RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 HDAC9Q9UKV0 1011 aa10.95□□□□□ -0.66
CLCN3P1-201ENST00000423965 COL11A2P13942 1736 aaPredicted RBP10.95□□□□□ -0.66
CLCN3P1-201ENST00000423965 C1orf141Q5JVX7 400 aa10.94□□□□□ -0.66
CLCN3P1-201ENST00000423965 CC2D2BQ6DHV5 1058 aa10.94□□□□□ -0.66
CLCN3P1-201ENST00000423965 SMYD5Q6GMV2 418 aa10.94□□□□□ -0.66
CLCN3P1-201ENST00000423965 CSRNP1Q96S65 589 aa10.94□□□□□ -0.66
CLCN3P1-201ENST00000423965 GPRC5DQ9NZD1 345 aa10.94□□□□□ -0.66
CLCN3P1-201ENST00000423965 ARFGEF2Q9Y6D5 1785 aa10.94□□□□□ -0.66
CLCN3P1-201ENST00000423965 CEP290O15078 2479 aa10.93□□□□□ -0.66
CLCN3P1-201ENST00000423965 TESPA1A2RU30 521 aaPredicted RBP10.93□□□□□ -0.66
CLCN3P1-201ENST00000423965 GOLGA8CPA6NN73 597 aa10.93□□□□□ -0.66
CLCN3P1-201ENST00000423965 CANXP27824 592 aaKnown RBP10.93□□□□□ -0.66
CLCN3P1-201ENST00000423965 ALDH1B1P30837 517 aa10.93□□□□□ -0.66
CLCN3P1-201ENST00000423965 GRIPAP1Q4V328 841 aa10.93□□□□□ -0.66
CLCN3P1-201ENST00000423965 INTS3Q68E01 1043 aaKnown RBP10.93□□□□□ -0.66
CLCN3P1-201ENST00000423965 MRPL50Q8N5N7 158 aaKnown RBP10.93□□□□□ -0.66
CLCN3P1-201ENST00000423965 CARD11Q9BXL7 1154 aa10.93□□□□□ -0.66
CLCN3P1-201ENST00000423965 NBPF3Q9H094 633 aa10.93□□□□□ -0.66
CLCN3P1-201ENST00000423965 KIAA1468Q9P260 1216 aa10.93□□□□□ -0.66
CLCN3P1-201ENST00000423965 RABGEF1Q9UJ41 708 aa10.93□□□□□ -0.66
CLCN3P1-201ENST00000423965 AKAP11Q9UKA4 1901 aa10.92□□□□□ -0.66
CLCN3P1-201ENST00000423965 TRIM6-TRIM34B2RNG4 842 aa10.92□□□□□ -0.66
CLCN3P1-201ENST00000423965 STARD3NLO95772 234 aa10.92□□□□□ -0.66
CLCN3P1-201ENST00000423965 NOM1Q5C9Z4 860 aaKnown RBP10.92□□□□□ -0.66
CLCN3P1-201ENST00000423965 CACNA1SQ13698 1873 aa10.91□□□□□ -0.66
CLCN3P1-201ENST00000423965 COL6A3P12111 3177 aa10.91□□□□□ -0.66
CLCN3P1-201ENST00000423965 BHMG1C9JSJ3 638 aaPredicted RBP10.91□□□□□ -0.66
CLCN3P1-201ENST00000423965 ZNF157P51786 506 aaPredicted RBP10.91□□□□□ -0.66
CLCN3P1-201ENST00000423965 OLFM4Q6UX06 510 aa10.91□□□□□ -0.66
CLCN3P1-201ENST00000423965 C2orf69Q8N8R5 385 aa10.91□□□□□ -0.66
CLCN3P1-201ENST00000423965 EIF4A2Q14240 407 aaKnown RBP10.9□□□□□ -0.66
CLCN3P1-201ENST00000423965 LARGE2Q8N3Y3 721 aa10.9□□□□□ -0.66
CLCN3P1-201ENST00000423965 ZNF296Q8WUU4 475 aaPredicted RBP10.9□□□□□ -0.66
CLCN3P1-201ENST00000423965 CDCA7LQ96GN5 454 aa10.9□□□□□ -0.66
CLCN3P1-201ENST00000423965 KIAA0100Q14667 2235 aaKnown RBP10.9□□□□□ -0.66
CLCN3P1-201ENST00000423965 PRSS12P56730 875 aa10.89□□□□□ -0.67
CLCN3P1-201ENST00000423965 PACS2Q86VP3 889 aa10.89□□□□□ -0.67
CLCN3P1-201ENST00000423965 KCTD12Q96CX2 325 aaKnown RBP10.89□□□□□ -0.67
CLCN3P1-201ENST00000423965 SLC52A2Q9HAB3 445 aa10.89□□□□□ -0.67
CLCN3P1-201ENST00000423965 GBA2Q9HCG7 927 aaPredicted RBP10.89□□□□□ -0.67
CLCN3P1-201ENST00000423965 CDHR2Q9BYE9 1310 aa10.88□□□□□ -0.67
CLCN3P1-201ENST00000423965 SLC10A3P09131 477 aa10.88□□□□□ -0.67
CLCN3P1-201ENST00000423965 USP48Q86UV5 1035 aa10.88□□□□□ -0.67
CLCN3P1-201ENST00000423965 TESK2Q96S53 571 aa10.88□□□□□ -0.67
CLCN3P1-201ENST00000423965 VPS33BQ9H267 617 aa10.88□□□□□ -0.67
CLCN3P1-201ENST00000423965 POLKQ9UBT6 870 aa10.88□□□□□ -0.67
CLCN3P1-201ENST00000423965 TBC1D2BQ9UPU7 963 aa10.88□□□□□ -0.67
CLCN3P1-201ENST00000423965 BCORQ6W2J9 1755 aa10.88□□□□□ -0.67
CLCN3P1-201ENST00000423965 SNED1Q8TER0 1413 aa10.87□□□□□ -0.67
CLCN3P1-201ENST00000423965 IL6STP40189 918 aaPredicted RBP10.87□□□□□ -0.67
CLCN3P1-201ENST00000423965 HIRAP54198 1017 aaPredicted RBP10.87□□□□□ -0.67
CLCN3P1-201ENST00000423965 TPTE2Q6XPS3 522 aa10.87□□□□□ -0.67
CLCN3P1-201ENST00000423965 NPM2Q86SE8 214 aaKnown RBP10.87□□□□□ -0.67
CLCN3P1-201ENST00000423965 NBPF5PQ86XG9 351 aaPredicted RBP10.87□□□□□ -0.67
CLCN3P1-201ENST00000423965 NIM1KQ8IY84 436 aa10.87□□□□□ -0.67
CLCN3P1-201ENST00000423965 TEX13AQ9BXU3 409 aaPredicted RBP10.87□□□□□ -0.67
CLCN3P1-201ENST00000423965 CAMTA2O94983 1202 aa10.86□□□□□ -0.67
CLCN3P1-201ENST00000423965 SLC39A6Q13433 755 aa10.86□□□□□ -0.67
CLCN3P1-201ENST00000423965 RBM26Q5T8P6 1007 aaKnown RBP10.86□□□□□ -0.67
CLCN3P1-201ENST00000423965 CLEC4GQ6UXB4 293 aa10.86□□□□□ -0.67
CLCN3P1-201ENST00000423965 NPDC1Q9NQX5 325 aaPredicted RBP10.86□□□□□ -0.67
CLCN3P1-201ENST00000423965 SEPT9Q9UHD8 586 aaPredicted RBP10.86□□□□□ -0.67
CLCN3P1-201ENST00000423965 ANKRD26Q9UPS8 1709 aa10.86□□□□□ -0.67
CLCN3P1-201ENST00000423965 GPR25O00155 361 aa10.85□□□□□ -0.67
CLCN3P1-201ENST00000423965 TULP1O00294 542 aaPredicted RBP10.85□□□□□ -0.67
CLCN3P1-201ENST00000423965 GMPSP49915 693 aaPredicted RBP10.85□□□□□ -0.67
CLCN3P1-201ENST00000423965 CXCL9Q07325 125 aa10.85□□□□□ -0.67
CLCN3P1-201ENST00000423965 RANBP2P49792 3224 aaKnown RBP10.85□□□□□ -0.67
CLCN3P1-201ENST00000423965 TBC1D8O95759 1140 aa10.84□□□□□ -0.67
CLCN3P1-201ENST00000423965 PADI6Q6TGC4 694 aa10.84□□□□□ -0.67
CLCN3P1-201ENST00000423965 WNT2BQ93097 391 aa10.84□□□□□ -0.67
CLCN3P1-201ENST00000423965 ZNRF3Q9ULT6 936 aa10.84□□□□□ -0.67
CLCN3P1-201ENST00000423965 NPC1L1Q9UHC9 1359 aa10.84□□□□□ -0.67
CLCN3P1-201ENST00000423965 COL4A5P29400 1685 aa10.84□□□□□ -0.67
CLCN3P1-201ENST00000423965 SCN11AQ9UI33 1791 aa10.83□□□□□ -0.68
CLCN3P1-201ENST00000423965 H7C1D1 291 aa10.83□□□□□ -0.68
CLCN3P1-201ENST00000423965 FKTNO75072 461 aa10.83□□□□□ -0.68
CLCN3P1-201ENST00000423965 PTGDRQ13258 359 aa10.83□□□□□ -0.68
CLCN3P1-201ENST00000423965 TNIP1Q15025 636 aa10.83□□□□□ -0.68
CLCN3P1-201ENST00000423965 KRT26Q7Z3Y9 468 aa10.83□□□□□ -0.68
CLCN3P1-201ENST00000423965 BCL2L13Q9BXK5 485 aa10.83□□□□□ -0.68
CLCN3P1-201ENST00000423965 PNMA3Q9UL41 463 aa10.83□□□□□ -0.68
CLCN3P1-201ENST00000423965 NBPF26B4DH59 902 aa10.82□□□□□ -0.68
CLCN3P1-201ENST00000423965 H0YGN5 161 aa10.82□□□□□ -0.68
CLCN3P1-201ENST00000423965 PPIP5K2O43314 1243 aa10.82□□□□□ -0.68
CLCN3P1-201ENST00000423965 EN2P19622 333 aaPredicted RBP10.82□□□□□ -0.68
CLCN3P1-201ENST00000423965 LAPTM4BQ86VI4 370 aa10.82□□□□□ -0.68
CLCN3P1-201ENST00000423965 TRPM4Q8TD43 1214 aa10.82□□□□□ -0.68
CLCN3P1-201ENST00000423965 CFHR5Q9BXR6 569 aa10.82□□□□□ -0.68
CLCN3P1-201ENST00000423965 LGR6Q9HBX8 967 aa10.82□□□□□ -0.68
CLCN3P1-201ENST00000423965 RBM27Q9P2N5 1060 aaKnown RBP10.82□□□□□ -0.68
CLCN3P1-201ENST00000423965 FAM198AQ9UFP1 575 aa10.82□□□□□ -0.68
CLCN3P1-201ENST00000423965 CNOT7Q9UIV1 285 aaKnown RBP10.82□□□□□ -0.68
CLCN3P1-201ENST00000423965 ZNF652Q9Y2D9 606 aa10.82□□□□□ -0.68
CLCN3P1-201ENST00000423965 ZNF330Q9Y3S2 320 aaPredicted RBP10.82□□□□□ -0.68
CLCN3P1-201ENST00000423965 KIF20BQ96Q89 1820 aa10.81□□□□□ -0.68
CLCN3P1-201ENST00000423965 SMAPO00193 183 aa10.81□□□□□ -0.68
CLCN3P1-201ENST00000423965 HOXA10P31260 410 aaPredicted RBP10.81□□□□□ -0.68
CLCN3P1-201ENST00000423965 TM4SF4P48230 202 aa10.81□□□□□ -0.68
CLCN3P1-201ENST00000423965 CRY2Q49AN0 593 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms