RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 TMC1Q8TDI8 760 aa6.96□□□□□ -1.3
HDAC9-209ENST00000425071 LILRB5O75023 590 aa6.95□□□□□ -1.3
HDAC9-209ENST00000425071 PHACTR2O75167 634 aa6.95□□□□□ -1.3
HDAC9-209ENST00000425071 MAPK1P28482 360 aa6.95□□□□□ -1.3
HDAC9-209ENST00000425071 DGKGP49619 791 aa6.95□□□□□ -1.3
HDAC9-209ENST00000425071 ELMSAN1Q6PJG2 1045 aa6.95□□□□□ -1.3
HDAC9-209ENST00000425071 C20orf204Q6ZNR8 217 aa6.95□□□□□ -1.3
HDAC9-209ENST00000425071 MICALL1Q8N3F8 863 aa6.95□□□□□ -1.3
HDAC9-209ENST00000425071 DNAJC25Q9H1X3 360 aa6.95□□□□□ -1.3
HDAC9-209ENST00000425071 RRAGCQ9HB90 399 aa6.95□□□□□ -1.3
HDAC9-209ENST00000425071 GNB5O14775 395 aa6.94□□□□□ -1.3
HDAC9-209ENST00000425071 RGS9O75916 674 aaPredicted RBP6.94□□□□□ -1.3
HDAC9-209ENST00000425071 PSAPL1Q6NUJ1 521 aa6.94□□□□□ -1.3
HDAC9-209ENST00000425071 ALYREFQ86V81 257 aaKnown RBP6.94□□□□□ -1.3
HDAC9-209ENST00000425071 C1orf127Q8N9H9 656 aa6.94□□□□□ -1.3
HDAC9-209ENST00000425071 ASB16Q96NS5 453 aa6.94□□□□□ -1.3
HDAC9-209ENST00000425071 CNTN3Q9P232 1028 aa6.94□□□□□ -1.3
HDAC9-209ENST00000425071 SALL4Q9UJQ4 1053 aa6.94□□□□□ -1.3
HDAC9-209ENST00000425071 STARD13Q9Y3M8 1113 aa6.94□□□□□ -1.3
HDAC9-209ENST00000425071 A6NHS1 94 aa6.93□□□□□ -1.3
HDAC9-209ENST00000425071 SPDYE3A6NKU9 549 aa6.93□□□□□ -1.3
HDAC9-209ENST00000425071 M0R082 166 aa6.93□□□□□ -1.3
HDAC9-209ENST00000425071 EDN3P14138 238 aa6.93□□□□□ -1.3
HDAC9-209ENST00000425071 CPB1P15086 417 aa6.93□□□□□ -1.3
HDAC9-209ENST00000425071 HOXB4P17483 251 aaPredicted RBP6.93□□□□□ -1.3
HDAC9-209ENST00000425071 EIF2AK2P19525 551 aaKnown RBP6.93□□□□□ -1.3
HDAC9-209ENST00000425071 LINC00114Q6XXX2 140 aa6.93□□□□□ -1.3
HDAC9-209ENST00000425071 NCAPG2Q86XI2 1143 aa6.93□□□□□ -1.3
HDAC9-209ENST00000425071 ZNF417Q8TAU3 575 aa6.93□□□□□ -1.3
HDAC9-209ENST00000425071 ZNF587Q96SQ5 575 aaPredicted RBP6.93□□□□□ -1.3
HDAC9-209ENST00000425071 ZFYVE28Q9HCC9 887 aa6.93□□□□□ -1.3
HDAC9-209ENST00000425071 NOP53Q9NZM5 478 aaKnown RBP6.93□□□□□ -1.3
HDAC9-209ENST00000425071 AMOTL2Q9Y2J4 779 aa6.93□□□□□ -1.3
HDAC9-209ENST00000425071 CPNE3O75131 537 aaKnown RBP6.92□□□□□ -1.3
HDAC9-209ENST00000425071 IGHA2P01877 340 aa6.92□□□□□ -1.3
HDAC9-209ENST00000425071 ALBP02768 609 aa6.92□□□□□ -1.3
HDAC9-209ENST00000425071 ERCC3P19447 782 aa6.92□□□□□ -1.3
HDAC9-209ENST00000425071 PLCB3Q01970 1234 aa6.92□□□□□ -1.3
HDAC9-209ENST00000425071 PERM1Q5SV97 790 aa6.92□□□□□ -1.3
HDAC9-209ENST00000425071 TMC7Q7Z402 723 aa6.92□□□□□ -1.3
HDAC9-209ENST00000425071 CEP120Q8N960 986 aa6.92□□□□□ -1.3
HDAC9-209ENST00000425071 PLD4Q96BZ4 506 aa6.92□□□□□ -1.3
HDAC9-209ENST00000425071 NSUN5Q96P11 429 aaKnown RBP6.92□□□□□ -1.3
HDAC9-209ENST00000425071 LPIN3Q9BQK8 851 aa6.92□□□□□ -1.3
HDAC9-209ENST00000425071 GZF1Q9H116 711 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-209ENST00000425071 CHRDQ9H2X0 955 aa6.92□□□□□ -1.3
HDAC9-209ENST00000425071 JPH1Q9HDC5 661 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-209ENST00000425071 GPR182O15218 404 aa6.91□□□□□ -1.3
HDAC9-209ENST00000425071 TREHO43280 583 aa6.91□□□□□ -1.3
HDAC9-209ENST00000425071 SMNDC1O75940 238 aaKnown RBP eCLIP6.91□□□□□ -1.3
HDAC9-209ENST00000425071 MLLT1Q03111 559 aaPredicted RBP6.91□□□□□ -1.3
HDAC9-209ENST00000425071 COL19A1Q14993 1142 aa6.91□□□□□ -1.3
HDAC9-209ENST00000425071 NIF3L1Q9GZT8 377 aa6.91□□□□□ -1.3
HDAC9-209ENST00000425071 FOXD3Q9UJU5 478 aaPredicted RBP6.91□□□□□ -1.3
HDAC9-209ENST00000425071 NAGPAQ9UK23 515 aa6.91□□□□□ -1.3
HDAC9-209ENST00000425071 J3QW42 95 aa6.9□□□□□ -1.3
HDAC9-209ENST00000425071 CYP2E1P05181 493 aaPredicted RBP6.9□□□□□ -1.3
HDAC9-209ENST00000425071 SNRPNP63162 240 aaKnown RBP6.9□□□□□ -1.3
HDAC9-209ENST00000425071 FGD1P98174 961 aa6.9□□□□□ -1.3
HDAC9-209ENST00000425071 DSC3Q14574 896 aa6.9□□□□□ -1.3
HDAC9-209ENST00000425071 HFE2Q6ZVN8 426 aa6.9□□□□□ -1.3
HDAC9-209ENST00000425071 SMG9Q9H0W8 520 aaKnown RBP6.9□□□□□ -1.3
HDAC9-209ENST00000425071 MUC3BQ9H195 1237 aa6.9□□□□□ -1.3
HDAC9-209ENST00000425071 EREGO14944 169 aa6.89□□□□□ -1.31
HDAC9-209ENST00000425071 AFF1P51825 1210 aaKnown RBP6.89□□□□□ -1.31
HDAC9-209ENST00000425071 KCNMA1Q12791 1236 aa6.89□□□□□ -1.31
HDAC9-209ENST00000425071 CCDC27Q2M243 656 aa6.89□□□□□ -1.31
HDAC9-209ENST00000425071 COL13A1Q5TAT6 717 aaPredicted RBP6.89□□□□□ -1.31
HDAC9-209ENST00000425071 GALNT12Q8IXK2 581 aa6.89□□□□□ -1.31
HDAC9-209ENST00000425071 NUDT8Q8WV74 236 aa6.89□□□□□ -1.31
HDAC9-209ENST00000425071 CSRNP1Q96S65 589 aa6.89□□□□□ -1.31
HDAC9-209ENST00000425071 PBX4Q9BYU1 374 aa6.89□□□□□ -1.31
HDAC9-209ENST00000425071 CNTNAP5Q8WYK1 1306 aa6.89□□□□□ -1.31
HDAC9-209ENST00000425071 FAM177BA6PVY3 158 aa6.88□□□□□ -1.31
HDAC9-209ENST00000425071 EIF1AYO14602 144 aaKnown RBP6.88□□□□□ -1.31
HDAC9-209ENST00000425071 NID1P14543 1247 aa6.88□□□□□ -1.31
HDAC9-209ENST00000425071 COL9A3Q14050 684 aaPredicted RBP6.88□□□□□ -1.31
HDAC9-209ENST00000425071 DTWD1Q8N5C7 304 aa6.88□□□□□ -1.31
HDAC9-209ENST00000425071 DCAF11Q8TEB1 546 aa6.88□□□□□ -1.31
HDAC9-209ENST00000425071 KANSL3Q9P2N6 904 aa6.88□□□□□ -1.31
HDAC9-209ENST00000425071 GRIK5Q16478 980 aa6.87□□□□□ -1.31
HDAC9-209ENST00000425071 MSL1Q68DK7 614 aa6.87□□□□□ -1.31
HDAC9-209ENST00000425071 TMEM102Q8N9M5 508 aaPredicted RBP6.87□□□□□ -1.31
HDAC9-209ENST00000425071 FBF1Q8TES7 1133 aa6.87□□□□□ -1.31
HDAC9-209ENST00000425071 SRA1Q9HD15 236 aaKnown RBP6.87□□□□□ -1.31
HDAC9-209ENST00000425071 DZANK1Q9NVP4 752 aa6.87□□□□□ -1.31
HDAC9-209ENST00000425071 PTPRAP18433 802 aa6.86□□□□□ -1.31
HDAC9-209ENST00000425071 FMR1Q06787 632 aaKnown RBP eCLIP6.86□□□□□ -1.31
HDAC9-209ENST00000425071 ORC1Q13415 861 aa6.86□□□□□ -1.31
HDAC9-209ENST00000425071 PRRT3Q5FWE3 981 aa6.86□□□□□ -1.31
HDAC9-209ENST00000425071 KIAA0319Q5VV43 1072 aa6.86□□□□□ -1.31
HDAC9-209ENST00000425071 CEP135Q66GS9 1140 aa6.86□□□□□ -1.31
HDAC9-209ENST00000425071 ILDR2Q71H61 639 aa6.86□□□□□ -1.31
HDAC9-209ENST00000425071 WFDC8Q8IUA0 241 aa6.86□□□□□ -1.31
HDAC9-209ENST00000425071 MAP4K3Q8IVH8 894 aa6.86□□□□□ -1.31
HDAC9-209ENST00000425071 TRIM11Q96F44 468 aa6.86□□□□□ -1.31
HDAC9-209ENST00000425071 OSMRQ99650 979 aa6.86□□□□□ -1.31
HDAC9-209ENST00000425071 PLVAPQ9BX97 442 aa6.86□□□□□ -1.31
HDAC9-209ENST00000425071 RASSF4Q9H2L5 321 aa6.86□□□□□ -1.31
HDAC9-209ENST00000425071 PDE2AO00408 941 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms