RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 RTL9Q8NET4 1388 aa17.13■□□□□ 0.33
AP000550.1-201ENST00000420508 POLR3DP05423 398 aaPredicted RBP17.12■□□□□ 0.33
AP000550.1-201ENST00000420508 TOP1P11387 765 aaKnown RBP17.12■□□□□ 0.33
AP000550.1-201ENST00000420508 KLF18A0A0U1RQI7 1052 aa17.12■□□□□ 0.33
AP000550.1-201ENST00000420508 CCT2P78371 535 aaKnown RBP17.12■□□□□ 0.33
AP000550.1-201ENST00000420508 NOM1Q5C9Z4 860 aaKnown RBP17.12■□□□□ 0.33
AP000550.1-201ENST00000420508 LRRC27Q9C0I9 530 aa17.12■□□□□ 0.33
AP000550.1-201ENST00000420508 NYXQ9GZU5 481 aa17.12■□□□□ 0.33
AP000550.1-201ENST00000420508 PHF23Q9BUL5 403 aaPredicted RBP17.12■□□□□ 0.33
AP000550.1-201ENST00000420508 ALKQ9UM73 1620 aa17.12■□□□□ 0.33
AP000550.1-201ENST00000420508 GPTP24298 496 aa17.12■□□□□ 0.33
AP000550.1-201ENST00000420508 CWF19L2Q2TBE0 894 aaKnown RBP17.12■□□□□ 0.33
AP000550.1-201ENST00000420508 KDM4AO75164 1064 aa17.11■□□□□ 0.33
AP000550.1-201ENST00000420508 LTKP29376 864 aa17.11■□□□□ 0.33
AP000550.1-201ENST00000420508 RDXP35241 583 aaKnown RBP17.11■□□□□ 0.33
AP000550.1-201ENST00000420508 IBTKQ9P2D0 1353 aaPredicted RBP17.11■□□□□ 0.33
AP000550.1-201ENST00000420508 EYA2O00167 538 aa17.11■□□□□ 0.33
AP000550.1-201ENST00000420508 WTAPQ15007 396 aa17.11■□□□□ 0.33
AP000550.1-201ENST00000420508 TMEM266Q2M3C6 531 aa17.11■□□□□ 0.33
AP000550.1-201ENST00000420508 HSPA4P34932 840 aa17.11■□□□□ 0.33
AP000550.1-201ENST00000420508 UTP14AQ9BVJ6 771 aaKnown RBP17.11■□□□□ 0.33
AP000550.1-201ENST00000420508 PA2G4Q9UQ80 394 aaKnown RBP17.11■□□□□ 0.33
AP000550.1-201ENST00000420508 ZNF445P59923 1031 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 ANKRD18AQ8IVF6 992 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 TMOD2Q9NZR1 351 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 STAP2Q9UGK3 403 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 PAXBP1Q9Y5B6 917 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 PARP10Q53GL7 1025 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 MTMR7Q9Y216 660 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 CNPY2Q9Y2B0 182 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 CCDC194A0A1B0GVG4 234 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 ERVV-2B6SEH9 535 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 RANBP6O60518 1105 aaKnown RBP17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 MCM3P25205 808 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 AMPD3Q01432 767 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 TNNI3KQ59H18 835 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 RMND1Q9NWS8 449 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 FBXO3Q9UK99 471 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 FPGT-TNNI3KV9GXZ4 949 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 RPS6KB1P23443 525 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 TICAM2Q86XR7 235 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 DEF6Q9H4E7 631 aa17.1■□□□□ 0.33
AP000550.1-201ENST00000420508 DYNC1I1O14576 645 aa17.09■□□□□ 0.33
AP000550.1-201ENST00000420508 TFCP2Q12800 502 aa17.09■□□□□ 0.33
AP000550.1-201ENST00000420508 NCAPD2Q15021 1401 aa17.09■□□□□ 0.33
AP000550.1-201ENST00000420508 RPGRQ92834 1020 aaKnown RBP17.09■□□□□ 0.33
AP000550.1-201ENST00000420508 TFIP11Q9UBB9 837 aaKnown RBP17.09■□□□□ 0.33
AP000550.1-201ENST00000420508 CKAP2LQ8IYA6 745 aa17.09■□□□□ 0.33
AP000550.1-201ENST00000420508 TSG101Q99816 390 aa17.09■□□□□ 0.33
AP000550.1-201ENST00000420508 GDPD2Q9HCC8 539 aa17.09■□□□□ 0.33
AP000550.1-201ENST00000420508 ZKSCAN5Q9Y2L8 839 aa17.09■□□□□ 0.33
AP000550.1-201ENST00000420508 ARHGAP29Q52LW3 1261 aa17.08■□□□□ 0.33
AP000550.1-201ENST00000420508 FAM114A1Q8IWE2 563 aa17.08■□□□□ 0.33
AP000550.1-201ENST00000420508 CCDC148Q8NFR7 591 aa17.08■□□□□ 0.33
AP000550.1-201ENST00000420508 NLRP5P59047 1200 aa17.08■□□□□ 0.32
AP000550.1-201ENST00000420508 FKBP15Q5T1M5 1219 aa17.08■□□□□ 0.32
AP000550.1-201ENST00000420508 TRAF1Q13077 416 aa17.08■□□□□ 0.32
AP000550.1-201ENST00000420508 UBXN4Q92575 508 aa17.08■□□□□ 0.32
AP000550.1-201ENST00000420508 ANKIB1Q9P2G1 1089 aa17.08■□□□□ 0.32
AP000550.1-201ENST00000420508 CGNQ9P2M7 1197 aaKnown RBP17.08■□□□□ 0.32
AP000550.1-201ENST00000420508 POTEB2H3BUK9 544 aa17.08■□□□□ 0.32
AP000550.1-201ENST00000420508 SPAG1Q07617 926 aa17.08■□□□□ 0.32
AP000550.1-201ENST00000420508 GCKRQ14397 625 aa17.08■□□□□ 0.32
AP000550.1-201ENST00000420508 NBPF6Q5VWK0 638 aa17.08■□□□□ 0.32
AP000550.1-201ENST00000420508 NECAB1Q8N987 351 aa17.08■□□□□ 0.32
AP000550.1-201ENST00000420508 NBPF4Q96M43 638 aa17.08■□□□□ 0.32
AP000550.1-201ENST00000420508 PNPLA6Q8IY17 1366 aa17.07■□□□□ 0.32
AP000550.1-201ENST00000420508 PPRC1Q5VV67 1664 aaKnown RBP17.07■□□□□ 0.32
AP000550.1-201ENST00000420508 PRC1O43663 620 aa17.07■□□□□ 0.32
AP000550.1-201ENST00000420508 CT47A1Q5JQC4 288 aaPredicted RBP17.07■□□□□ 0.32
AP000550.1-201ENST00000420508 BICDL1Q6ZP65 573 aa17.07■□□□□ 0.32
AP000550.1-201ENST00000420508 ALG1Q9BT22 464 aa17.07■□□□□ 0.32
AP000550.1-201ENST00000420508 SNRKQ9NRH2 765 aa17.07■□□□□ 0.32
AP000550.1-201ENST00000420508 SNX14Q9Y5W7 946 aa17.07■□□□□ 0.32
AP000550.1-201ENST00000420508 ROBO2Q9HCK4 1378 aa17.07■□□□□ 0.32
AP000550.1-201ENST00000420508 RTN1Q16799 776 aa17.07■□□□□ 0.32
AP000550.1-201ENST00000420508 SYKP43405 635 aa17.07■□□□□ 0.32
AP000550.1-201ENST00000420508 SYCP1Q15431 976 aa17.07■□□□□ 0.32
AP000550.1-201ENST00000420508 CTAGE1Q96RT6 745 aa17.07■□□□□ 0.32
AP000550.1-201ENST00000420508 IQGAP1P46940 1657 aa17.07■□□□□ 0.32
AP000550.1-201ENST00000420508 NBPF7P0C2Y1 421 aaPredicted RBP17.07■□□□□ 0.32
AP000550.1-201ENST00000420508 KAT14Q9H8E8 782 aa17.07■□□□□ 0.32
AP000550.1-201ENST00000420508 CDC42BPGQ6DT37 1551 aa17.06■□□□□ 0.32
AP000550.1-201ENST00000420508 HCLS1P14317 486 aaPredicted RBP17.06■□□□□ 0.32
AP000550.1-201ENST00000420508 ATP5JP18859 108 aa17.06■□□□□ 0.32
AP000550.1-201ENST00000420508 SYT1P21579 422 aa17.06■□□□□ 0.32
AP000550.1-201ENST00000420508 EIF5P55010 431 aaKnown RBP17.06■□□□□ 0.32
AP000550.1-201ENST00000420508 TMEM87BQ96K49 555 aa17.06■□□□□ 0.32
AP000550.1-201ENST00000420508 ERLIN2O94905 339 aa17.06■□□□□ 0.32
AP000550.1-201ENST00000420508 GUCY1B3Q02153 619 aa17.06■□□□□ 0.32
AP000550.1-201ENST00000420508 SLC9C2Q5TAH2 1124 aa17.06■□□□□ 0.32
AP000550.1-201ENST00000420508 ANKRD2Q9GZV1 360 aa17.06■□□□□ 0.32
AP000550.1-201ENST00000420508 KIF5CO60282 957 aa17.06■□□□□ 0.32
AP000550.1-201ENST00000420508 MICU3Q86XE3 530 aa17.06■□□□□ 0.32
AP000550.1-201ENST00000420508 DZIP3Q86Y13 1208 aaKnown RBP17.06■□□□□ 0.32
AP000550.1-201ENST00000420508 KBTBD3Q8NAB2 608 aa17.06■□□□□ 0.32
AP000550.1-201ENST00000420508 PPP1R12BO60237 982 aaPredicted RBP17.05■□□□□ 0.32
AP000550.1-201ENST00000420508 EHMT1Q9H9B1 1298 aa17.05■□□□□ 0.32
AP000550.1-201ENST00000420508 PNMA6EA0A0J9YXQ4 647 aa17.05■□□□□ 0.32
AP000550.1-201ENST00000420508 SLC27A2O14975 620 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms