RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 MEIS3Q99687 375 aa7.2□□□□□ -1.26
CHD2-202ENST00000420239 ATG3Q9NT62 314 aa7.2□□□□□ -1.26
CHD2-202ENST00000420239 LCMT1Q9UIC8 334 aa7.2□□□□□ -1.26
CHD2-202ENST00000420239 ARHGEF10O15013 1369 aa7.19□□□□□ -1.26
CHD2-202ENST00000420239 CHL1O00533 1208 aa7.19□□□□□ -1.26
CHD2-202ENST00000420239 SLU7O95391 586 aaKnown RBP7.19□□□□□ -1.26
CHD2-202ENST00000420239 LARGE1O95461 756 aa7.19□□□□□ -1.26
CHD2-202ENST00000420239 BMS1Q14692 1282 aaKnown RBP7.19□□□□□ -1.26
CHD2-202ENST00000420239 NUDT18Q6ZVK8 323 aa7.19□□□□□ -1.26
CHD2-202ENST00000420239 MTMR6Q9Y217 621 aa7.19□□□□□ -1.26
CHD2-202ENST00000420239 EXOC6BQ9Y2D4 811 aa7.19□□□□□ -1.26
CHD2-202ENST00000420239 CACNA1FO60840 1977 aa7.19□□□□□ -1.26
CHD2-202ENST00000420239 SETD1AO15047 1707 aaKnown RBP7.19□□□□□ -1.26
CHD2-202ENST00000420239 DHX16O60231 1041 aaKnown RBP7.19□□□□□ -1.26
CHD2-202ENST00000420239 CAMK4Q16566 473 aa7.19□□□□□ -1.26
CHD2-202ENST00000420239 MAP3K11Q16584 847 aa7.19□□□□□ -1.26
CHD2-202ENST00000420239 RUFY3Q7L099 469 aa7.19□□□□□ -1.26
CHD2-202ENST00000420239 ADAMTS19Q8TE59 1207 aa7.19□□□□□ -1.26
CHD2-202ENST00000420239 TRIM5Q9C035 493 aa7.19□□□□□ -1.26
CHD2-202ENST00000420239 NUP62CLQ9H1M0 184 aa7.19□□□□□ -1.26
CHD2-202ENST00000420239 RASSF4Q9H2L5 321 aa7.19□□□□□ -1.26
CHD2-202ENST00000420239 TMX1Q9H3N1 280 aa7.19□□□□□ -1.26
CHD2-202ENST00000420239 TMEM134Q9H6X4 195 aa7.19□□□□□ -1.26
CHD2-202ENST00000420239 CLIP2Q9UDT6 1046 aa7.19□□□□□ -1.26
CHD2-202ENST00000420239 MYO5BQ9ULV0 1848 aa7.18□□□□□ -1.26
CHD2-202ENST00000420239 TMEM131LA2VDJ0 1609 aa7.18□□□□□ -1.26
CHD2-202ENST00000420239 NPHP1O15259 732 aa7.18□□□□□ -1.26
CHD2-202ENST00000420239 ZRANB2O95218 330 aaKnown RBP eCLIP7.18□□□□□ -1.26
CHD2-202ENST00000420239 DNAJB2P25686 324 aa7.18□□□□□ -1.26
CHD2-202ENST00000420239 CDC25BP30305 580 aa7.18□□□□□ -1.26
CHD2-202ENST00000420239 GYS2P54840 703 aa7.18□□□□□ -1.26
CHD2-202ENST00000420239 ST5P78524 1137 aa7.18□□□□□ -1.26
CHD2-202ENST00000420239 CCZ1BP86790 482 aa7.18□□□□□ -1.26
CHD2-202ENST00000420239 CCZ1P86791 482 aaPredicted RBP7.18□□□□□ -1.26
CHD2-202ENST00000420239 PTPN14Q15678 1187 aa7.18□□□□□ -1.26
CHD2-202ENST00000420239 ERCC6LQ2NKX8 1250 aa7.18□□□□□ -1.26
CHD2-202ENST00000420239 RBM43Q6ZSC3 357 aaKnown RBP7.18□□□□□ -1.26
CHD2-202ENST00000420239 TTC6Q86TZ1 520 aa7.18□□□□□ -1.26
CHD2-202ENST00000420239 CKAP2LQ8IYA6 745 aa7.18□□□□□ -1.26
CHD2-202ENST00000420239 GJD4Q96KN9 370 aaPredicted RBP7.18□□□□□ -1.26
CHD2-202ENST00000420239 KCND1Q9NSA2 647 aa7.18□□□□□ -1.26
CHD2-202ENST00000420239 MON2Q7Z3U7 1717 aa7.18□□□□□ -1.26
CHD2-202ENST00000420239 XRN1Q8IZH2 1706 aaKnown RBP7.18□□□□□ -1.26
CHD2-202ENST00000420239 GPR37L1O60883 481 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 HMOX1P09601 288 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 GJA5P36382 358 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 CCT4P50991 539 aaKnown RBP7.17□□□□□ -1.26
CHD2-202ENST00000420239 AK2P54819 239 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 TSGA10IPQ3SY00 556 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 RNF20Q5VTR2 975 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 KRBA2Q6ZNG9 492 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 UNC5CLQ8IV45 518 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 LRRC8AQ8IWT6 810 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 SMARCE1Q969G3 411 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 UBXN6Q9BZV1 441 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 GEMIN8Q9NWZ8 242 aaKnown RBP7.17□□□□□ -1.26
CHD2-202ENST00000420239 TRMT1Q9NXH9 659 aaKnown RBP7.17□□□□□ -1.26
CHD2-202ENST00000420239 ELP1O95163 1332 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 EDC4Q6P2E9 1401 aaKnown RBP7.17□□□□□ -1.26
CHD2-202ENST00000420239 POGZQ7Z3K3 1410 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 MYO1CO00159 1063 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 POLR3GO15318 223 aaPredicted RBP7.17□□□□□ -1.26
CHD2-202ENST00000420239 HOXB3P14651 431 aaPredicted RBP7.17□□□□□ -1.26
CHD2-202ENST00000420239 ST3GAL1Q11201 340 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 CCAR2Q8N163 923 aaKnown RBP7.17□□□□□ -1.26
CHD2-202ENST00000420239 TXLNBQ8N3L3 684 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 KCNB2Q92953 911 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 SIRT1Q96EB6 747 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 LRRCC1Q9C099 1032 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 L2HGDHQ9H9P8 463 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 CHMP3Q9Y3E7 222 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 TTC21BQ7Z4L5 1316 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 ADGRL3Q9HAR2 1447 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 RGPD1P0DJD0 1748 aa7.17□□□□□ -1.26
CHD2-202ENST00000420239 NUTM2BA6NNL0 878 aaPredicted RBP7.16□□□□□ -1.26
CHD2-202ENST00000420239 NUTM2EB1AL46 878 aaPredicted RBP7.16□□□□□ -1.26
CHD2-202ENST00000420239 GJB2P29033 226 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 CASQ1P31415 396 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 MMP14P50281 582 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 ATP8B2P98198 1209 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 CCDC93Q567U6 631 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 NUTM2DQ5VT03 806 aaPredicted RBP7.16□□□□□ -1.26
CHD2-202ENST00000420239 NUTM2AQ8IVF1 878 aaPredicted RBP7.16□□□□□ -1.26
CHD2-202ENST00000420239 C10orf67Q8IYJ2 551 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 CDK19Q9BWU1 502 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 DNAJC25Q9H1X3 360 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 LIMCH1Q9UPQ0 1083 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 SMC3Q9UQE7 1217 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 SNX14Q9Y5W7 946 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 LRRFIP2Q9Y608 721 aaKnown RBP7.16□□□□□ -1.26
CHD2-202ENST00000420239 TTC21AQ8NDW8 1320 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 CRB1P82279 1406 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 ALKQ9UM73 1620 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 AKAP12Q02952 1782 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 GNAI2P04899 355 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 SKILP12757 684 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 TNNT3P45378 269 aaPredicted RBP7.16□□□□□ -1.26
CHD2-202ENST00000420239 GPR153Q6NV75 609 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 CCDC191Q8NCU4 936 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms