542 CYLC1P35663 651 aaPredicted RBP20.47■□□□□ 0.87
ARHGEF28-203ENST00000426542 TTC16Q8NEE8 873 aa20.47■□□□□ 0.87
ARHGEF28-203ENST00000426542 ZCRB1Q8TBF4 217 aaKnown RBP20.47■□□□□ 0.87
ARHGEF28-203ENST00000426542 CKAP4Q07065 602 aaKnown RBP20.47■□□□□ 0.87
ARHGEF28-203ENST00000426542 NAA16Q6N069 864 aaPredicted RBP20.47■□□□□ 0.87
ARHGEF28-203ENST00000426542 A0A1W2PRG0 241 aa20.46■□□□□ 0.87
ARHGEF28-203ENST00000426542 NAPAP54920 295 aa20.46■□□□□ 0.87
ARHGEF28-203ENST00000426542 USP48Q86UV5 1035 aa20.46■□□□□ 0.87
ARHGEF28-203ENST00000426542 SLC39A6Q13433 755 aa20.46■□□□□ 0.87
ARHGEF28-203ENST00000426542 ZNF830Q96NB3 372 aaPredicted RBP20.46■□□□□ 0.87
ARHGEF28-203ENST00000426542 ESYT1Q9BSJ8 1104 aa20.46■□□□□ 0.87
ARHGEF28-203ENST00000426542 CCDC171Q6TFL3 1326 aa20.46■□□□□ 0.87
ARHGEF28-203ENST00000426542 HDAC1Q13547 482 aaPredicted RBP20.46■□□□□ 0.87
ARHGEF28-203ENST00000426542 PDE1AP54750 535 aa20.46■□□□□ 0.87
ARHGEF28-203ENST00000426542 MRPS27Q92552 414 aaKnown RBP20.46■□□□□ 0.87
ARHGEF28-203ENST00000426542 CCDC155Q8N6L0 562 aa20.45■□□□□ 0.86
ARHGEF28-203ENST00000426542 CA8P35219 290 aa20.45■□□□□ 0.86
ARHGEF28-203ENST00000426542 MRVI1Q9Y6F6 885 aa20.45■□□□□ 0.86
ARHGEF28-203ENST00000426542 GRIPAP1Q4V328 841 aa20.45■□□□□ 0.86
ARHGEF28-203ENST00000426542 ZNF354CQ86Y25 554 aa20.45■□□□□ 0.86
ARHGEF28-203ENST00000426542 ASIC1P78348 528 aa20.45■□□□□ 0.86
ARHGEF28-203ENST00000426542 BMS1Q14692 1282 aaKnown RBP20.45■□□□□ 0.86
ARHGEF28-203ENST00000426542 SLC9C2Q5TAH2 1124 aa20.45■□□□□ 0.86
ARHGEF28-203ENST00000426542 HDAC9Q9UKV0 1011 aa20.45■□□□□ 0.86
ARHGEF28-203ENST00000426542 CALM1P0DP23 149 aa20.45■□□□□ 0.86
ARHGEF28-203ENST00000426542 CALM2P0DP24 149 aa20.45■□□□□ 0.86
ARHGEF28-203ENST00000426542 CALM3P0DP25 149 aa20.45■□□□□ 0.86
ARHGEF28-203ENST00000426542 USP37Q86T82 979 aa20.45■□□□□ 0.86
ARHGEF28-203ENST00000426542 GRM8O00222 908 aa20.44■□□□□ 0.86
ARHGEF28-203ENST00000426542 LMBR1LQ6UX01 489 aa20.44■□□□□ 0.86
ARHGEF28-203ENST00000426542 UTP14AQ9BVJ6 771 aaKnown RBP20.44■□□□□ 0.86
ARHGEF28-203ENST00000426542 PLVAPQ9BX97 442 aa20.44■□□□□ 0.86
ARHGEF28-203ENST00000426542 SMARCC2Q8TAQ2 1214 aa20.44■□□□□ 0.86
ARHGEF28-203ENST00000426542 ARHGAP45Q92619 1136 aa20.44■□□□□ 0.86
ARHGEF28-203ENST00000426542 AOPEPQ8N6M6 819 aa20.44■□□□□ 0.86
ARHGEF28-203ENST00000426542 MAGEB6P1A0A0J9YX57 407 aa20.44■□□□□ 0.86
ARHGEF28-203ENST00000426542 PTGS1P23219 599 aa20.44■□□□□ 0.86
ARHGEF28-203ENST00000426542 GNAQP50148 359 aa20.43■□□□□ 0.86
ARHGEF28-203ENST00000426542 NMIQ13287 307 aaPredicted RBP20.43■□□□□ 0.86
ARHGEF28-203ENST00000426542 DHX58Q96C10 678 aa20.43■□□□□ 0.86
ARHGEF28-203ENST00000426542 SELENOOQ9BVL4 669 aa20.43■□□□□ 0.86
ARHGEF28-203ENST00000426542 SERPINA10Q9UK55 444 aa20.43■□□□□ 0.86
ARHGEF28-203ENST00000426542 SSX2IPQ9Y2D8 614 aa20.43■□□□□ 0.86
ARHGEF28-203ENST00000426542 SBNO2Q9Y2G9 1366 aa20.43■□□□□ 0.86
ARHGEF28-203ENST00000426542 ATP2C2O75185 946 aa20.42■□□□□ 0.86
ARHGEF28-203ENST00000426542 NLRP3Q96P20 1036 aa20.42■□□□□ 0.86
ARHGEF28-203ENST00000426542 PAIP2Q9BPZ3 127 aaKnown RBP20.42■□□□□ 0.86
ARHGEF28-203ENST00000426542 NIP7Q9Y221 180 aaKnown RBP eCLIP20.42■□□□□ 0.86
ARHGEF28-203ENST00000426542 C6orf163Q5TEZ5 329 aa20.42■□□□□ 0.86
ARHGEF28-203ENST00000426542 ZNF804AQ7Z570 1209 aa20.42■□□□□ 0.86
ARHGEF28-203ENST00000426542 PAG1Q9NWQ8 432 aa20.42■□□□□ 0.86
ARHGEF28-203ENST00000426542 PSMA7O14818 248 aa20.42■□□□□ 0.86
ARHGEF28-203ENST00000426542 SKILP12757 684 aa20.42■□□□□ 0.86
ARHGEF28-203ENST00000426542 IL15P40933 162 aaPredicted RBP20.42■□□□□ 0.86
ARHGEF28-203ENST00000426542 DDX12PQ92771 950 aa20.42■□□□□ 0.86
ARHGEF28-203ENST00000426542 CTAGE15A4D2H0 777 aa20.42■□□□□ 0.86
ARHGEF28-203ENST00000426542 TMEM110-MUSTN1A8MSY1 372 aa20.42■□□□□ 0.86
ARHGEF28-203ENST00000426542 CTAGE8P0CG41 777 aa20.42■□□□□ 0.86
ARHGEF28-203ENST00000426542 ATP8B2P98198 1209 aa20.42■□□□□ 0.86
ARHGEF28-203ENST00000426542 TRAF1Q13077 416 aa20.42■□□□□ 0.86
ARHGEF28-203ENST00000426542 CTAGE6Q86UF2 777 aa20.42■□□□□ 0.86
ARHGEF28-203ENST00000426542 CTAGE4Q8IX94 777 aa20.42■□□□□ 0.86
ARHGEF28-203ENST00000426542 GJC1P36383 396 aa20.41■□□□□ 0.86
ARHGEF28-203ENST00000426542 ZFP91Q96JP5 570 aaPredicted RBP20.41■□□□□ 0.86
ARHGEF28-203ENST00000426542 MRPL50Q8N5N7 158 aaKnown RBP20.41■□□□□ 0.86
ARHGEF28-203ENST00000426542 TTC12Q9H892 705 aaPredicted RBP20.41■□□□□ 0.86
ARHGEF28-203ENST00000426542 RASAL2Q9UJF2 1139 aa20.41■□□□□ 0.86
ARHGEF28-203ENST00000426542 DNAJC25Q9H1X3 360 aa20.41■□□□□ 0.86
ARHGEF28-203ENST00000426542 PA2G4Q9UQ80 394 aaKnown RBP20.41■□□□□ 0.86
ARHGEF28-203ENST00000426542 DNAI1Q9UI46 699 aa20.41■□□□□ 0.86
ARHGEF28-203ENST00000426542 KSR2Q6VAB6 950 aa20.41■□□□□ 0.86
ARHGEF28-203ENST00000426542 CADPS2Q86UW7 1296 aa20.41■□□□□ 0.86
ARHGEF28-203ENST00000426542 RALGAPBQ86X10 1494 aa20.4■□□□□ 0.86
ARHGEF28-203ENST00000426542 ALDH1L1O75891 902 aa20.4■□□□□ 0.86
ARHGEF28-203ENST00000426542 ARID5AQ03989 594 aa20.4■□□□□ 0.86
ARHGEF28-203ENST00000426542 DNM1Q05193 864 aaKnown RBP20.4■□□□□ 0.86
ARHGEF28-203ENST00000426542 DACT1Q9NYF0 836 aa20.4■□□□□ 0.86
ARHGEF28-203ENST00000426542 RTL1A6NKG5 1358 aa20.4■□□□□ 0.86
ARHGEF28-203ENST00000426542 F13A1P00488 732 aa20.4■□□□□ 0.86
ARHGEF28-203ENST00000426542 SPAG1Q07617 926 aa20.4■□□□□ 0.86
ARHGEF28-203ENST00000426542 C16orf71Q8IYS4 520 aaPredicted RBP20.4■□□□□ 0.86
ARHGEF28-203ENST00000426542 C6orf50Q9HD87 102 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms