RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 SSRP1Q08945 709 aaKnown RBP9.78□□□□□ -0.84
CHD7-201ENST00000423902 TESK2Q96S53 571 aa9.78□□□□□ -0.84
CHD7-201ENST00000423902 CC2D2BQ6DHV5 1058 aa9.78□□□□□ -0.84
CHD7-201ENST00000423902 ERBB4Q15303 1308 aa9.78□□□□□ -0.84
CHD7-201ENST00000423902 DNAJC10Q8IXB1 793 aa9.78□□□□□ -0.84
CHD7-201ENST00000423902 HCLS1P14317 486 aaPredicted RBP9.77□□□□□ -0.84
CHD7-201ENST00000423902 PDCL3Q9H2J4 239 aa9.77□□□□□ -0.84
CHD7-201ENST00000423902 HMG20BQ9P0W2 317 aa9.77□□□□□ -0.84
CHD7-201ENST00000423902 DDX49Q9Y6V7 483 aaKnown RBP9.77□□□□□ -0.84
CHD7-201ENST00000423902 ATP2B4P23634 1241 aa9.77□□□□□ -0.84
CHD7-201ENST00000423902 SLC4A4Q9Y6R1 1079 aa9.77□□□□□ -0.85
CHD7-201ENST00000423902 PPLO60437 1756 aa9.77□□□□□ -0.85
CHD7-201ENST00000423902 TULP4Q9NRJ4 1543 aa9.77□□□□□ -0.85
CHD7-201ENST00000423902 HSP90AA2PQ14568 343 aaPredicted RBP9.77□□□□□ -0.85
CHD7-201ENST00000423902 CASTP20810 708 aaKnown RBP9.77□□□□□ -0.85
CHD7-201ENST00000423902 TMEM67Q5HYA8 995 aa9.77□□□□□ -0.85
CHD7-201ENST00000423902 SETBP1Q9Y6X0 1596 aa9.77□□□□□ -0.85
CHD7-201ENST00000423902 ITGA6P23229 1130 aa9.77□□□□□ -0.85
CHD7-201ENST00000423902 FILIP1LQ4L180 1135 aa9.77□□□□□ -0.85
CHD7-201ENST00000423902 SPC25Q9HBM1 224 aa9.77□□□□□ -0.85
CHD7-201ENST00000423902 SAMM50Q9Y512 469 aa9.77□□□□□ -0.85
CHD7-201ENST00000423902 IFIT1BQ5T764 474 aaKnown RBP9.77□□□□□ -0.85
CHD7-201ENST00000423902 JARID2Q92833 1246 aaPredicted RBP9.77□□□□□ -0.85
CHD7-201ENST00000423902 SPON1Q9HCB6 807 aa9.77□□□□□ -0.85
CHD7-201ENST00000423902 ARHGEF25Q86VW2 580 aa9.77□□□□□ -0.85
CHD7-201ENST00000423902 GOPCQ9HD26 462 aa9.77□□□□□ -0.85
CHD7-201ENST00000423902 MROH2AA6NES4 1674 aa9.77□□□□□ -0.85
CHD7-201ENST00000423902 POTEJP0CG39 1038 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 STK3Q13188 491 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 CCDC39Q9UFE4 941 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 GZF1Q9H116 711 aaPredicted RBP9.76□□□□□ -0.85
CHD7-201ENST00000423902 CCDC194A0A1B0GVG4 234 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 IPO9Q96P70 1041 aaKnown RBP9.76□□□□□ -0.85
CHD7-201ENST00000423902 IL6STP40189 918 aaPredicted RBP9.76□□□□□ -0.85
CHD7-201ENST00000423902 STXBP4Q6ZWJ1 553 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 CCDC125Q86Z20 511 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 NCOA7Q8NI08 942 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 AS3MTQ9HBK9 375 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 MCM9Q9NXL9 1143 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 IQSEC3Q9UPP2 1182 aaPredicted RBP9.76□□□□□ -0.85
CHD7-201ENST00000423902 NAP1L1P55209 391 aaKnown RBP9.76□□□□□ -0.85
CHD7-201ENST00000423902 MAGEB6Q8N7X4 407 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 FAM89AQ96GI7 184 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 BCORL1Q5H9F3 1711 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 C3P01024 1663 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 NLRP5P59047 1200 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 USP48Q86UV5 1035 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 RTKN2Q8IZC4 609 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 FBXO41Q8TF61 875 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 ABT1Q9ULW3 272 aaKnown RBP9.76□□□□□ -0.85
CHD7-201ENST00000423902 VPS72Q15906 364 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 APBB1IPQ7Z5R6 666 aaPredicted RBP9.76□□□□□ -0.85
CHD7-201ENST00000423902 CKAP2LQ8IYA6 745 aa9.76□□□□□ -0.85
CHD7-201ENST00000423902 SMC2O95347 1197 aa9.75□□□□□ -0.85
CHD7-201ENST00000423902 CEP57L1Q8IYX8 460 aa9.75□□□□□ -0.85
CHD7-201ENST00000423902 LUC7LQ9NQ29 371 aaKnown RBP9.75□□□□□ -0.85
CHD7-201ENST00000423902 SNRKQ9NRH2 765 aa9.75□□□□□ -0.85
CHD7-201ENST00000423902 TRIM27P14373 513 aa9.75□□□□□ -0.85
CHD7-201ENST00000423902 RBM27Q9P2N5 1060 aaKnown RBP9.75□□□□□ -0.85
CHD7-201ENST00000423902 GPHNQ9NQX3 736 aaPredicted RBP9.75□□□□□ -0.85
CHD7-201ENST00000423902 CRKLP46109 303 aaKnown RBP9.75□□□□□ -0.85
CHD7-201ENST00000423902 IL27Q8NEV9 243 aa9.75□□□□□ -0.85
CHD7-201ENST00000423902 ERMNQ8TAM6 284 aa9.75□□□□□ -0.85
CHD7-201ENST00000423902 ATF5Q9Y2D1 282 aaPredicted RBP9.75□□□□□ -0.85
CHD7-201ENST00000423902 LMTK2Q8IWU2 1503 aa9.75□□□□□ -0.85
CHD7-201ENST00000423902 TXLNBQ8N3L3 684 aa9.75□□□□□ -0.85
CHD7-201ENST00000423902 PIM2Q9P1W9 311 aa9.75□□□□□ -0.85
CHD7-201ENST00000423902 GRIN3BO60391 1043 aa9.75□□□□□ -0.85
CHD7-201ENST00000423902 MCM5P33992 734 aa9.75□□□□□ -0.85
CHD7-201ENST00000423902 TEX11Q8IYF3 940 aa9.75□□□□□ -0.85
CHD7-201ENST00000423902 SMCR8Q8TEV9 937 aaPredicted RBP9.75□□□□□ -0.85
CHD7-201ENST00000423902 LETM1O95202 739 aaPredicted RBP9.75□□□□□ -0.85
CHD7-201ENST00000423902 ADRA2BP18089 450 aa9.75□□□□□ -0.85
CHD7-201ENST00000423902 RPS8P62241 208 aaKnown RBP9.75□□□□□ -0.85
CHD7-201ENST00000423902 CARD14Q9BXL6 1004 aa9.75□□□□□ -0.85
CHD7-201ENST00000423902 PARD3Q8TEW0 1356 aa9.75□□□□□ -0.85
CHD7-201ENST00000423902 CDK12Q9NYV4 1490 aaPredicted RBP9.75□□□□□ -0.85
CHD7-201ENST00000423902 PTCH1Q13635 1447 aa9.75□□□□□ -0.85
CHD7-201ENST00000423902 WTAPQ15007 396 aa9.75□□□□□ -0.85
CHD7-201ENST00000423902 CCDC93Q567U6 631 aa9.75□□□□□ -0.85
CHD7-201ENST00000423902 PPEF1O14829 653 aaPredicted RBP9.74□□□□□ -0.85
CHD7-201ENST00000423902 NPR1P16066 1061 aa9.74□□□□□ -0.85
CHD7-201ENST00000423902 AATKQ6ZMQ8 1374 aa9.74□□□□□ -0.85
CHD7-201ENST00000423902 VAT1LQ9HCJ6 419 aa9.74□□□□□ -0.85
CHD7-201ENST00000423902 CRB1P82279 1406 aa9.74□□□□□ -0.85
CHD7-201ENST00000423902 GOLGA8BA8MQT2 603 aa9.74□□□□□ -0.85
CHD7-201ENST00000423902 LARP1BQ659C4 914 aaKnown RBP9.74□□□□□ -0.85
CHD7-201ENST00000423902 SLC9C2Q5TAH2 1124 aa9.74□□□□□ -0.85
CHD7-201ENST00000423902 TNPO1Q92973 898 aaKnown RBP9.74□□□□□ -0.85
CHD7-201ENST00000423902 BBOX1O75936 387 aa9.74□□□□□ -0.85
CHD7-201ENST00000423902 ME1P48163 572 aa9.74□□□□□ -0.85
CHD7-201ENST00000423902 IRX3P78415 501 aaPredicted RBP9.74□□□□□ -0.85
CHD7-201ENST00000423902 SPDYE3A6NKU9 549 aa9.74□□□□□ -0.85
CHD7-201ENST00000423902 SUPT20HL1Q3ZLR7 823 aa9.74□□□□□ -0.85
CHD7-201ENST00000423902 CCDC148Q8NFR7 591 aa9.74□□□□□ -0.85
CHD7-201ENST00000423902 BICC1Q9H694 974 aaKnown RBP9.74□□□□□ -0.85
CHD7-201ENST00000423902 CALM1P0DP23 149 aa9.74□□□□□ -0.85
CHD7-201ENST00000423902 CALM2P0DP24 149 aa9.74□□□□□ -0.85
CHD7-201ENST00000423902 CALM3P0DP25 149 aa9.74□□□□□ -0.85
CHD7-201ENST00000423902 TEKT1Q969V4 418 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms