RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 OCLNQ16625 522 aa4.72□□□□□ -1.65
PMS1-209ENST00000424059 FOXD4L6Q3SYB3 417 aaPredicted RBP4.72□□□□□ -1.65
PMS1-209ENST00000424059 SHISA2Q6UWI4 295 aa4.72□□□□□ -1.65
PMS1-209ENST00000424059 FOXD4L3Q6VB84 417 aaPredicted RBP4.72□□□□□ -1.65
PMS1-209ENST00000424059 NLRP13Q86W25 1043 aa4.72□□□□□ -1.65
PMS1-209ENST00000424059 PLD4Q96BZ4 506 aa4.72□□□□□ -1.65
PMS1-209ENST00000424059 MRPL18Q9H0U6 180 aaKnown RBP4.72□□□□□ -1.65
PMS1-209ENST00000424059 KCNMB2Q9Y691 235 aa4.72□□□□□ -1.65
PMS1-209ENST00000424059 CMTR1Q8N1G2 835 aaKnown RBP4.71□□□□□ -1.66
PMS1-209ENST00000424059 PIK3R5Q8WYR1 880 aa4.71□□□□□ -1.66
PMS1-209ENST00000424059 NOS3P29474 1203 aa4.7□□□□□ -1.66
PMS1-209ENST00000424059 MLLT1Q03111 559 aaPredicted RBP4.7□□□□□ -1.66
PMS1-209ENST00000424059 RGL4Q8IZJ4 473 aa4.7□□□□□ -1.66
PMS1-209ENST00000424059 TMEM130Q8N3G9 435 aa4.7□□□□□ -1.66
PMS1-209ENST00000424059 ABTB2Q8N961 1025 aa4.7□□□□□ -1.66
PMS1-209ENST00000424059 CXXC1Q9P0U4 656 aaPredicted RBP4.7□□□□□ -1.66
PMS1-209ENST00000424059 ZNF777Q9ULD5 760 aaPredicted RBP4.7□□□□□ -1.66
PMS1-209ENST00000424059 FNDC3AQ9Y2H6 1198 aaKnown RBP4.7□□□□□ -1.66
PMS1-209ENST00000424059 MMP20O60882 483 aa4.7□□□□□ -1.66
PMS1-209ENST00000424059 Q6ZS46 218 aa4.7□□□□□ -1.66
PMS1-209ENST00000424059 CLP1Q92989 425 aaKnown RBP4.7□□□□□ -1.66
PMS1-209ENST00000424059 ZMIZ1Q9ULJ6 1067 aa4.7□□□□□ -1.66
PMS1-209ENST00000424059 DEAF1O75398 565 aaPredicted RBP4.69□□□□□ -1.66
PMS1-209ENST00000424059 RANGAP1P46060 587 aaPredicted RBP4.69□□□□□ -1.66
PMS1-209ENST00000424059 FAM69CQ0P6D2 419 aa4.69□□□□□ -1.66
PMS1-209ENST00000424059 HYAL2Q12891 473 aa4.69□□□□□ -1.66
PMS1-209ENST00000424059 PRIMPOLQ96LW4 560 aa4.69□□□□□ -1.66
PMS1-209ENST00000424059 PRMT3O60678 531 aa4.68□□□□□ -1.66
PMS1-209ENST00000424059 COBLO75128 1261 aa4.68□□□□□ -1.66
PMS1-209ENST00000424059 IREB2P48200 963 aaKnown RBP4.68□□□□□ -1.66
PMS1-209ENST00000424059 NBPF11Q86T75 865 aa4.68□□□□□ -1.66
PMS1-209ENST00000424059 ETFBKMTQ8IXQ9 262 aa4.68□□□□□ -1.66
PMS1-209ENST00000424059 OR13H1Q8NG92 308 aa4.68□□□□□ -1.66
PMS1-209ENST00000424059 AKTIPQ9H8T0 292 aa4.68□□□□□ -1.66
PMS1-209ENST00000424059 RNF112Q9ULX5 631 aa4.68□□□□□ -1.66
PMS1-209ENST00000424059 UBAP1LF5GYI3 381 aa4.68□□□□□ -1.66
PMS1-209ENST00000424059 TNFRSF10BO14763 440 aa4.68□□□□□ -1.66
PMS1-209ENST00000424059 RPLP1P05386 114 aaKnown RBP4.68□□□□□ -1.66
PMS1-209ENST00000424059 SRPK2P78362 688 aaKnown RBP4.68□□□□□ -1.66
PMS1-209ENST00000424059 CDCA8Q53HL2 280 aa4.68□□□□□ -1.66
PMS1-209ENST00000424059 DZIP1LQ8IYY4 767 aaKnown RBP4.68□□□□□ -1.66
PMS1-209ENST00000424059 IL22RA1Q8N6P7 574 aa4.68□□□□□ -1.66
PMS1-209ENST00000424059 F8W735 103 aaPredicted RBP4.67□□□□□ -1.66
PMS1-209ENST00000424059 GSC2O15499 205 aa4.67□□□□□ -1.66
PMS1-209ENST00000424059 PRR23CQ6ZRP0 262 aa4.67□□□□□ -1.66
PMS1-209ENST00000424059 HFE2Q6ZVN8 426 aa4.67□□□□□ -1.66
PMS1-209ENST00000424059 MEGF10Q96KG7 1140 aa4.67□□□□□ -1.66
PMS1-209ENST00000424059 TRIP4Q15650 581 aaPredicted RBP4.67□□□□□ -1.66
PMS1-209ENST00000424059 STK32AQ8WU08 396 aa4.67□□□□□ -1.66
PMS1-209ENST00000424059 PBXIP1Q96AQ6 731 aa4.67□□□□□ -1.66
PMS1-209ENST00000424059 SPACA7Q96KW9 195 aa4.67□□□□□ -1.66
PMS1-209ENST00000424059 NSUN5Q96P11 429 aaKnown RBP4.67□□□□□ -1.66
PMS1-209ENST00000424059 SAP130Q9H0E3 1048 aa4.67□□□□□ -1.66
PMS1-209ENST00000424059 STIM2Q9P246 746 aa4.67□□□□□ -1.66
PMS1-209ENST00000424059 USP20Q9Y2K6 914 aa4.67□□□□□ -1.66
PMS1-209ENST00000424059 J3QW42 95 aa4.66□□□□□ -1.66
PMS1-209ENST00000424059 SMNDC1O75940 238 aaKnown RBP eCLIP4.66□□□□□ -1.66
PMS1-209ENST00000424059 KIF4AO95239 1232 aa4.66□□□□□ -1.66
PMS1-209ENST00000424059 ZAP70P43403 619 aa4.66□□□□□ -1.66
PMS1-209ENST00000424059 TTC39BQ5VTQ0 682 aaPredicted RBP4.66□□□□□ -1.66
PMS1-209ENST00000424059 PPME1Q9Y570 386 aa4.66□□□□□ -1.66
PMS1-209ENST00000424059 SETDB1Q15047 1291 aa4.65□□□□□ -1.66
PMS1-209ENST00000424059 GDF6Q6KF10 455 aaPredicted RBP4.65□□□□□ -1.66
PMS1-209ENST00000424059 PDE12Q6L8Q7 609 aaKnown RBP4.65□□□□□ -1.66
PMS1-209ENST00000424059 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.65□□□□□ -1.66
PMS1-209ENST00000424059 WNT8BQ93098 351 aa4.65□□□□□ -1.66
PMS1-209ENST00000424059 HYAL3O43820 417 aaPredicted RBP4.65□□□□□ -1.67
PMS1-209ENST00000424059 FSTP19883 344 aa4.65□□□□□ -1.67
PMS1-209ENST00000424059 CDC27P30260 824 aa4.65□□□□□ -1.67
PMS1-209ENST00000424059 UVSSAQ2YD98 709 aa4.65□□□□□ -1.67
PMS1-209ENST00000424059 TMEM164Q5U3C3 297 aa4.65□□□□□ -1.67
PMS1-209ENST00000424059 HOMEZQ8IX15 550 aa4.65□□□□□ -1.67
PMS1-209ENST00000424059 CEP41Q9BYV8 373 aa4.65□□□□□ -1.67
PMS1-209ENST00000424059 BCL11AQ9H165 835 aa4.65□□□□□ -1.67
PMS1-209ENST00000424059 ABI2Q9NYB9 513 aaPredicted RBP4.65□□□□□ -1.67
PMS1-209ENST00000424059 SERPINA10Q9UK55 444 aa4.65□□□□□ -1.67
PMS1-209ENST00000424059 TRIM33Q9UPN9 1127 aa4.65□□□□□ -1.67
PMS1-209ENST00000424059 FAM177BA6PVY3 158 aa4.64□□□□□ -1.67
PMS1-209ENST00000424059 FAM117BQ6P1L5 589 aa4.64□□□□□ -1.67
PMS1-209ENST00000424059 KLHL23Q8NBE8 558 aa4.64□□□□□ -1.67
PMS1-209ENST00000424059 CCDC97Q96F63 343 aaPredicted RBP4.64□□□□□ -1.67
PMS1-209ENST00000424059 PCSK2P16519 638 aa4.63□□□□□ -1.67
PMS1-209ENST00000424059 PTPRAP18433 802 aa4.63□□□□□ -1.67
PMS1-209ENST00000424059 RAXQ9Y2V3 346 aa4.63□□□□□ -1.67
PMS1-209ENST00000424059 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.63□□□□□ -1.67
PMS1-209ENST00000424059 SCNN1AP37088 669 aa4.63□□□□□ -1.67
PMS1-209ENST00000424059 XKR5Q6UX68 686 aa4.63□□□□□ -1.67
PMS1-209ENST00000424059 MKNK1Q9BUB5 465 aa4.63□□□□□ -1.67
PMS1-209ENST00000424059 PBX4Q9BYU1 374 aa4.63□□□□□ -1.67
PMS1-209ENST00000424059 ADAM19Q9H013 955 aa4.63□□□□□ -1.67
PMS1-209ENST00000424059 ATP2B4P23634 1241 aa4.62□□□□□ -1.67
PMS1-209ENST00000424059 CD68P34810 354 aaPredicted RBP4.62□□□□□ -1.67
PMS1-209ENST00000424059 CEP135Q66GS9 1140 aa4.62□□□□□ -1.67
PMS1-209ENST00000424059 GPR152Q8TDT2 470 aa4.62□□□□□ -1.67
PMS1-209ENST00000424059 PMEPA1Q969W9 287 aa4.62□□□□□ -1.67
PMS1-209ENST00000424059 DHX15O43143 795 aaKnown RBP4.62□□□□□ -1.67
PMS1-209ENST00000424059 FAM26DQ5JW98 314 aa4.62□□□□□ -1.67
PMS1-209ENST00000424059 COL13A1Q5TAT6 717 aaPredicted RBP4.62□□□□□ -1.67
PMS1-209ENST00000424059 HELQQ8TDG4 1101 aa4.62□□□□□ -1.67
PMS1-209ENST00000424059 ZMYND15Q9H091 742 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms