RNA–Protein interactions for RNA: ENST00000421671.6

LEMD2-202, Transcript of LEM domain containing 2, humanhuman

TSL 3

Gene LEMD2, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-202ENST00000421671 MPNDQ8N594 471 aa25.64■■□□□ 1.7
LEMD2-202ENST00000421671 ANKRD7Q92527 254 aa25.64■■□□□ 1.7
LEMD2-202ENST00000421671 TAF5LO75529 589 aa25.64■■□□□ 1.69
LEMD2-202ENST00000421671 TPM3P06753 285 aa25.64■■□□□ 1.69
LEMD2-202ENST00000421671 HAUS7Q99871 368 aa25.64■■□□□ 1.69
LEMD2-202ENST00000421671 SYT1P21579 422 aa25.63■■□□□ 1.69
LEMD2-202ENST00000421671 TMEM87AQ8NBN3 555 aa25.63■■□□□ 1.69
LEMD2-202ENST00000421671 SMC3Q9UQE7 1217 aa25.63■■□□□ 1.69
LEMD2-202ENST00000421671 ZNF609O15014 1411 aa25.63■■□□□ 1.69
LEMD2-202ENST00000421671 DTNBO60941 627 aa25.63■■□□□ 1.69
LEMD2-202ENST00000421671 KDM4AO75164 1064 aa25.63■■□□□ 1.69
LEMD2-202ENST00000421671 ME3Q16798 604 aa25.63■■□□□ 1.69
LEMD2-202ENST00000421671 TAF3Q5VWG9 929 aa25.63■■□□□ 1.69
LEMD2-202ENST00000421671 C17orf53Q8N3J3 647 aaPredicted RBP25.63■■□□□ 1.69
LEMD2-202ENST00000421671 ZSCAN31Q96LW9 406 aaPredicted RBP25.63■■□□□ 1.69
LEMD2-202ENST00000421671 DNAJC2Q99543 621 aaKnown RBP25.63■■□□□ 1.69
LEMD2-202ENST00000421671 GDPD2Q9HCC8 539 aa25.63■■□□□ 1.69
LEMD2-202ENST00000421671 FEZ1Q99689 392 aa25.62■■□□□ 1.69
LEMD2-202ENST00000421671 TMOD3Q9NYL9 352 aa25.62■■□□□ 1.69
LEMD2-202ENST00000421671 RFX7Q2KHR2 1363 aa25.62■■□□□ 1.69
LEMD2-202ENST00000421671 ZSCAN22P10073 491 aaPredicted RBP25.62■■□□□ 1.69
LEMD2-202ENST00000421671 KIAA1524Q8TCG1 905 aa25.62■■□□□ 1.69
LEMD2-202ENST00000421671 SH2B1Q9NRF2 756 aaPredicted RBP25.62■■□□□ 1.69
LEMD2-202ENST00000421671 LTBP4Q8N2S1 1624 aa25.61■■□□□ 1.69
LEMD2-202ENST00000421671 STX6O43752 255 aa25.61■■□□□ 1.69
LEMD2-202ENST00000421671 ISCA1Q9BUE6 129 aa25.61■■□□□ 1.69
LEMD2-202ENST00000421671 TPCN1Q9ULQ1 816 aa25.61■■□□□ 1.69
LEMD2-202ENST00000421671 FAM177BA6PVY3 158 aa25.6■■□□□ 1.69
LEMD2-202ENST00000421671 USPL1Q5W0Q7 1092 aa25.6■■□□□ 1.69
LEMD2-202ENST00000421671 ZNF594Q96JF6 807 aaPredicted RBP25.6■■□□□ 1.69
LEMD2-202ENST00000421671 ASAP1Q9ULH1 1129 aa25.6■■□□□ 1.69
LEMD2-202ENST00000421671 ITGB4P16144 1822 aa25.6■■□□□ 1.69
LEMD2-202ENST00000421671 CTIFO43310 598 aaKnown RBP25.6■■□□□ 1.69
LEMD2-202ENST00000421671 ADAMTS2O95450 1211 aa25.6■■□□□ 1.69
LEMD2-202ENST00000421671 LRRC24Q50LG9 513 aa25.6■■□□□ 1.69
LEMD2-202ENST00000421671 PSMA5P28066 241 aa25.59■■□□□ 1.69
LEMD2-202ENST00000421671 GJB2P29033 226 aa25.59■■□□□ 1.69
LEMD2-202ENST00000421671 RNF20Q5VTR2 975 aa25.59■■□□□ 1.69
LEMD2-202ENST00000421671 DDX46Q7L014 1031 aaKnown RBP25.59■■□□□ 1.69
LEMD2-202ENST00000421671 PIGBQ92521 554 aa25.59■■□□□ 1.69
LEMD2-202ENST00000421671 SEC62Q99442 399 aaKnown RBP25.59■■□□□ 1.69
LEMD2-202ENST00000421671 CCDC9Q9Y3X0 531 aaKnown RBP25.59■■□□□ 1.69
LEMD2-202ENST00000421671 TSGA10IPQ3SY00 556 aa25.59■■□□□ 1.69
LEMD2-202ENST00000421671 NECAB1Q8N987 351 aa25.59■■□□□ 1.69
LEMD2-202ENST00000421671 GPR108Q9NPR9 543 aa25.59■■□□□ 1.69
LEMD2-202ENST00000421671 SPDYE4A6NLX3 237 aa25.58■■□□□ 1.69
LEMD2-202ENST00000421671 RIOK3O14730 519 aaKnown RBP25.58■■□□□ 1.69
LEMD2-202ENST00000421671 TIMM10P62072 90 aa25.58■■□□□ 1.69
LEMD2-202ENST00000421671 CCDC129Q6ZRS4 1044 aa25.58■■□□□ 1.69
LEMD2-202ENST00000421671 DNAJC10Q8IXB1 793 aa25.58■■□□□ 1.69
LEMD2-202ENST00000421671 TCEANC2Q96MN5 208 aa25.58■■□□□ 1.69
LEMD2-202ENST00000421671 IL15P40933 162 aaPredicted RBP25.58■■□□□ 1.68
LEMD2-202ENST00000421671 PIP4K2BP78356 416 aa25.58■■□□□ 1.68
LEMD2-202ENST00000421671 EYA2O00167 538 aa25.57■■□□□ 1.68
LEMD2-202ENST00000421671 HCLS1P14317 486 aaPredicted RBP25.57■■□□□ 1.68
LEMD2-202ENST00000421671 RPS6KB1P23443 525 aa25.57■■□□□ 1.68
LEMD2-202ENST00000421671 TCIRG1Q13488 830 aa25.57■■□□□ 1.68
LEMD2-202ENST00000421671 BLOC1S2Q6QNY1 142 aa25.57■■□□□ 1.68
LEMD2-202ENST00000421671 NEUROD6Q96NK8 337 aa25.57■■□□□ 1.68
LEMD2-202ENST00000421671 HMG20BQ9P0W2 317 aa25.57■■□□□ 1.68
LEMD2-202ENST00000421671 COL16A1Q07092 1604 aaPredicted RBP25.57■■□□□ 1.68
LEMD2-202ENST00000421671 F13A1P00488 732 aa25.57■■□□□ 1.68
LEMD2-202ENST00000421671 KBTBD3Q8NAB2 608 aa25.56■■□□□ 1.68
LEMD2-202ENST00000421671 PUS3Q9BZE2 481 aaKnown RBP25.56■■□□□ 1.68
LEMD2-202ENST00000421671 ATG3Q9NT62 314 aa25.56■■□□□ 1.68
LEMD2-202ENST00000421671 ALDH8A1Q9H2A2 487 aaPredicted RBP25.55■■□□□ 1.68
LEMD2-202ENST00000421671 MTMR6Q9Y217 621 aa25.55■■□□□ 1.68
LEMD2-202ENST00000421671 CNPY2Q9Y2B0 182 aa25.55■■□□□ 1.68
LEMD2-202ENST00000421671 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.55■■□□□ 1.68
LEMD2-202ENST00000421671 TOB2Q14106 344 aaPredicted RBP25.55■■□□□ 1.68
LEMD2-202ENST00000421671 ZNF330Q9Y3S2 320 aaPredicted RBP25.55■■□□□ 1.68
LEMD2-202ENST00000421671 AHDC1Q5TGY3 1603 aaPredicted RBP25.55■■□□□ 1.68
LEMD2-202ENST00000421671 U2AF2P26368 475 aaKnown RBP eCLIP25.54■■□□□ 1.683e-14■■■■■ 35.3
LEMD2-202ENST00000421671 MCMDC2Q4G0Z9 681 aa25.54■■□□□ 1.68
LEMD2-202ENST00000421671 OGFRQ9NZT2 677 aa25.54■■□□□ 1.68
LEMD2-202ENST00000421671 PALLDQ8WX93 1383 aa25.54■■□□□ 1.68
LEMD2-202ENST00000421671 CIAO1O76071 339 aa25.54■■□□□ 1.68
LEMD2-202ENST00000421671 DISP2A7MBM2 1401 aa25.53■■□□□ 1.68
LEMD2-202ENST00000421671 NUTM2BA6NNL0 878 aaPredicted RBP25.53■■□□□ 1.68
LEMD2-202ENST00000421671 NUTM2EB1AL46 878 aaPredicted RBP25.53■■□□□ 1.68
LEMD2-202ENST00000421671 UBE2HP62256 183 aa25.53■■□□□ 1.68
LEMD2-202ENST00000421671 NUTM2AQ8IVF1 878 aaPredicted RBP25.53■■□□□ 1.68
LEMD2-202ENST00000421671 TRIM28Q13263 835 aaKnown RBP25.53■■□□□ 1.68
LEMD2-202ENST00000421671 SLFNL1Q499Z3 407 aa25.53■■□□□ 1.68
LEMD2-202ENST00000421671 GOLGA6L6A8MZA4 724 aa25.52■■□□□ 1.68
LEMD2-202ENST00000421671 GOLIM4O00461 696 aa25.52■■□□□ 1.68
LEMD2-202ENST00000421671 SYCP1Q15431 976 aa25.52■■□□□ 1.68
LEMD2-202ENST00000421671 PAG1Q9NWQ8 432 aa25.52■■□□□ 1.68
LEMD2-202ENST00000421671 SH3TC1Q8TE82 1336 aa25.52■■□□□ 1.68
LEMD2-202ENST00000421671 TEX13AQ9BXU3 409 aaPredicted RBP25.52■■□□□ 1.68
LEMD2-202ENST00000421671 A0A1B0GUL7 405 aa25.51■■□□□ 1.67
LEMD2-202ENST00000421671 KCNF1Q9H3M0 494 aa25.51■■□□□ 1.67
LEMD2-202ENST00000421671 COL14A1Q05707 1796 aaKnown RBP25.51■■□□□ 1.67
LEMD2-202ENST00000421671 ANKRD1Q15327 319 aa25.51■■□□□ 1.67
LEMD2-202ENST00000421671 PYCARDQ9ULZ3 195 aa25.51■■□□□ 1.67
LEMD2-202ENST00000421671 CYP21A2P08686 494 aa25.5■■□□□ 1.67
LEMD2-202ENST00000421671 FUCA2Q9BTY2 467 aa25.5■■□□□ 1.67
LEMD2-202ENST00000421671 U3KPZ7 1027 aaPredicted RBP25.5■■□□□ 1.67
LEMD2-202ENST00000421671 FAM89AQ96GI7 184 aa25.49■■□□□ 1.67
LEMD2-202ENST00000421671 SLC4A9Q96Q91 983 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms