RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 MRS2Q9HD23 443 aa24.3■■□□□ 1.48
VARS2-202ENST00000421263 KCNQ5Q9NR82 932 aa24.3■■□□□ 1.48
VARS2-202ENST00000421263 SLC4A2P04920 1241 aa24.29■■□□□ 1.48
VARS2-202ENST00000421263 DOK7Q18PE1 504 aa24.29■■□□□ 1.48
VARS2-202ENST00000421263 MICALL2Q8IY33 904 aa24.29■■□□□ 1.48
VARS2-202ENST00000421263 GPR101Q96P66 508 aaPredicted RBP24.29■■□□□ 1.48
VARS2-202ENST00000421263 ZC3H12CQ9C0D7 883 aaKnown RBP24.29■■□□□ 1.48
VARS2-202ENST00000421263 TLL2Q9Y6L7 1015 aa24.29■■□□□ 1.48
VARS2-202ENST00000421263 RTL9Q8NET4 1388 aa24.29■■□□□ 1.48
VARS2-202ENST00000421263 ANP32CO43423 234 aa24.28■■□□□ 1.48
VARS2-202ENST00000421263 RPS12P25398 132 aaKnown RBP24.28■■□□□ 1.48
VARS2-202ENST00000421263 GLIS2Q9BZE0 524 aaPredicted RBP24.28■■□□□ 1.48
VARS2-202ENST00000421263 PRDM10Q9NQV6 1147 aa24.28■■□□□ 1.48
VARS2-202ENST00000421263 NEURL1BA8MQ27 555 aa24.27■■□□□ 1.48
VARS2-202ENST00000421263 NEXNQ0ZGT2 675 aa24.27■■□□□ 1.48
VARS2-202ENST00000421263 CDC37L1Q7L3B6 337 aa24.27■■□□□ 1.48
VARS2-202ENST00000421263 WDR63Q8IWG1 891 aa24.27■■□□□ 1.48
VARS2-202ENST00000421263 TTLL11Q8NHH1 800 aa24.27■■□□□ 1.48
VARS2-202ENST00000421263 CCDC85AQ96PX6 553 aaPredicted RBP24.27■■□□□ 1.48
VARS2-202ENST00000421263 ANKIB1Q9P2G1 1089 aa24.27■■□□□ 1.48
VARS2-202ENST00000421263 GGA1Q9UJY5 639 aa24.27■■□□□ 1.48
VARS2-202ENST00000421263 H7C1W4 665 aa24.26■■□□□ 1.47
VARS2-202ENST00000421263 VIL1P09327 827 aaKnown RBP24.26■■□□□ 1.47
VARS2-202ENST00000421263 CTCFP49711 727 aaPredicted RBP24.26■■□□□ 1.47
VARS2-202ENST00000421263 CTSWP56202 376 aa24.26■■□□□ 1.47
VARS2-202ENST00000421263 CWF19L2Q2TBE0 894 aaKnown RBP24.26■■□□□ 1.47
VARS2-202ENST00000421263 ANKRD18AQ8IVF6 992 aa24.26■■□□□ 1.47
VARS2-202ENST00000421263 CAPNS2Q96L46 248 aa24.26■■□□□ 1.47
VARS2-202ENST00000421263 UFL1O94874 794 aa24.25■■□□□ 1.47
VARS2-202ENST00000421263 ECE1P42892 770 aa24.25■■□□□ 1.47
VARS2-202ENST00000421263 MAP2K1Q02750 393 aaPredicted RBP24.25■■□□□ 1.47
VARS2-202ENST00000421263 SAMD7Q7Z3H4 446 aa24.25■■□□□ 1.47
VARS2-202ENST00000421263 SAPCD2Q86UD0 394 aa24.25■■□□□ 1.47
VARS2-202ENST00000421263 AIDAQ96BJ3 306 aa24.25■■□□□ 1.47
VARS2-202ENST00000421263 VAMP4O75379 141 aa24.24■■□□□ 1.47
VARS2-202ENST00000421263 CELF2O95319 508 aaKnown RBP24.24■■□□□ 1.47
VARS2-202ENST00000421263 HHIPL1Q96JK4 782 aa24.24■■□□□ 1.47
VARS2-202ENST00000421263 FANCIQ9NVI1 1328 aa24.24■■□□□ 1.47
VARS2-202ENST00000421263 SCN9AQ15858 1988 aa24.23■■□□□ 1.47
VARS2-202ENST00000421263 EGFRP00533 1210 aa24.23■■□□□ 1.47
VARS2-202ENST00000421263 ATP2B4P23634 1241 aa24.23■■□□□ 1.47
VARS2-202ENST00000421263 FLIIQ13045 1269 aa24.23■■□□□ 1.47
VARS2-202ENST00000421263 CYP4F22Q6NT55 531 aa24.23■■□□□ 1.47
VARS2-202ENST00000421263 CDC5LQ99459 802 aaKnown RBP24.23■■□□□ 1.47
VARS2-202ENST00000421263 BSDC1Q9NW68 430 aaPredicted RBP24.23■■□□□ 1.47
VARS2-202ENST00000421263 XDHP47989 1333 aa24.23■■□□□ 1.47
VARS2-202ENST00000421263 GREM2Q9H772 168 aa24.22■■□□□ 1.47
VARS2-202ENST00000421263 THSD7BQ9C0I4 1608 aa24.21■■□□□ 1.47
VARS2-202ENST00000421263 GCKRQ14397 625 aa24.21■■□□□ 1.47
VARS2-202ENST00000421263 TBC1D10BQ4KMP7 808 aaPredicted RBP24.21■■□□□ 1.47
VARS2-202ENST00000421263 USP48Q86UV5 1035 aa24.21■■□□□ 1.47
VARS2-202ENST00000421263 PLA2G12BQ9BX93 195 aa24.21■■□□□ 1.47
VARS2-202ENST00000421263 CACNA1FO60840 1977 aa24.21■■□□□ 1.47
VARS2-202ENST00000421263 CASP7P55210 303 aa24.2■■□□□ 1.46
VARS2-202ENST00000421263 MINPP1Q9UNW1 487 aa24.2■■□□□ 1.46
VARS2-202ENST00000421263 SALL2Q9Y467 1007 aaPredicted RBP24.2■■□□□ 1.46
VARS2-202ENST00000421263 MYH3P11055 1940 aa24.2■■□□□ 1.46
VARS2-202ENST00000421263 ZNF609O15014 1411 aa24.19■■□□□ 1.46
VARS2-202ENST00000421263 WTIPA6NIX2 430 aaPredicted RBP24.19■■□□□ 1.46
VARS2-202ENST00000421263 G3V3G9 751 aa24.19■■□□□ 1.46
VARS2-202ENST00000421263 HSPA8P11142 646 aaKnown RBP24.19■■□□□ 1.46
VARS2-202ENST00000421263 MAP2K2P36507 400 aa24.19■■□□□ 1.46
VARS2-202ENST00000421263 LBX1P52954 281 aa24.19■■□□□ 1.46
VARS2-202ENST00000421263 EXOSC9Q06265 439 aaKnown RBP24.19■■□□□ 1.46
VARS2-202ENST00000421263 DCAF8Q5TAQ9 597 aa24.19■■□□□ 1.46
VARS2-202ENST00000421263 UBE3BQ7Z3V4 1068 aa24.19■■□□□ 1.46
VARS2-202ENST00000421263 PODNQ7Z5L7 613 aa24.19■■□□□ 1.46
VARS2-202ENST00000421263 AGBL3Q8NEM8 1001 aa24.19■■□□□ 1.46
VARS2-202ENST00000421263 DNAAF4Q8WXU2 420 aa24.19■■□□□ 1.46
VARS2-202ENST00000421263 CSF1RP07333 972 aa24.18■■□□□ 1.46
VARS2-202ENST00000421263 PAXIP1Q6ZW49 1069 aaPredicted RBP24.18■■□□□ 1.46
VARS2-202ENST00000421263 LINS1Q8NG48 757 aa24.18■■□□□ 1.46
VARS2-202ENST00000421263 GMLQ99445 158 aa24.18■■□□□ 1.46
VARS2-202ENST00000421263 SPINK5Q9NQ38 1064 aaPredicted RBP24.18■■□□□ 1.46
VARS2-202ENST00000421263 POLR2AP24928 1970 aaKnown RBP24.18■■□□□ 1.46
VARS2-202ENST00000421263 ZNF280AP59817 542 aaPredicted RBP24.17■■□□□ 1.46
VARS2-202ENST00000421263 FKBP5Q13451 457 aaPredicted RBP24.17■■□□□ 1.46
VARS2-202ENST00000421263 RBM26Q5T8P6 1007 aaKnown RBP24.17■■□□□ 1.46
VARS2-202ENST00000421263 RSBN1LQ6PCB5 846 aaPredicted RBP24.17■■□□□ 1.46
VARS2-202ENST00000421263 DLK2Q6UY11 383 aa24.17■■□□□ 1.46
VARS2-202ENST00000421263 KIF4BQ2VIQ3 1234 aa24.16■■□□□ 1.46
VARS2-202ENST00000421263 MYH16Q9H6N6 1097 aa24.16■■□□□ 1.46
VARS2-202ENST00000421263 ZNF408Q9H9D4 720 aa24.16■■□□□ 1.46
VARS2-202ENST00000421263 PSME4Q14997 1843 aa24.16■■□□□ 1.46
VARS2-202ENST00000421263 CAPN15O75808 1086 aa24.15■■□□□ 1.46
VARS2-202ENST00000421263 CCT4P50991 539 aaKnown RBP24.15■■□□□ 1.46
VARS2-202ENST00000421263 KRT26Q7Z3Y9 468 aa24.15■■□□□ 1.46
VARS2-202ENST00000421263 DCPSQ96C86 337 aaKnown RBP24.15■■□□□ 1.46
VARS2-202ENST00000421263 MED23Q9ULK4 1368 aa24.15■■□□□ 1.46
VARS2-202ENST00000421263 AOC2O75106 756 aa24.14■■□□□ 1.45
VARS2-202ENST00000421263 GRM1Q13255 1194 aa24.14■■□□□ 1.45
VARS2-202ENST00000421263 USP17L3A6NCW0 530 aa24.13■■□□□ 1.45
VARS2-202ENST00000421263 USP17L4A6NCW7 530 aa24.13■■□□□ 1.45
VARS2-202ENST00000421263 ITGA6P23229 1130 aa24.13■■□□□ 1.45
VARS2-202ENST00000421263 USP17L1Q7RTZ2 530 aa24.13■■□□□ 1.45
VARS2-202ENST00000421263 LEMD3Q9Y2U8 911 aa24.13■■□□□ 1.45
VARS2-202ENST00000421263 IGHMBP2P38935 993 aaKnown RBP24.12■■□□□ 1.45
VARS2-202ENST00000421263 ADM5C9JUS6 153 aa24.11■■□□□ 1.45
VARS2-202ENST00000421263 BEND3Q5T5X7 828 aa24.11■■□□□ 1.45
VARS2-202ENST00000421263 BEGAINQ9BUH8 593 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms