RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 ZFYP08048 801 aaPredicted RBP9.8□□□□□ -0.84
UBR4-206ENST00000419533 CCDC181Q5TID7 509 aa9.8□□□□□ -0.84
UBR4-206ENST00000419533 DZIP3Q86Y13 1208 aaKnown RBP9.8□□□□□ -0.84
UBR4-206ENST00000419533 IBSPP21815 317 aaPredicted RBP9.8□□□□□ -0.84
UBR4-206ENST00000419533 KSR2Q6VAB6 950 aa9.8□□□□□ -0.84
UBR4-206ENST00000419533 NEBLO76041 1014 aa9.8□□□□□ -0.84
UBR4-206ENST00000419533 EIF5P55010 431 aaKnown RBP9.8□□□□□ -0.84
UBR4-206ENST00000419533 SCAND2PQ9GZW5 306 aaPredicted RBP9.8□□□□□ -0.84
UBR4-206ENST00000419533 HMG20BQ9P0W2 317 aa9.8□□□□□ -0.84
UBR4-206ENST00000419533 SLC39A6Q13433 755 aa9.8□□□□□ -0.84
UBR4-206ENST00000419533 MTHFSDQ2M296 383 aaKnown RBP9.8□□□□□ -0.84
UBR4-206ENST00000419533 TMEM67Q5HYA8 995 aa9.8□□□□□ -0.84
UBR4-206ENST00000419533 ZNF397Q8NF99 534 aaPredicted RBP9.8□□□□□ -0.84
UBR4-206ENST00000419533 SNRKQ9NRH2 765 aa9.8□□□□□ -0.84
UBR4-206ENST00000419533 TECPR2O15040 1411 aa9.8□□□□□ -0.84
UBR4-206ENST00000419533 RRP9O43818 475 aaKnown RBP9.8□□□□□ -0.84
UBR4-206ENST00000419533 FGFR1OPO95684 399 aaKnown RBP9.8□□□□□ -0.84
UBR4-206ENST00000419533 NCOA7Q8NI08 942 aa9.8□□□□□ -0.84
UBR4-206ENST00000419533 LRRC7Q96NW7 1537 aa9.79□□□□□ -0.84
UBR4-206ENST00000419533 PTPRUQ92729 1446 aa9.79□□□□□ -0.84
UBR4-206ENST00000419533 ATP2B3Q16720 1220 aa9.79□□□□□ -0.84
UBR4-206ENST00000419533 LIMCH1Q9UPQ0 1083 aa9.79□□□□□ -0.84
UBR4-206ENST00000419533 OVOS2A0A0G2JMS6 1433 aa9.79□□□□□ -0.84
UBR4-206ENST00000419533 OVOS2A0A0J9YW53 1432 aa9.79□□□□□ -0.84
UBR4-206ENST00000419533 OVOS2Q6IE36 1432 aa9.79□□□□□ -0.84
UBR4-206ENST00000419533 IL15P40933 162 aaPredicted RBP9.79□□□□□ -0.84
UBR4-206ENST00000419533 BABAM1Q9NWV8 329 aa9.79□□□□□ -0.84
UBR4-206ENST00000419533 ERBB3P21860 1342 aa9.79□□□□□ -0.84
UBR4-206ENST00000419533 ANXA1P04083 346 aa9.79□□□□□ -0.84
UBR4-206ENST00000419533 NF2P35240 595 aa9.79□□□□□ -0.84
UBR4-206ENST00000419533 SPC24Q8NBT2 197 aa9.79□□□□□ -0.84
UBR4-206ENST00000419533 PATL2C9JE40 543 aaKnown RBP9.78□□□□□ -0.84
UBR4-206ENST00000419533 GRM8O00222 908 aa9.78□□□□□ -0.84
UBR4-206ENST00000419533 MAP3K11Q16584 847 aa9.78□□□□□ -0.84
UBR4-206ENST00000419533 CCDC150Q8NCX0 1101 aa9.78□□□□□ -0.84
UBR4-206ENST00000419533 EYA3Q99504 573 aa9.78□□□□□ -0.84
UBR4-206ENST00000419533 CRB1P82279 1406 aa9.78□□□□□ -0.84
UBR4-206ENST00000419533 CCDC82Q8N4S0 544 aa9.78□□□□□ -0.84
UBR4-206ENST00000419533 KRT23Q9C075 422 aa9.78□□□□□ -0.84
UBR4-206ENST00000419533 TRPM1Q7Z4N2 1603 aa9.78□□□□□ -0.84
UBR4-206ENST00000419533 IARSP41252 1262 aaKnown RBP9.78□□□□□ -0.84
UBR4-206ENST00000419533 SLC52A2Q9HAB3 445 aa9.78□□□□□ -0.84
UBR4-206ENST00000419533 MST1RQ04912 1400 aa9.78□□□□□ -0.84
UBR4-206ENST00000419533 FKBP15Q5T1M5 1219 aa9.78□□□□□ -0.84
UBR4-206ENST00000419533 RHPN1Q8TCX5 695 aa9.78□□□□□ -0.84
UBR4-206ENST00000419533 JDP2Q8WYK2 163 aa9.78□□□□□ -0.84
UBR4-206ENST00000419533 NRXN1Q9ULB1 1477 aa9.78□□□□□ -0.84
UBR4-206ENST00000419533 NEURL4Q96JN8 1562 aa9.78□□□□□ -0.84
UBR4-206ENST00000419533 KAT6BQ8WYB5 2073 aa9.78□□□□□ -0.84
UBR4-206ENST00000419533 MYCNP04198 464 aaPredicted RBP9.77□□□□□ -0.84
UBR4-206ENST00000419533 CYP7A1P22680 504 aa9.77□□□□□ -0.84
UBR4-206ENST00000419533 IL13P35225 146 aa9.77□□□□□ -0.84
UBR4-206ENST00000419533 CETN2P41208 172 aa9.77□□□□□ -0.84
UBR4-206ENST00000419533 PYM1Q9BRP8 204 aaKnown RBP9.77□□□□□ -0.84
UBR4-206ENST00000419533 ANKRD2Q9GZV1 360 aa9.77□□□□□ -0.84
UBR4-206ENST00000419533 CLEC11AQ9Y240 323 aa9.77□□□□□ -0.84
UBR4-206ENST00000419533 IQCEQ6IPM2 695 aa9.77□□□□□ -0.85
UBR4-206ENST00000419533 JARID2Q92833 1246 aaPredicted RBP9.77□□□□□ -0.85
UBR4-206ENST00000419533 SOS1Q07889 1333 aaPredicted RBP9.77□□□□□ -0.85
UBR4-206ENST00000419533 AMPD3Q01432 767 aa9.77□□□□□ -0.85
UBR4-206ENST00000419533 FERMT3Q86UX7 667 aa9.77□□□□□ -0.85
UBR4-206ENST00000419533 CALML4Q96GE6 196 aa9.77□□□□□ -0.85
UBR4-206ENST00000419533 TSPY3P0CV98 308 aa9.77□□□□□ -0.85
UBR4-206ENST00000419533 TSPY8P0CW00 308 aa9.77□□□□□ -0.85
UBR4-206ENST00000419533 ZC3H12CQ9C0D7 883 aaKnown RBP9.77□□□□□ -0.85
UBR4-206ENST00000419533 UBA5Q9GZZ9 404 aa9.77□□□□□ -0.85
UBR4-206ENST00000419533 CNNM2Q9H8M5 875 aa9.77□□□□□ -0.85
UBR4-206ENST00000419533 TCP11L1Q9NUJ3 509 aa9.77□□□□□ -0.85
UBR4-206ENST00000419533 UBR1Q8IWV7 1749 aa9.77□□□□□ -0.85
UBR4-206ENST00000419533 MROH1Q8NDA8 1641 aa9.77□□□□□ -0.85
UBR4-206ENST00000419533 PNPLA6Q8IY17 1366 aa9.77□□□□□ -0.85
UBR4-206ENST00000419533 PHKG2P15735 406 aa9.77□□□□□ -0.85
UBR4-206ENST00000419533 JAKMIP3Q5VZ66 844 aa9.77□□□□□ -0.85
UBR4-206ENST00000419533 NAA16Q6N069 864 aaPredicted RBP9.77□□□□□ -0.85
UBR4-206ENST00000419533 LMBR1LQ6UX01 489 aa9.77□□□□□ -0.85
UBR4-206ENST00000419533 STXBP4Q6ZWJ1 553 aa9.77□□□□□ -0.85
UBR4-206ENST00000419533 NEK1Q96PY6 1258 aa9.77□□□□□ -0.85
UBR4-206ENST00000419533 USP16Q9Y5T5 823 aa9.77□□□□□ -0.85
UBR4-206ENST00000419533 PLCG2P16885 1265 aa9.76□□□□□ -0.85
UBR4-206ENST00000419533 METAP2P50579 478 aaKnown RBP eCLIP9.76□□□□□ -0.852e-6■■□□□ 13.7
UBR4-206ENST00000419533 TMTC2Q8N394 836 aa9.76□□□□□ -0.85
UBR4-206ENST00000419533 TMEM87AQ8NBN3 555 aa9.76□□□□□ -0.85
UBR4-206ENST00000419533 C20orf194Q5TEA3 1177 aa9.76□□□□□ -0.85
UBR4-206ENST00000419533 TAF4BQ92750 862 aa9.76□□□□□ -0.85
UBR4-206ENST00000419533 VAT1LQ9HCJ6 419 aa9.76□□□□□ -0.85
UBR4-206ENST00000419533 EPB41L2O43491 1005 aaKnown RBP9.76□□□□□ -0.85
UBR4-206ENST00000419533 GPR162Q16538 588 aa9.76□□□□□ -0.85
UBR4-206ENST00000419533 ILDR1Q86SU0 546 aaPredicted RBP9.76□□□□□ -0.85
UBR4-206ENST00000419533 RBM17Q96I25 401 aaKnown RBP9.76□□□□□ -0.85
UBR4-206ENST00000419533 MCM5P33992 734 aa9.76□□□□□ -0.85
UBR4-206ENST00000419533 BARGINQ6ZT62 677 aa9.76□□□□□ -0.85
UBR4-206ENST00000419533 LINS1Q8NG48 757 aa9.76□□□□□ -0.85
UBR4-206ENST00000419533 ESR2Q92731 530 aa9.76□□□□□ -0.85
UBR4-206ENST00000419533 LRRC27Q9C0I9 530 aa9.76□□□□□ -0.85
UBR4-206ENST00000419533 ANO10Q9NW15 660 aa9.76□□□□□ -0.85
UBR4-206ENST00000419533 SLC4A4Q9Y6R1 1079 aa9.76□□□□□ -0.85
UBR4-206ENST00000419533 BMP2KLQ5H9B9 411 aa9.75□□□□□ -0.85
UBR4-206ENST00000419533 VPS36Q86VN1 386 aa9.75□□□□□ -0.85
UBR4-206ENST00000419533 NLGN1Q8N2Q7 840 aa9.75□□□□□ -0.85
UBR4-206ENST00000419533 GOLGA6L10A6NI86 522 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms