RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 SP3Q02447 781 aa16.07■□□□□ 0.16
UFD1-203ENST00000421968 DOK7Q18PE1 504 aa16.07■□□□□ 0.16
UFD1-203ENST00000421968 PPP1R42Q7Z4L9 355 aa16.07■□□□□ 0.16
UFD1-203ENST00000421968 PTCH2Q9Y6C5 1203 aa16.07■□□□□ 0.16
UFD1-203ENST00000421968 MAP3K15Q6ZN16 1313 aa16.07■□□□□ 0.16
UFD1-203ENST00000421968 DUOX1Q9NRD9 1551 aa16.07■□□□□ 0.16
UFD1-203ENST00000421968 VIL1P09327 827 aaKnown RBP16.06■□□□□ 0.16
UFD1-203ENST00000421968 CAP1Q01518 475 aa16.06■□□□□ 0.16
UFD1-203ENST00000421968 KIF6Q6ZMV9 814 aa16.06■□□□□ 0.16
UFD1-203ENST00000421968 Q7L0L9 218 aa16.06■□□□□ 0.16
UFD1-203ENST00000421968 GAS2L2Q8NHY3 880 aa16.06■□□□□ 0.16
UFD1-203ENST00000421968 HTATIP2Q9BUP3 242 aa16.06■□□□□ 0.16
UFD1-203ENST00000421968 C6orf229H3BNL8 230 aa16.05■□□□□ 0.16
UFD1-203ENST00000421968 IGF2BP3O00425 579 aaKnown RBP eCLIP16.05■□□□□ 0.16
UFD1-203ENST00000421968 ZNF280AP59817 542 aaPredicted RBP16.05■□□□□ 0.16
UFD1-203ENST00000421968 CRHR2Q13324 411 aa16.05■□□□□ 0.16
UFD1-203ENST00000421968 PRKG1Q13976 671 aa16.05■□□□□ 0.16
UFD1-203ENST00000421968 DDX46Q7L014 1031 aaKnown RBP16.05■□□□□ 0.16
UFD1-203ENST00000421968 ARMC9Q7Z3E5 817 aa16.05■□□□□ 0.16
UFD1-203ENST00000421968 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.05■□□□□ 0.16
UFD1-203ENST00000421968 KDM3BQ7LBC6 1761 aa16.05■□□□□ 0.16
UFD1-203ENST00000421968 ZBTB7BO15156 539 aaPredicted RBP16.04■□□□□ 0.16
UFD1-203ENST00000421968 SLC10A5Q5PT55 438 aa16.04■□□□□ 0.16
UFD1-203ENST00000421968 GPR153Q6NV75 609 aa16.04■□□□□ 0.16
UFD1-203ENST00000421968 ZNF34Q8IZ26 560 aa16.04■□□□□ 0.16
UFD1-203ENST00000421968 ZBTB3Q9H5J0 574 aa16.04■□□□□ 0.16
UFD1-203ENST00000421968 NSFL1CQ9UNZ2 370 aaKnown RBP16.04■□□□□ 0.16
UFD1-203ENST00000421968 CEMIPQ8WUJ3 1361 aa16.03■□□□□ 0.16
UFD1-203ENST00000421968 COL9A1P20849 921 aa16.03■□□□□ 0.16
UFD1-203ENST00000421968 GRAPQ13588 217 aa16.03■□□□□ 0.16
UFD1-203ENST00000421968 ARHGEF6Q15052 776 aa16.03■□□□□ 0.16
UFD1-203ENST00000421968 TTLL7Q6ZT98 887 aa16.03■□□□□ 0.16
UFD1-203ENST00000421968 GRAPLQ8TC17 118 aaPredicted RBP16.03■□□□□ 0.16
UFD1-203ENST00000421968 SH3TC2Q8TF17 1288 aa16.03■□□□□ 0.16
UFD1-203ENST00000421968 MYOZ2Q9NPC6 264 aa16.03■□□□□ 0.16
UFD1-203ENST00000421968 SCN9AQ15858 1988 aa16.02■□□□□ 0.16
UFD1-203ENST00000421968 TTC28Q96AY4 2481 aa16.02■□□□□ 0.16
UFD1-203ENST00000421968 OTUD7BQ6GQQ9 843 aa16.02■□□□□ 0.16
UFD1-203ENST00000421968 SHISA4Q96DD7 197 aa16.02■□□□□ 0.16
UFD1-203ENST00000421968 MTMR10Q9NXD2 777 aa16.02■□□□□ 0.16
UFD1-203ENST00000421968 DDX60Q8IY21 1712 aaKnown RBP16.02■□□□□ 0.15
UFD1-203ENST00000421968 TAF1P21675 1872 aa16.01■□□□□ 0.15
UFD1-203ENST00000421968 ERBB4Q15303 1308 aa16.01■□□□□ 0.15
UFD1-203ENST00000421968 PARP10Q53GL7 1025 aa16.01■□□□□ 0.15
UFD1-203ENST00000421968 TMC4Q7Z404 712 aa16.01■□□□□ 0.15
UFD1-203ENST00000421968 AGBL3Q8NEM8 1001 aa16.01■□□□□ 0.15
UFD1-203ENST00000421968 SLC10A4Q96EP9 437 aa16.01■□□□□ 0.15
UFD1-203ENST00000421968 EYA3Q99504 573 aa16.01■□□□□ 0.15
UFD1-203ENST00000421968 UTP14AQ9BVJ6 771 aaKnown RBP16.01■□□□□ 0.15
UFD1-203ENST00000421968 STAP2Q9UGK3 403 aa16.01■□□□□ 0.15
UFD1-203ENST00000421968 POLLQ9UGP5 575 aa16.01■□□□□ 0.15
UFD1-203ENST00000421968 G3V3G9 751 aa16■□□□□ 0.15
UFD1-203ENST00000421968 USP17L8P0C7I0 530 aa16■□□□□ 0.15
UFD1-203ENST00000421968 LDLRAD1Q5T700 205 aa16■□□□□ 0.15
UFD1-203ENST00000421968 DCAF8Q5TAQ9 597 aa16■□□□□ 0.15
UFD1-203ENST00000421968 NECTIN2Q92692 538 aa16■□□□□ 0.15
UFD1-203ENST00000421968 PANK3Q9H999 370 aa16■□□□□ 0.15
UFD1-203ENST00000421968 ANGEL1Q9UNK9 670 aaKnown RBP16■□□□□ 0.15
UFD1-203ENST00000421968 RRP7AQ9Y3A4 280 aaKnown RBP16■□□□□ 0.15
UFD1-203ENST00000421968 VCANP13611 3396 aa15.99■□□□□ 0.15
UFD1-203ENST00000421968 DIAPH1O60610 1272 aaKnown RBP15.99■□□□□ 0.15
UFD1-203ENST00000421968 HCLS1P14317 486 aaPredicted RBP15.99■□□□□ 0.15
UFD1-203ENST00000421968 RSBN1LQ6PCB5 846 aaPredicted RBP15.99■□□□□ 0.15
UFD1-203ENST00000421968 LAMB2P55268 1798 aa15.99■□□□□ 0.15
UFD1-203ENST00000421968 ANKRD36CQ5JPF3 1778 aa15.99■□□□□ 0.15
UFD1-203ENST00000421968 ZBTB48P10074 688 aaPredicted RBP15.98■□□□□ 0.15
UFD1-203ENST00000421968 NBPF9Q3BBW0 867 aa15.98■□□□□ 0.15
UFD1-203ENST00000421968 GIGYF2Q6Y7W6 1299 aaKnown RBP15.98■□□□□ 0.15
UFD1-203ENST00000421968 LRRC37AA6NMS7 1700 aa15.97■□□□□ 0.15
UFD1-203ENST00000421968 MYL6BP14649 208 aa15.97■□□□□ 0.15
UFD1-203ENST00000421968 GPSM2P81274 684 aa15.97■□□□□ 0.15
UFD1-203ENST00000421968 NKX2-3Q8TAU0 364 aa15.97■□□□□ 0.15
UFD1-203ENST00000421968 WNK4Q96J92 1243 aa15.97■□□□□ 0.15
UFD1-203ENST00000421968 ZC3H12CQ9C0D7 883 aaKnown RBP15.97■□□□□ 0.15
UFD1-203ENST00000421968 UBE2Q1Q7Z7E8 422 aa15.96■□□□□ 0.15
UFD1-203ENST00000421968 FZD1Q9UP38 647 aa15.96■□□□□ 0.15
UFD1-203ENST00000421968 EVI5O60447 810 aa15.95■□□□□ 0.14
UFD1-203ENST00000421968 MTFR1Q15390 333 aa15.95■□□□□ 0.14
UFD1-203ENST00000421968 TBC1D16Q8TBP0 767 aa15.94■□□□□ 0.14
UFD1-203ENST00000421968 CLMNQ96JQ2 1002 aa15.94■□□□□ 0.14
UFD1-203ENST00000421968 GMLQ99445 158 aa15.94■□□□□ 0.14
UFD1-203ENST00000421968 RAPGEFL1Q9UHV5 662 aa15.94■□□□□ 0.14
UFD1-203ENST00000421968 LAMB4A4D0S4 1761 aa15.93■□□□□ 0.14
UFD1-203ENST00000421968 U2SURPO15042 1029 aaKnown RBP15.93■□□□□ 0.14
UFD1-203ENST00000421968 PTPN18Q99952 460 aa15.93■□□□□ 0.14
UFD1-203ENST00000421968 ZNF646O15015 1829 aaPredicted RBP15.92■□□□□ 0.14
UFD1-203ENST00000421968 SPTBN5Q9NRC6 3674 aaKnown RBP15.92■□□□□ 0.14
UFD1-203ENST00000421968 PLA2G5P39877 138 aa15.92■□□□□ 0.14
UFD1-203ENST00000421968 GJA8P48165 433 aa15.92■□□□□ 0.14
UFD1-203ENST00000421968 MCM10Q7L590 875 aa15.92■□□□□ 0.14
UFD1-203ENST00000421968 LAMB1P07942 1786 aa15.92■□□□□ 0.14
UFD1-203ENST00000421968 RPTORQ8N122 1335 aa15.92■□□□□ 0.14
UFD1-203ENST00000421968 WNT10BO00744 389 aa15.91■□□□□ 0.14
UFD1-203ENST00000421968 FARP2O94887 1054 aaPredicted RBP15.91■□□□□ 0.14
UFD1-203ENST00000421968 RTF1Q92541 710 aaKnown RBP15.91■□□□□ 0.14
UFD1-203ENST00000421968 CELF1Q92879 486 aaKnown RBP15.91■□□□□ 0.14
UFD1-203ENST00000421968 FAM122AQ96E09 287 aa15.91■□□□□ 0.14
UFD1-203ENST00000421968 GJB1P08034 283 aa15.9■□□□□ 0.14
UFD1-203ENST00000421968 BMP8BP34820 402 aa15.9■□□□□ 0.14
UFD1-203ENST00000421968 LRIT3Q3SXY7 679 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms