RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 Q6ZUG5 572 aa13.77□□□□□ -0.21
UBR4-207ENST00000425413 CDC37L1Q7L3B6 337 aa13.77□□□□□ -0.21
UBR4-207ENST00000425413 NUTM2BA6NNL0 878 aaPredicted RBP13.77□□□□□ -0.21
UBR4-207ENST00000425413 NUTM2EB1AL46 878 aaPredicted RBP13.77□□□□□ -0.21
UBR4-207ENST00000425413 EXOC5O00471 708 aa13.77□□□□□ -0.21
UBR4-207ENST00000425413 IFIT5Q13325 482 aaKnown RBP13.77□□□□□ -0.21
UBR4-207ENST00000425413 TTC39AQ5SRH9 613 aa13.77□□□□□ -0.21
UBR4-207ENST00000425413 NUTM2AQ8IVF1 878 aaPredicted RBP13.77□□□□□ -0.21
UBR4-207ENST00000425413 BRF1Q92994 677 aa13.77□□□□□ -0.21
UBR4-207ENST00000425413 STOX1Q6ZVD7 989 aa13.76□□□□□ -0.21
UBR4-207ENST00000425413 XAGE2Q96GT9 111 aa13.76□□□□□ -0.21
UBR4-207ENST00000425413 GREM2Q9H772 168 aa13.76□□□□□ -0.21
UBR4-207ENST00000425413 PARP4Q9UKK3 1724 aaKnown RBP13.76□□□□□ -0.21
UBR4-207ENST00000425413 HAND2P61296 217 aa13.76□□□□□ -0.21
UBR4-207ENST00000425413 TRMT112Q9UI30 125 aaKnown RBP13.76□□□□□ -0.21
UBR4-207ENST00000425413 ESPNB1AK53 854 aa13.75□□□□□ -0.21
UBR4-207ENST00000425413 LDHAL6AQ6ZMR3 332 aa13.75□□□□□ -0.21
UBR4-207ENST00000425413 MPNDQ8N594 471 aa13.75□□□□□ -0.21
UBR4-207ENST00000425413 HELBQ8NG08 1087 aaPredicted RBP13.75□□□□□ -0.21
UBR4-207ENST00000425413 HMG20BQ9P0W2 317 aa13.75□□□□□ -0.21
UBR4-207ENST00000425413 TFIP11Q9UBB9 837 aaKnown RBP13.75□□□□□ -0.21
UBR4-207ENST00000425413 TAOK2Q9UL54 1235 aa13.75□□□□□ -0.21
UBR4-207ENST00000425413 U3KPZ7 1027 aaPredicted RBP13.75□□□□□ -0.21
UBR4-207ENST00000425413 METTL24Q5JXM2 366 aa13.75□□□□□ -0.21
UBR4-207ENST00000425413 TNS2Q63HR2 1409 aa13.75□□□□□ -0.21
UBR4-207ENST00000425413 ITGA6P23229 1130 aa13.74□□□□□ -0.21
UBR4-207ENST00000425413 CCDC158Q5M9N0 1113 aa13.74□□□□□ -0.21
UBR4-207ENST00000425413 CNNM1Q9NRU3 951 aa13.74□□□□□ -0.21
UBR4-207ENST00000425413 MAP3K15Q6ZN16 1313 aa13.74□□□□□ -0.21
UBR4-207ENST00000425413 M0R2C6 588 aa13.74□□□□□ -0.21
UBR4-207ENST00000425413 PCCAP05165 728 aaPredicted RBP13.74□□□□□ -0.21
UBR4-207ENST00000425413 CYP19A1P11511 503 aaPredicted RBP13.74□□□□□ -0.21
UBR4-207ENST00000425413 CCDC173Q0VFZ6 552 aa13.74□□□□□ -0.21
UBR4-207ENST00000425413 USPL1Q5W0Q7 1092 aa13.74□□□□□ -0.21
UBR4-207ENST00000425413 GIGYF2Q6Y7W6 1299 aaKnown RBP13.74□□□□□ -0.21
UBR4-207ENST00000425413 NLRP10Q86W26 655 aa13.74□□□□□ -0.21
UBR4-207ENST00000425413 ZBTB38Q8NAP3 1195 aaPredicted RBP13.74□□□□□ -0.21
UBR4-207ENST00000425413 OSBP2Q969R2 916 aa13.74□□□□□ -0.21
UBR4-207ENST00000425413 TCHHQ07283 1943 aa13.74□□□□□ -0.21
UBR4-207ENST00000425413 PLEKHG2Q9H7P9 1386 aa13.74□□□□□ -0.21
UBR4-207ENST00000425413 MAST3O60307 1309 aa13.74□□□□□ -0.21
UBR4-207ENST00000425413 SNAP23O00161 211 aa13.74□□□□□ -0.21
UBR4-207ENST00000425413 ZAP70P43403 619 aa13.74□□□□□ -0.21
UBR4-207ENST00000425413 CCT2P78371 535 aaKnown RBP13.74□□□□□ -0.21
UBR4-207ENST00000425413 ANKRD1Q15327 319 aa13.74□□□□□ -0.21
UBR4-207ENST00000425413 TEX13AQ9BXU3 409 aaPredicted RBP13.74□□□□□ -0.21
UBR4-207ENST00000425413 RNF113AO15541 343 aaKnown RBP13.73□□□□□ -0.21
UBR4-207ENST00000425413 HSPD1P10809 573 aaKnown RBP13.73□□□□□ -0.21
UBR4-207ENST00000425413 APOBRQ0VD83 1088 aa13.73□□□□□ -0.21
UBR4-207ENST00000425413 SYAP1Q96A49 352 aaPredicted RBP13.73□□□□□ -0.21
UBR4-207ENST00000425413 ATP6V1DQ9Y5K8 247 aa13.73□□□□□ -0.21
UBR4-207ENST00000425413 IRS4O14654 1257 aaPredicted RBP13.73□□□□□ -0.21
UBR4-207ENST00000425413 KRT32Q14532 448 aa13.73□□□□□ -0.21
UBR4-207ENST00000425413 ZMYM1Q5SVZ6 1142 aa13.73□□□□□ -0.21
UBR4-207ENST00000425413 DZIP3Q86Y13 1208 aaKnown RBP13.73□□□□□ -0.21
UBR4-207ENST00000425413 TSPY26PQ9H489 355 aa13.73□□□□□ -0.21
UBR4-207ENST00000425413 HCLS1P14317 486 aaPredicted RBP13.72□□□□□ -0.21
UBR4-207ENST00000425413 CLCN1P35523 988 aa13.72□□□□□ -0.21
UBR4-207ENST00000425413 RAB11FIP4Q86YS3 637 aa13.72□□□□□ -0.21
UBR4-207ENST00000425413 NCOA5Q9HCD5 579 aaKnown RBP13.72□□□□□ -0.21
UBR4-207ENST00000425413 GPHNQ9NQX3 736 aaPredicted RBP13.72□□□□□ -0.21
UBR4-207ENST00000425413 CIAO1O76071 339 aa13.72□□□□□ -0.21
UBR4-207ENST00000425413 GIMAP6Q6P9H5 292 aa13.72□□□□□ -0.21
UBR4-207ENST00000425413 TTLL11Q8NHH1 800 aa13.72□□□□□ -0.21
UBR4-207ENST00000425413 GPR108Q9NPR9 543 aa13.72□□□□□ -0.21
UBR4-207ENST00000425413 LAMB4A4D0S4 1761 aa13.72□□□□□ -0.21
UBR4-207ENST00000425413 CEBPZQ03701 1054 aaKnown RBP13.71□□□□□ -0.21
UBR4-207ENST00000425413 ATP2B3Q16720 1220 aa13.71□□□□□ -0.21
UBR4-207ENST00000425413 UBE2HP62256 183 aa13.71□□□□□ -0.21
UBR4-207ENST00000425413 VSIG10Q8N0Z9 540 aa13.71□□□□□ -0.21
UBR4-207ENST00000425413 SH3TC1Q8TE82 1336 aa13.71□□□□□ -0.22
UBR4-207ENST00000425413 TOGARAM1Q9Y4F4 1720 aa13.71□□□□□ -0.22
UBR4-207ENST00000425413 PLCB2Q00722 1185 aa13.71□□□□□ -0.22
UBR4-207ENST00000425413 HELLSQ9NRZ9 838 aa13.71□□□□□ -0.22
UBR4-207ENST00000425413 JCADQ9P266 1359 aa13.7□□□□□ -0.22
UBR4-207ENST00000425413 CTSWP56202 376 aa13.7□□□□□ -0.22
UBR4-207ENST00000425413 KCNQ4P56696 695 aa13.7□□□□□ -0.22
UBR4-207ENST00000425413 PIP4K2BP78356 416 aa13.7□□□□□ -0.22
UBR4-207ENST00000425413 GUCY1B3Q02153 619 aa13.7□□□□□ -0.22
UBR4-207ENST00000425413 TRIM28Q13263 835 aaKnown RBP13.7□□□□□ -0.22
UBR4-207ENST00000425413 TSGA10IPQ3SY00 556 aa13.7□□□□□ -0.22
UBR4-207ENST00000425413 PPP1R9BQ96SB3 815 aa13.7□□□□□ -0.22
UBR4-207ENST00000425413 AKAP2Q9Y2D5 859 aa13.7□□□□□ -0.22
UBR4-207ENST00000425413 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.7□□□□□ -0.22
UBR4-207ENST00000425413 E7EWF7 191 aa13.7□□□□□ -0.22
UBR4-207ENST00000425413 SCRN1Q12765 414 aa13.7□□□□□ -0.22
UBR4-207ENST00000425413 CAMK4Q16566 473 aa13.7□□□□□ -0.22
UBR4-207ENST00000425413 TTC6Q86TZ1 520 aa13.7□□□□□ -0.22
UBR4-207ENST00000425413 GTF3C6Q969F1 213 aa13.7□□□□□ -0.22
UBR4-207ENST00000425413 PUS7LQ9H0K6 701 aaKnown RBP13.7□□□□□ -0.22
UBR4-207ENST00000425413 ANKRD18BA2A2Z9 1011 aa13.69□□□□□ -0.22
UBR4-207ENST00000425413 H3BQV1 296 aa13.69□□□□□ -0.22
UBR4-207ENST00000425413 IDH1O75874 414 aaKnown RBP13.69□□□□□ -0.22
UBR4-207ENST00000425413 CSF1RP07333 972 aa13.69□□□□□ -0.22
UBR4-207ENST00000425413 CCDC183Q5T5S1 534 aa13.69□□□□□ -0.22
UBR4-207ENST00000425413 IFFO2Q5TF58 517 aa13.69□□□□□ -0.22
UBR4-207ENST00000425413 FAM184AQ8NB25 1140 aa13.69□□□□□ -0.22
UBR4-207ENST00000425413 PALLDQ8WX93 1383 aa13.69□□□□□ -0.22
UBR4-207ENST00000425413 BCL9O00512 1426 aa13.69□□□□□ -0.22
UBR4-207ENST00000425413 PDCP20941 246 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms