RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 GOLIM4O00461 696 aa15.86■□□□□ 0.13
SREBF2-202ENST00000424354 ANO6Q4KMQ2 910 aa15.86■□□□□ 0.13
SREBF2-202ENST00000424354 CTAGE1Q96RT6 745 aa15.86■□□□□ 0.13
SREBF2-202ENST00000424354 PIK3C2BO00750 1634 aa15.86■□□□□ 0.13
SREBF2-202ENST00000424354 IBSPP21815 317 aaPredicted RBP15.86■□□□□ 0.13
SREBF2-202ENST00000424354 USP5P45974 858 aa15.86■□□□□ 0.13
SREBF2-202ENST00000424354 CTAGE15A4D2H0 777 aa15.85■□□□□ 0.13
SREBF2-202ENST00000424354 CTAGE8P0CG41 777 aa15.85■□□□□ 0.13
SREBF2-202ENST00000424354 CTAGE6Q86UF2 777 aa15.85■□□□□ 0.13
SREBF2-202ENST00000424354 CTAGE4Q8IX94 777 aa15.85■□□□□ 0.13
SREBF2-202ENST00000424354 A0A087WZG4 1122 aa15.85■□□□□ 0.13
SREBF2-202ENST00000424354 CCDC194A0A1B0GVG4 234 aa15.85■□□□□ 0.13
SREBF2-202ENST00000424354 RBM25P49756 843 aaKnown RBP15.85■□□□□ 0.13
SREBF2-202ENST00000424354 BICDL1Q6ZP65 573 aa15.85■□□□□ 0.13
SREBF2-202ENST00000424354 USP48Q86UV5 1035 aa15.85■□□□□ 0.13
SREBF2-202ENST00000424354 USP16Q9Y5T5 823 aa15.85■□□□□ 0.13
SREBF2-202ENST00000424354 IARSP41252 1262 aaKnown RBP15.85■□□□□ 0.13
SREBF2-202ENST00000424354 UBASH3AP57075 661 aa15.85■□□□□ 0.13
SREBF2-202ENST00000424354 FLIIQ13045 1269 aa15.85■□□□□ 0.13
SREBF2-202ENST00000424354 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.85■□□□□ 0.13
SREBF2-202ENST00000424354 CLTCL1P53675 1640 aa15.85■□□□□ 0.13
SREBF2-202ENST00000424354 RAB3GAP1Q15042 981 aa15.85■□□□□ 0.13
SREBF2-202ENST00000424354 SMC5Q8IY18 1101 aa15.85■□□□□ 0.13
SREBF2-202ENST00000424354 JADE2Q9NQC1 790 aa15.85■□□□□ 0.13
SREBF2-202ENST00000424354 HYPKQ9NX55 129 aa15.85■□□□□ 0.13
SREBF2-202ENST00000424354 IFIT3O14879 490 aaKnown RBP15.85■□□□□ 0.13
SREBF2-202ENST00000424354 STAMBPO95630 424 aa15.85■□□□□ 0.13
SREBF2-202ENST00000424354 ORC3Q9UBD5 711 aaPredicted RBP15.85■□□□□ 0.13
SREBF2-202ENST00000424354 IFI16Q16666 785 aaKnown RBP15.84■□□□□ 0.13
SREBF2-202ENST00000424354 AMOTQ4VCS5 1084 aa15.84■□□□□ 0.13
SREBF2-202ENST00000424354 ZNF830Q96NB3 372 aaPredicted RBP15.84■□□□□ 0.13
SREBF2-202ENST00000424354 MYD88Q99836 296 aa15.84■□□□□ 0.13
SREBF2-202ENST00000424354 DCCP43146 1447 aa15.84■□□□□ 0.13
SREBF2-202ENST00000424354 GTF2A1P52655 376 aaPredicted RBP15.84■□□□□ 0.13
SREBF2-202ENST00000424354 KCNG4Q8TDN1 519 aa15.84■□□□□ 0.13
SREBF2-202ENST00000424354 IPO4Q8TEX9 1081 aaKnown RBP15.84■□□□□ 0.13
SREBF2-202ENST00000424354 DBF4Q9UBU7 674 aaPredicted RBP15.84■□□□□ 0.13
SREBF2-202ENST00000424354 MINDY4BA8MYZ0 360 aa15.84■□□□□ 0.13
SREBF2-202ENST00000424354 LARP6Q9BRS8 491 aaKnown RBP15.84■□□□□ 0.13
SREBF2-202ENST00000424354 RMND1Q9NWS8 449 aa15.84■□□□□ 0.13
SREBF2-202ENST00000424354 ABCF2Q9UG63 623 aa15.84■□□□□ 0.13
SREBF2-202ENST00000424354 DNAI1Q9UI46 699 aa15.84■□□□□ 0.13
SREBF2-202ENST00000424354 HSPA4P34932 840 aa15.83■□□□□ 0.13
SREBF2-202ENST00000424354 DNA2P51530 1060 aa15.83■□□□□ 0.13
SREBF2-202ENST00000424354 NLRP5P59047 1200 aa15.83■□□□□ 0.13
SREBF2-202ENST00000424354 TNIP1Q15025 636 aa15.83■□□□□ 0.13
SREBF2-202ENST00000424354 SPINK5Q9NQ38 1064 aaPredicted RBP15.83■□□□□ 0.13
SREBF2-202ENST00000424354 CNPY2Q9Y2B0 182 aa15.83■□□□□ 0.13
SREBF2-202ENST00000424354 C3P01024 1663 aa15.83■□□□□ 0.13
SREBF2-202ENST00000424354 KDM5AP29375 1690 aaKnown RBP15.83■□□□□ 0.13
SREBF2-202ENST00000424354 HOOK3Q86VS8 718 aa15.83■□□□□ 0.13
SREBF2-202ENST00000424354 SDSP20132 328 aa15.83■□□□□ 0.12
SREBF2-202ENST00000424354 FBLN1P23142 703 aa15.83■□□□□ 0.12
SREBF2-202ENST00000424354 CATIPQ7Z7H3 387 aa15.83■□□□□ 0.12
SREBF2-202ENST00000424354 BBXQ8WY36 941 aaPredicted RBP15.83■□□□□ 0.12
SREBF2-202ENST00000424354 ADAMTS2O95450 1211 aa15.83■□□□□ 0.12
SREBF2-202ENST00000424354 STARD3NLO95772 234 aa15.83■□□□□ 0.12
SREBF2-202ENST00000424354 SYKP43405 635 aa15.83■□□□□ 0.12
SREBF2-202ENST00000424354 FEZ1Q99689 392 aa15.83■□□□□ 0.12
SREBF2-202ENST00000424354 ADGRL3Q9HAR2 1447 aa15.82■□□□□ 0.12
SREBF2-202ENST00000424354 OPA1O60313 960 aa15.82■□□□□ 0.12
SREBF2-202ENST00000424354 NF2P35240 595 aa15.82■□□□□ 0.12
SREBF2-202ENST00000424354 SPAG1Q07617 926 aa15.82■□□□□ 0.12
SREBF2-202ENST00000424354 DLC1Q96QB1 1528 aa15.82■□□□□ 0.12
SREBF2-202ENST00000424354 TMCO5BA8MYB1 307 aa15.82■□□□□ 0.12
SREBF2-202ENST00000424354 MATR3P43243 847 aaKnown RBP eCLIP15.82■□□□□ 0.125e-7■■■□□ 16.9
SREBF2-202ENST00000424354 ZNF772Q68DY9 489 aaPredicted RBP15.82■□□□□ 0.12
SREBF2-202ENST00000424354 CALML4Q96GE6 196 aa15.82■□□□□ 0.12
SREBF2-202ENST00000424354 TCP11L1Q9NUJ3 509 aa15.82■□□□□ 0.12
SREBF2-202ENST00000424354 N4BP3O15049 544 aa15.82■□□□□ 0.12
SREBF2-202ENST00000424354 F13A1P00488 732 aa15.82■□□□□ 0.12
SREBF2-202ENST00000424354 CYLC1P35663 651 aaPredicted RBP15.82■□□□□ 0.12
SREBF2-202ENST00000424354 MKNK2Q9HBH9 465 aa15.82■□□□□ 0.12
SREBF2-202ENST00000424354 CAVIN4Q5BKX8 364 aa15.82■□□□□ 0.12
SREBF2-202ENST00000424354 MRPS27Q92552 414 aaKnown RBP15.82■□□□□ 0.12
SREBF2-202ENST00000424354 GOLGA1Q92805 767 aa15.82■□□□□ 0.12
SREBF2-202ENST00000424354 ZSWIM4Q9H7M6 989 aa15.82■□□□□ 0.12
SREBF2-202ENST00000424354 PPIP5K1Q6PFW1 1433 aa15.82■□□□□ 0.12
SREBF2-202ENST00000424354 PRIM1P49642 420 aaKnown RBP15.81■□□□□ 0.12
SREBF2-202ENST00000424354 BMP15O95972 392 aa15.81■□□□□ 0.12
SREBF2-202ENST00000424354 TTF1Q15361 905 aaPredicted RBP15.81■□□□□ 0.12
SREBF2-202ENST00000424354 LRRC27Q9C0I9 530 aa15.81■□□□□ 0.12
SREBF2-202ENST00000424354 CETN1Q12798 172 aa15.81■□□□□ 0.12
SREBF2-202ENST00000424354 CCDC40Q4G0X9 1142 aa15.81■□□□□ 0.12
SREBF2-202ENST00000424354 NCOA7Q8NI08 942 aa15.81■□□□□ 0.12
SREBF2-202ENST00000424354 DDX12PQ92771 950 aa15.81■□□□□ 0.12
SREBF2-202ENST00000424354 SETBP1Q9Y6X0 1596 aa15.81■□□□□ 0.12
SREBF2-202ENST00000424354 NEBLO76041 1014 aa15.81■□□□□ 0.12
SREBF2-202ENST00000424354 LIG1P18858 919 aa15.81■□□□□ 0.12
SREBF2-202ENST00000424354 IFIT5Q13325 482 aaKnown RBP15.81■□□□□ 0.12
SREBF2-202ENST00000424354 ESYT1Q9BSJ8 1104 aa15.81■□□□□ 0.12
SREBF2-202ENST00000424354 OGFRQ9NZT2 677 aa15.81■□□□□ 0.12
SREBF2-202ENST00000424354 SBNO2Q9Y2G9 1366 aa15.81■□□□□ 0.12
SREBF2-202ENST00000424354 TRIM21P19474 475 aaKnown RBP15.81■□□□□ 0.12
SREBF2-202ENST00000424354 NSRP1Q9H0G5 558 aaKnown RBP15.81■□□□□ 0.12
SREBF2-202ENST00000424354 POLR3DP05423 398 aaPredicted RBP15.8■□□□□ 0.12
SREBF2-202ENST00000424354 METAP2P50579 478 aaKnown RBP eCLIP15.8■□□□□ 0.121e-6■■■□□ 14.6
SREBF2-202ENST00000424354 UBE4AQ14139 1066 aa15.8■□□□□ 0.12
SREBF2-202ENST00000424354 C6orf163Q5TEZ5 329 aa15.8■□□□□ 0.12
SREBF2-202ENST00000424354 DNAI2Q9GZS0 605 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms