RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 FMNL2Q96PY5 1086 aa18.68■□□□□ 0.58
CDH1-202ENST00000422392 HAUS7Q99871 368 aa18.68■□□□□ 0.58
CDH1-202ENST00000422392 H3BQV1 296 aa18.68■□□□□ 0.58
CDH1-202ENST00000422392 TIMM10P62072 90 aa18.68■□□□□ 0.58
CDH1-202ENST00000422392 KRT32Q14532 448 aa18.68■□□□□ 0.58
CDH1-202ENST00000422392 IFFO2Q5TF58 517 aa18.68■□□□□ 0.58
CDH1-202ENST00000422392 FTOQ9C0B1 505 aaKnown RBP eCLIP18.68■□□□□ 0.58
CDH1-202ENST00000422392 CBX8Q9HC52 389 aa18.68■□□□□ 0.58
CDH1-202ENST00000422392 GOLIM4O00461 696 aa18.67■□□□□ 0.58
CDH1-202ENST00000422392 RESTQ13127 1097 aa18.67■□□□□ 0.58
CDH1-202ENST00000422392 ALS2Q96Q42 1657 aa18.67■□□□□ 0.58
CDH1-202ENST00000422392 PTGS1P23219 599 aa18.67■□□□□ 0.58
CDH1-202ENST00000422392 CASP7P55210 303 aa18.67■□□□□ 0.58
CDH1-202ENST00000422392 KIAA1524Q8TCG1 905 aa18.67■□□□□ 0.58
CDH1-202ENST00000422392 SPTLC3Q9NUV7 552 aa18.67■□□□□ 0.58
CDH1-202ENST00000422392 U3KPZ7 1027 aaPredicted RBP18.66■□□□□ 0.58
CDH1-202ENST00000422392 DCAF5Q96JK2 942 aa18.66■□□□□ 0.58
CDH1-202ENST00000422392 DNAJC25Q9H1X3 360 aa18.66■□□□□ 0.58
CDH1-202ENST00000422392 CABP4P57796 275 aa18.65■□□□□ 0.58
CDH1-202ENST00000422392 CCT2P78371 535 aaKnown RBP18.65■□□□□ 0.58
CDH1-202ENST00000422392 APOBRQ0VD83 1088 aa18.65■□□□□ 0.58
CDH1-202ENST00000422392 CHST3Q7LGC8 479 aa18.65■□□□□ 0.58
CDH1-202ENST00000422392 KBTBD3Q8NAB2 608 aa18.65■□□□□ 0.58
CDH1-202ENST00000422392 ZNF594Q96JF6 807 aaPredicted RBP18.65■□□□□ 0.58
CDH1-202ENST00000422392 CLSTN2Q9H4D0 955 aa18.65■□□□□ 0.58
CDH1-202ENST00000422392 NRBP1Q9UHY1 535 aa18.65■□□□□ 0.58
CDH1-202ENST00000422392 LMTK3Q96Q04 1460 aa18.65■□□□□ 0.58
CDH1-202ENST00000422392 PDIA4P13667 645 aaKnown RBP18.65■□□□□ 0.58
CDH1-202ENST00000422392 TTLL7Q6ZT98 887 aa18.65■□□□□ 0.58
CDH1-202ENST00000422392 ZMYND15Q9H091 742 aa18.65■□□□□ 0.58
CDH1-202ENST00000422392 NCOA5Q9HCD5 579 aaKnown RBP18.65■□□□□ 0.58
CDH1-202ENST00000422392 NAP1L2Q9ULW6 460 aaPredicted RBP18.65■□□□□ 0.58
CDH1-202ENST00000422392 NBPF26B4DH59 902 aa18.64■□□□□ 0.57
CDH1-202ENST00000422392 FOXO4P98177 505 aa18.64■□□□□ 0.57
CDH1-202ENST00000422392 NBPF14Q5TI25 921 aa18.64■□□□□ 0.57
CDH1-202ENST00000422392 NBPF10Q6P3W6 841 aaKnown RBP18.64■□□□□ 0.57
CDH1-202ENST00000422392 ATG9AQ7Z3C6 839 aa18.64■□□□□ 0.57
CDH1-202ENST00000422392 NBPF15Q8N660 670 aa18.64■□□□□ 0.57
CDH1-202ENST00000422392 DDX19AQ9NUU7 478 aaKnown RBP18.64■□□□□ 0.57
CDH1-202ENST00000422392 MYH15Q9Y2K3 1946 aa18.64■□□□□ 0.57
CDH1-202ENST00000422392 LRMPQ12912 555 aa18.64■□□□□ 0.57
CDH1-202ENST00000422392 PLBD2Q8NHP8 589 aa18.64■□□□□ 0.57
CDH1-202ENST00000422392 LRRC24Q50LG9 513 aa18.63■□□□□ 0.57
CDH1-202ENST00000422392 PAG1Q9NWQ8 432 aa18.63■□□□□ 0.57
CDH1-202ENST00000422392 A0A087WWV3 80 aa18.63■□□□□ 0.57
CDH1-202ENST00000422392 CTDNEP1O95476 244 aa18.63■□□□□ 0.57
CDH1-202ENST00000422392 CCDC186Q7Z3E2 898 aa18.63■□□□□ 0.57
CDH1-202ENST00000422392 PRIMPOLQ96LW4 560 aa18.63■□□□□ 0.57
CDH1-202ENST00000422392 C19orf44Q9H6X5 657 aa18.63■□□□□ 0.57
CDH1-202ENST00000422392 COL18A1P39060 1754 aa18.63■□□□□ 0.57
CDH1-202ENST00000422392 GUCY1B3Q02153 619 aa18.62■□□□□ 0.57
CDH1-202ENST00000422392 RBM43Q6ZSC3 357 aaKnown RBP18.62■□□□□ 0.57
CDH1-202ENST00000422392 DRC7Q8IY82 874 aa18.62■□□□□ 0.57
CDH1-202ENST00000422392 TRIM5Q9C035 493 aa18.62■□□□□ 0.57
CDH1-202ENST00000422392 NSUN7Q8NE18 718 aaKnown RBP18.62■□□□□ 0.57
CDH1-202ENST00000422392 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.62■□□□□ 0.57
CDH1-202ENST00000422392 KIF1AQ12756 1690 aa18.62■□□□□ 0.57
CDH1-202ENST00000422392 GOLGA6L6A8MZA4 724 aa18.61■□□□□ 0.57
CDH1-202ENST00000422392 ZNF165P49910 485 aa18.61■□□□□ 0.57
CDH1-202ENST00000422392 ZNF710Q8N1W2 664 aa18.61■□□□□ 0.57
CDH1-202ENST00000422392 MAP7D2Q96T17 732 aa18.61■□□□□ 0.57
CDH1-202ENST00000422392 ZBTB3Q9H5J0 574 aa18.61■□□□□ 0.57
CDH1-202ENST00000422392 SH3TC1Q8TE82 1336 aa18.61■□□□□ 0.57
CDH1-202ENST00000422392 DHX32Q7L7V1 743 aaKnown RBP18.61■□□□□ 0.57
CDH1-202ENST00000422392 SMARCC2Q8TAQ2 1214 aa18.61■□□□□ 0.57
CDH1-202ENST00000422392 PTPDC1A2A3K4 754 aa18.6■□□□□ 0.57
CDH1-202ENST00000422392 PFKFB2O60825 505 aa18.6■□□□□ 0.57
CDH1-202ENST00000422392 A1BGP04217 495 aa18.6■□□□□ 0.57
CDH1-202ENST00000422392 ADD1P35611 737 aaKnown RBP18.6■□□□□ 0.57
CDH1-202ENST00000422392 TTLL5Q6EMB2 1281 aa18.6■□□□□ 0.57
CDH1-202ENST00000422392 KLHL34Q8N239 644 aa18.6■□□□□ 0.57
CDH1-202ENST00000422392 GLI3P10071 1580 aa18.6■□□□□ 0.57
CDH1-202ENST00000422392 H7C1W4 665 aa18.6■□□□□ 0.57
CDH1-202ENST00000422392 HMGN5P82970 282 aaKnown RBP18.6■□□□□ 0.57
CDH1-202ENST00000422392 PUS3Q9BZE2 481 aaKnown RBP18.6■□□□□ 0.57
CDH1-202ENST00000422392 RFX7Q2KHR2 1363 aa18.6■□□□□ 0.57
CDH1-202ENST00000422392 HSPD1P10809 573 aaKnown RBP18.59■□□□□ 0.57
CDH1-202ENST00000422392 E7EWF7 191 aa18.59■□□□□ 0.57
CDH1-202ENST00000422392 ERCC4Q92889 916 aaPredicted RBP18.59■□□□□ 0.57
CDH1-202ENST00000422392 USP28Q96RU2 1077 aa18.59■□□□□ 0.57
CDH1-202ENST00000422392 GOLPH3LQ9H4A5 285 aa18.59■□□□□ 0.57
CDH1-202ENST00000422392 ZSCAN16Q9H4T2 348 aaPredicted RBP18.59■□□□□ 0.57
CDH1-202ENST00000422392 GPHNQ9NQX3 736 aaPredicted RBP18.58■□□□□ 0.57
CDH1-202ENST00000422392 CFAP45Q9UL16 551 aa18.58■□□□□ 0.57
CDH1-202ENST00000422392 MAST3O60307 1309 aa18.58■□□□□ 0.57
CDH1-202ENST00000422392 PALLDQ8WX93 1383 aa18.58■□□□□ 0.57
CDH1-202ENST00000422392 ATF3P18847 181 aa18.58■□□□□ 0.56
CDH1-202ENST00000422392 ZNF75DP51815 510 aa18.58■□□□□ 0.56
CDH1-202ENST00000422392 C11orf57Q6ZUT1 292 aaPredicted RBP18.58■□□□□ 0.56
CDH1-202ENST00000422392 CCDC85AQ96PX6 553 aaPredicted RBP18.58■□□□□ 0.56
CDH1-202ENST00000422392 CWC25Q9NXE8 425 aaPredicted RBP18.58■□□□□ 0.56
CDH1-202ENST00000422392 LAMB4A4D0S4 1761 aa18.57■□□□□ 0.56
CDH1-202ENST00000422392 A0A1B0GUL7 405 aa18.57■□□□□ 0.56
CDH1-202ENST00000422392 M0R2C6 588 aa18.57■□□□□ 0.56
CDH1-202ENST00000422392 TPM3P06753 285 aa18.57■□□□□ 0.56
CDH1-202ENST00000422392 IFIT1P09914 478 aaKnown RBP18.57■□□□□ 0.56
CDH1-202ENST00000422392 EXOSC10Q01780 885 aaKnown RBP18.57■□□□□ 0.56
CDH1-202ENST00000422392 PLA2G4DQ86XP0 818 aa18.57■□□□□ 0.56
CDH1-202ENST00000422392 CCAR1Q8IX12 1150 aaKnown RBP18.57■□□□□ 0.56
CDH1-202ENST00000422392 TDRD7Q8NHU6 1098 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms