RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 POLD1P28340 1107 aa12.63□□□□□ -0.39
TNC-203ENST00000423613 ARL1P40616 181 aaPredicted RBP12.63□□□□□ -0.39
TNC-203ENST00000423613 MAP3K12Q12852 859 aa12.63□□□□□ -0.39
TNC-203ENST00000423613 RBM26Q5T8P6 1007 aaKnown RBP12.63□□□□□ -0.39
TNC-203ENST00000423613 USH1CQ9Y6N9 552 aa12.63□□□□□ -0.39
TNC-203ENST00000423613 GOLGA8BA8MQT2 603 aa12.63□□□□□ -0.39
TNC-203ENST00000423613 BAG4O95429 457 aaKnown RBP12.63□□□□□ -0.39
TNC-203ENST00000423613 TTC14Q96N46 770 aa12.63□□□□□ -0.39
TNC-203ENST00000423613 VCXQ9H320 206 aa12.63□□□□□ -0.39
TNC-203ENST00000423613 IFT140Q96RY7 1462 aa12.63□□□□□ -0.39
TNC-203ENST00000423613 MRC2Q9UBG0 1479 aa12.63□□□□□ -0.39
TNC-203ENST00000423613 NESP48681 1621 aa12.63□□□□□ -0.39
TNC-203ENST00000423613 SSRP1Q08945 709 aaKnown RBP12.63□□□□□ -0.39
TNC-203ENST00000423613 FSIP1Q8NA03 581 aa12.63□□□□□ -0.39
TNC-203ENST00000423613 DMRT2Q9Y5R5 561 aa12.63□□□□□ -0.39
TNC-203ENST00000423613 GOLGA8AA7E2F4 631 aa12.63□□□□□ -0.39
TNC-203ENST00000423613 PHAXQ9H814 394 aaKnown RBP12.63□□□□□ -0.39
TNC-203ENST00000423613 MKRN1Q9UHC7 482 aaKnown RBP12.63□□□□□ -0.39
TNC-203ENST00000423613 CCDC141Q6ZP82 1450 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 PFDN1O60925 122 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 KIF20AO95235 890 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 RUFY3Q7L099 469 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 CNNM3Q8NE01 707 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 MRFAP1L1Q96HT8 127 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 STMN4Q9H169 189 aaPredicted RBP12.62□□□□□ -0.39
TNC-203ENST00000423613 CTAGE5O15320 804 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 PPFIA3O75145 1194 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 HLA-DOAP06340 250 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 GJB2P29033 226 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 NEDD9Q14511 834 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 PLS1Q14651 629 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 LRSAM1Q6UWE0 723 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 ZNF365Q70YC5 407 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 INTS8Q75QN2 995 aaKnown RBP12.62□□□□□ -0.39
TNC-203ENST00000423613 PRC1O43663 620 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 GSDMBQ8TAX9 411 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 BICDL2A1A5D9 508 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 F8W031 263 aaPredicted RBP12.62□□□□□ -0.39
TNC-203ENST00000423613 TXNDC9O14530 226 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 TBC1D9Q6ZT07 1266 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 MIER3Q7Z3K6 550 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 POTEDQ86YR6 584 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 TRIM7Q9C029 511 aa12.62□□□□□ -0.39
TNC-203ENST00000423613 FGFR1OPO95684 399 aaKnown RBP12.61□□□□□ -0.39
TNC-203ENST00000423613 SKILP12757 684 aa12.61□□□□□ -0.39
TNC-203ENST00000423613 MTIF2P46199 727 aaKnown RBP12.61□□□□□ -0.39
TNC-203ENST00000423613 TSNAXIP1Q2TAA8 658 aa12.61□□□□□ -0.39
TNC-203ENST00000423613 AFAP1L1Q8TED9 768 aa12.61□□□□□ -0.39
TNC-203ENST00000423613 HDAC9Q9UKV0 1011 aa12.61□□□□□ -0.39
TNC-203ENST00000423613 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.61□□□□□ -0.39
TNC-203ENST00000423613 IFIT3O14879 490 aaKnown RBP12.61□□□□□ -0.39
TNC-203ENST00000423613 DBN1Q16643 649 aa12.61□□□□□ -0.39
TNC-203ENST00000423613 AMOTQ4VCS5 1084 aa12.61□□□□□ -0.39
TNC-203ENST00000423613 CCDC50Q8IVM0 306 aa12.61□□□□□ -0.39
TNC-203ENST00000423613 GBP5Q96PP8 586 aa12.61□□□□□ -0.39
TNC-203ENST00000423613 TFIP11Q9UBB9 837 aaKnown RBP12.61□□□□□ -0.39
TNC-203ENST00000423613 NLRP5P59047 1200 aa12.61□□□□□ -0.39
TNC-203ENST00000423613 UVSSAQ2YD98 709 aa12.61□□□□□ -0.39
TNC-203ENST00000423613 TRIM68Q6AZZ1 485 aa12.61□□□□□ -0.39
TNC-203ENST00000423613 EPRSP07814 1512 aaKnown RBP12.61□□□□□ -0.39
TNC-203ENST00000423613 CCDC144CPQ8IYA2 1237 aa12.61□□□□□ -0.39
TNC-203ENST00000423613 C8orf37Q96NL8 207 aa12.61□□□□□ -0.39
TNC-203ENST00000423613 DDX19AQ9NUU7 478 aaKnown RBP12.61□□□□□ -0.39
TNC-203ENST00000423613 IQCA1Q86XH1 822 aa12.61□□□□□ -0.39
TNC-203ENST00000423613 MICAL1Q8TDZ2 1067 aa12.61□□□□□ -0.39
TNC-203ENST00000423613 IFT81Q8WYA0 676 aa12.61□□□□□ -0.39
TNC-203ENST00000423613 TOP2BQ02880 1626 aa12.61□□□□□ -0.39
TNC-203ENST00000423613 XRCC6P12956 609 aaKnown RBP eCLIP12.6□□□□□ -0.39
TNC-203ENST00000423613 PPARDQ03181 441 aa12.6□□□□□ -0.39
TNC-203ENST00000423613 B4GALNT4Q76KP1 1039 aa12.6□□□□□ -0.39
TNC-203ENST00000423613 SYCP3Q8IZU3 236 aa12.6□□□□□ -0.39
TNC-203ENST00000423613 EVI5LQ96CN4 794 aa12.6□□□□□ -0.39
TNC-203ENST00000423613 ACSBG1Q96GR2 724 aa12.6□□□□□ -0.39
TNC-203ENST00000423613 EPSTI1Q96J88 318 aa12.6□□□□□ -0.39
TNC-203ENST00000423613 RAB34Q9BZG1 259 aa12.6□□□□□ -0.39
TNC-203ENST00000423613 ARHGEF11O15085 1522 aa12.6□□□□□ -0.39
TNC-203ENST00000423613 HGSO14964 777 aaPredicted RBP12.6□□□□□ -0.39
TNC-203ENST00000423613 VIMP08670 466 aaKnown RBP12.6□□□□□ -0.39
TNC-203ENST00000423613 KRT13P13646 458 aa12.6□□□□□ -0.39
TNC-203ENST00000423613 PTPRCP08575 1304 aa12.6□□□□□ -0.39
TNC-203ENST00000423613 TOPBP1Q92547 1522 aa12.6□□□□□ -0.39
TNC-203ENST00000423613 PIK3R5Q8WYR1 880 aa12.6□□□□□ -0.39
TNC-203ENST00000423613 TRIM4Q9C037 500 aa12.6□□□□□ -0.39
TNC-203ENST00000423613 STX6O43752 255 aa12.6□□□□□ -0.39
TNC-203ENST00000423613 VPS41P49754 854 aa12.6□□□□□ -0.39
TNC-203ENST00000423613 TACO1Q9BSH4 297 aaKnown RBP12.6□□□□□ -0.39
TNC-203ENST00000423613 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.6□□□□□ -0.39
TNC-203ENST00000423613 A0A087WZG4 1122 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 CCDC194A0A1B0GVG4 234 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 FOXO3O43524 673 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 HCLS1P14317 486 aaPredicted RBP12.59□□□□□ -0.39
TNC-203ENST00000423613 HDXQ7Z353 690 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 RAB11FIP4Q86YS3 637 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 EHBP1Q8NDI1 1231 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 RGS22Q8NE09 1264 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 RASAL2Q9UJF2 1139 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 CTAGE9A4FU28 777 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 MAP7Q14244 749 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 TAF12Q16514 161 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 NBPF14Q5TI25 921 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms