RNA–Protein interactions for RNA: ENST00000423616.1

RHBDD1-204, Transcript of rhomboid domain containing 1, humanhuman

TSL 5

Gene RHBDD1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-204ENST00000423616 EYA3Q99504 573 aa12.71□□□□□ -0.37
RHBDD1-204ENST00000423616 DBNDD1Q9H9R9 158 aa12.71□□□□□ -0.37
RHBDD1-204ENST00000423616 EFCC1Q9HA90 598 aa12.71□□□□□ -0.37
RHBDD1-204ENST00000423616 PSME4Q14997 1843 aa12.7□□□□□ -0.38
RHBDD1-204ENST00000423616 MANSC4A6NHS7 340 aaPredicted RBP12.7□□□□□ -0.38
RHBDD1-204ENST00000423616 UBE2Q2LH0YL09 131 aa12.7□□□□□ -0.38
RHBDD1-204ENST00000423616 ECE2O60344 883 aa12.7□□□□□ -0.38
RHBDD1-204ENST00000423616 SCARF1Q14162 830 aa12.7□□□□□ -0.38
RHBDD1-204ENST00000423616 ARHGEF6Q15052 776 aa12.7□□□□□ -0.38
RHBDD1-204ENST00000423616 SLC4A8Q2Y0W8 1093 aa12.7□□□□□ -0.38
RHBDD1-204ENST00000423616 R3HDMLQ9H3Y0 253 aa12.7□□□□□ -0.38
RHBDD1-204ENST00000423616 KNSTRNQ9Y448 316 aa12.7□□□□□ -0.38
RHBDD1-204ENST00000423616 RTL9Q8NET4 1388 aa12.69□□□□□ -0.38
RHBDD1-204ENST00000423616 VIL1P09327 827 aaKnown RBP12.69□□□□□ -0.38
RHBDD1-204ENST00000423616 KCNA4P22459 653 aa12.69□□□□□ -0.38
RHBDD1-204ENST00000423616 ZNF280AP59817 542 aaPredicted RBP12.69□□□□□ -0.38
RHBDD1-204ENST00000423616 MKRN3Q13064 507 aaKnown RBP12.69□□□□□ -0.38
RHBDD1-204ENST00000423616 SLC9C1Q4G0N8 1177 aa12.69□□□□□ -0.38
RHBDD1-204ENST00000423616 GIGYF2Q6Y7W6 1299 aaKnown RBP12.69□□□□□ -0.38
RHBDD1-204ENST00000423616 ANKRD13DQ6ZTN6 518 aa12.69□□□□□ -0.38
RHBDD1-204ENST00000423616 UTP14AQ9BVJ6 771 aaKnown RBP12.69□□□□□ -0.38
RHBDD1-204ENST00000423616 ASTN2O75129 1339 aaPredicted RBP12.68□□□□□ -0.38
RHBDD1-204ENST00000423616 OTUD7BQ6GQQ9 843 aa12.68□□□□□ -0.38
RHBDD1-204ENST00000423616 MOB2Q70IA6 237 aa12.68□□□□□ -0.38
RHBDD1-204ENST00000423616 ARMC9Q7Z3E5 817 aa12.68□□□□□ -0.38
RHBDD1-204ENST00000423616 IFNL1Q8IU54 200 aa12.68□□□□□ -0.38
RHBDD1-204ENST00000423616 NGEFQ8N5V2 710 aa12.68□□□□□ -0.38
RHBDD1-204ENST00000423616 AGBL3Q8NEM8 1001 aa12.68□□□□□ -0.38
RHBDD1-204ENST00000423616 RTF1Q92541 710 aaKnown RBP12.68□□□□□ -0.38
RHBDD1-204ENST00000423616 ZBTB3Q9H5J0 574 aa12.68□□□□□ -0.38
RHBDD1-204ENST00000423616 SCN9AQ15858 1988 aa12.68□□□□□ -0.38
RHBDD1-204ENST00000423616 TAF1P21675 1872 aa12.68□□□□□ -0.38
RHBDD1-204ENST00000423616 SPRYD7Q5W111 196 aa12.67□□□□□ -0.38
RHBDD1-204ENST00000423616 CD99L2Q8TCZ2 262 aa12.67□□□□□ -0.38
RHBDD1-204ENST00000423616 C6orf229H3BNL8 230 aa12.66□□□□□ -0.38
RHBDD1-204ENST00000423616 ZBTB48P10074 688 aaPredicted RBP12.66□□□□□ -0.38
RHBDD1-204ENST00000423616 GPR153Q6NV75 609 aa12.66□□□□□ -0.38
RHBDD1-204ENST00000423616 TTLL7Q6ZT98 887 aa12.66□□□□□ -0.38
RHBDD1-204ENST00000423616 DPF3Q92784 378 aa12.66□□□□□ -0.38
RHBDD1-204ENST00000423616 HTATIP2Q9BUP3 242 aa12.66□□□□□ -0.38
RHBDD1-204ENST00000423616 PRO3102Q9H379 93 aa12.66□□□□□ -0.38
RHBDD1-204ENST00000423616 MYOZ2Q9NPC6 264 aa12.66□□□□□ -0.38
RHBDD1-204ENST00000423616 NSFL1CQ9UNZ2 370 aaKnown RBP12.66□□□□□ -0.38
RHBDD1-204ENST00000423616 NR2E3Q9Y5X4 410 aa12.66□□□□□ -0.38
RHBDD1-204ENST00000423616 ZNF646O15015 1829 aaPredicted RBP12.65□□□□□ -0.38
RHBDD1-204ENST00000423616 G3V3G9 751 aa12.65□□□□□ -0.38
RHBDD1-204ENST00000423616 RIMBP2O15034 1052 aa12.65□□□□□ -0.38
RHBDD1-204ENST00000423616 U2SURPO15042 1029 aaKnown RBP12.65□□□□□ -0.38
RHBDD1-204ENST00000423616 SP3Q02447 781 aa12.65□□□□□ -0.38
RHBDD1-204ENST00000423616 DCAF8Q5TAQ9 597 aa12.65□□□□□ -0.38
RHBDD1-204ENST00000423616 RSBN1LQ6PCB5 846 aaPredicted RBP12.65□□□□□ -0.38
RHBDD1-204ENST00000423616 VCANP13611 3396 aa12.65□□□□□ -0.38
RHBDD1-204ENST00000423616 ERBB4Q15303 1308 aa12.64□□□□□ -0.39
RHBDD1-204ENST00000423616 USP17L8P0C7I0 530 aa12.64□□□□□ -0.39
RHBDD1-204ENST00000423616 ZC3H12CQ9C0D7 883 aaKnown RBP12.64□□□□□ -0.39
RHBDD1-204ENST00000423616 COL3A1P02461 1466 aaPredicted RBP12.64□□□□□ -0.39
RHBDD1-204ENST00000423616 PTPN12Q05209 780 aaKnown RBP12.63□□□□□ -0.39
RHBDD1-204ENST00000423616 DOK7Q18PE1 504 aa12.63□□□□□ -0.39
RHBDD1-204ENST00000423616 HSP90AB3PQ58FF7 597 aa12.63□□□□□ -0.39
RHBDD1-204ENST00000423616 COL25A1Q9BXS0 654 aaPredicted RBP12.63□□□□□ -0.39
RHBDD1-204ENST00000423616 KCNQ5Q9NR82 932 aa12.63□□□□□ -0.39
RHBDD1-204ENST00000423616 STXBP5LQ9Y2K9 1186 aa12.63□□□□□ -0.39
RHBDD1-204ENST00000423616 RRP7AQ9Y3A4 280 aaKnown RBP12.63□□□□□ -0.39
RHBDD1-204ENST00000423616 COL1A1P02452 1464 aaPredicted RBP12.63□□□□□ -0.39
RHBDD1-204ENST00000423616 UNCXA6NJT0 531 aa12.62□□□□□ -0.39
RHBDD1-204ENST00000423616 MYL6BP14649 208 aa12.62□□□□□ -0.39
RHBDD1-204ENST00000423616 CRHR2Q13324 411 aa12.62□□□□□ -0.39
RHBDD1-204ENST00000423616 LDLRAD1Q5T700 205 aa12.62□□□□□ -0.39
RHBDD1-204ENST00000423616 NKX2-3Q8TAU0 364 aa12.62□□□□□ -0.39
RHBDD1-204ENST00000423616 POLLQ9UGP5 575 aa12.62□□□□□ -0.39
RHBDD1-204ENST00000423616 SH3TC1Q8TE82 1336 aa12.62□□□□□ -0.39
RHBDD1-204ENST00000423616 IGF2BP3O00425 579 aaKnown RBP eCLIP12.61□□□□□ -0.39
RHBDD1-204ENST00000423616 HTATSF1O43719 755 aaKnown RBP12.61□□□□□ -0.39
RHBDD1-204ENST00000423616 MMP14P50281 582 aa12.61□□□□□ -0.39
RHBDD1-204ENST00000423616 AMER1Q5JTC6 1135 aaPredicted RBP12.61□□□□□ -0.39
RHBDD1-204ENST00000423616 APOBEC3FQ8IUX4 373 aaKnown RBP12.61□□□□□ -0.39
RHBDD1-204ENST00000423616 PNISRQ8TF01 805 aaKnown RBP12.61□□□□□ -0.39
RHBDD1-204ENST00000423616 SLC10A4Q96EP9 437 aa12.61□□□□□ -0.39
RHBDD1-204ENST00000423616 PTCH2Q9Y6C5 1203 aa12.61□□□□□ -0.39
RHBDD1-204ENST00000423616 HCLS1P14317 486 aaPredicted RBP12.6□□□□□ -0.39
RHBDD1-204ENST00000423616 TAF7Q15545 349 aaPredicted RBP12.6□□□□□ -0.39
RHBDD1-204ENST00000423616 PRAMEF18Q5VWM3 479 aa12.6□□□□□ -0.39
RHBDD1-204ENST00000423616 MCM10Q7L590 875 aa12.6□□□□□ -0.39
RHBDD1-204ENST00000423616 OGFOD1Q8N543 542 aa12.6□□□□□ -0.39
RHBDD1-204ENST00000423616 TBC1D16Q8TBP0 767 aa12.6□□□□□ -0.39
RHBDD1-204ENST00000423616 ANGEL1Q9UNK9 670 aaKnown RBP12.6□□□□□ -0.39
RHBDD1-204ENST00000423616 PRKAR2BP31323 418 aa12.59□□□□□ -0.39
RHBDD1-204ENST00000423616 GPSM2P81274 684 aa12.59□□□□□ -0.39
RHBDD1-204ENST00000423616 LRCH3Q96II8 777 aa12.59□□□□□ -0.39
RHBDD1-204ENST00000423616 WNK4Q96J92 1243 aa12.59□□□□□ -0.39
RHBDD1-204ENST00000423616 GMLQ99445 158 aa12.59□□□□□ -0.39
RHBDD1-204ENST00000423616 TRMT112Q9UI30 125 aaKnown RBP12.59□□□□□ -0.39
RHBDD1-204ENST00000423616 SOX1O00570 391 aaPredicted RBP12.58□□□□□ -0.4
RHBDD1-204ENST00000423616 GNRH1P01148 92 aa12.58□□□□□ -0.4
RHBDD1-204ENST00000423616 NLRP10Q86W26 655 aa12.58□□□□□ -0.4
RHBDD1-204ENST00000423616 DEFB123Q8N688 67 aa12.58□□□□□ -0.4
RHBDD1-204ENST00000423616 PHACTR3Q96KR7 559 aa12.58□□□□□ -0.4
RHBDD1-204ENST00000423616 PODXL2Q9NZ53 605 aa12.58□□□□□ -0.4
RHBDD1-204ENST00000423616 MYO3BQ8WXR4 1341 aa12.58□□□□□ -0.4
RHBDD1-204ENST00000423616 USP17L3A6NCW0 530 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms