RNA–Protein interactions for RNA: ENST00000418217.1

GTF2B-202, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-202ENST00000418217 MVPQ14764 893 aaKnown RBP8.15□□□□□ -1.1
GTF2B-202ENST00000418217 NEUROD2Q15784 382 aa8.15□□□□□ -1.1
GTF2B-202ENST00000418217 ALDH1L2Q3SY69 923 aa8.15□□□□□ -1.1
GTF2B-202ENST00000418217 GAS2L2Q8NHY3 880 aa8.15□□□□□ -1.1
GTF2B-202ENST00000418217 PDGFDQ9GZP0 370 aaPredicted RBP8.15□□□□□ -1.1
GTF2B-202ENST00000418217 BCL9O00512 1426 aa8.14□□□□□ -1.11
GTF2B-202ENST00000418217 DDX11L8A8MPP1 907 aa8.14□□□□□ -1.11
GTF2B-202ENST00000418217 BMP1P13497 986 aa8.14□□□□□ -1.11
GTF2B-202ENST00000418217 PHKG2P15735 406 aa8.14□□□□□ -1.11
GTF2B-202ENST00000418217 RC3H1Q5TC82 1133 aaKnown RBP8.14□□□□□ -1.11
GTF2B-202ENST00000418217 ZNF530Q6P9A1 599 aaPredicted RBP8.14□□□□□ -1.11
GTF2B-202ENST00000418217 TRIM46Q7Z4K8 759 aa8.14□□□□□ -1.11
GTF2B-202ENST00000418217 SKAP1Q86WV1 359 aa8.14□□□□□ -1.11
GTF2B-202ENST00000418217 DAXXQ9UER7 740 aaPredicted RBP8.14□□□□□ -1.11
GTF2B-202ENST00000418217 CYP27B1O15528 508 aa8.13□□□□□ -1.11
GTF2B-202ENST00000418217 GCGRP47871 477 aa8.13□□□□□ -1.11
GTF2B-202ENST00000418217 MMP16P51512 607 aa8.13□□□□□ -1.11
GTF2B-202ENST00000418217 CALD1Q05682 793 aaKnown RBP8.13□□□□□ -1.11
GTF2B-202ENST00000418217 EXOSC9Q06265 439 aaKnown RBP8.13□□□□□ -1.11
GTF2B-202ENST00000418217 NFE2L2Q16236 605 aa8.13□□□□□ -1.11
GTF2B-202ENST00000418217 AKAP4Q5JQC9 854 aa8.13□□□□□ -1.11
GTF2B-202ENST00000418217 DZIP1LQ8IYY4 767 aaKnown RBP8.13□□□□□ -1.11
GTF2B-202ENST00000418217 KCTD17Q8N5Z5 321 aa8.13□□□□□ -1.11
GTF2B-202ENST00000418217 FRAT1Q92837 279 aaPredicted RBP8.13□□□□□ -1.11
GTF2B-202ENST00000418217 SYTL4Q96C24 671 aaPredicted RBP8.13□□□□□ -1.11
GTF2B-202ENST00000418217 DCAF5Q96JK2 942 aa8.13□□□□□ -1.11
GTF2B-202ENST00000418217 SHANK3Q9BYB0 1731 aa8.12□□□□□ -1.11
GTF2B-202ENST00000418217 ALDH1A1P00352 501 aa8.12□□□□□ -1.11
GTF2B-202ENST00000418217 RIPK4P57078 832 aa8.12□□□□□ -1.11
GTF2B-202ENST00000418217 SKOR1P84550 965 aa8.12□□□□□ -1.11
GTF2B-202ENST00000418217 HDAC1Q13547 482 aaPredicted RBP8.12□□□□□ -1.11
GTF2B-202ENST00000418217 MTHFSDQ2M296 383 aaKnown RBP8.12□□□□□ -1.11
GTF2B-202ENST00000418217 ATF7IPQ6VMQ6 1270 aa8.12□□□□□ -1.11
GTF2B-202ENST00000418217 NPM2Q86SE8 214 aaKnown RBP8.12□□□□□ -1.11
GTF2B-202ENST00000418217 RTF1Q92541 710 aaKnown RBP8.12□□□□□ -1.11
GTF2B-202ENST00000418217 ARHGEF1Q92888 912 aaKnown RBP8.12□□□□□ -1.11
GTF2B-202ENST00000418217 ACSBG1Q96GR2 724 aa8.12□□□□□ -1.11
GTF2B-202ENST00000418217 RWDD1Q9H446 243 aaPredicted RBP8.12□□□□□ -1.11
GTF2B-202ENST00000418217 SMC4Q9NTJ3 1288 aa8.12□□□□□ -1.11
GTF2B-202ENST00000418217 DDX19BQ9UMR2 479 aa8.12□□□□□ -1.11
GTF2B-202ENST00000418217 PCDHB15Q9Y5E8 787 aa8.12□□□□□ -1.11
GTF2B-202ENST00000418217 PARP4Q9UKK3 1724 aaKnown RBP8.12□□□□□ -1.11
GTF2B-202ENST00000418217 GNAT3A8MTJ3 354 aa8.11□□□□□ -1.11
GTF2B-202ENST00000418217 ZNF853P0CG23 659 aa8.11□□□□□ -1.11
GTF2B-202ENST00000418217 TRIM27P14373 513 aa8.11□□□□□ -1.11
GTF2B-202ENST00000418217 RGS3P49796 1198 aa8.11□□□□□ -1.11
GTF2B-202ENST00000418217 MLLT1Q03111 559 aaPredicted RBP8.11□□□□□ -1.11
GTF2B-202ENST00000418217 LMOD3Q0VAK6 560 aa8.11□□□□□ -1.11
GTF2B-202ENST00000418217 KCNMA1Q12791 1236 aa8.11□□□□□ -1.11
GTF2B-202ENST00000418217 TXNRD1Q16881 649 aa8.11□□□□□ -1.11
GTF2B-202ENST00000418217 SSH1Q8WYL5 1049 aa8.11□□□□□ -1.11
GTF2B-202ENST00000418217 TSR2Q969E8 191 aaKnown RBP8.11□□□□□ -1.11
GTF2B-202ENST00000418217 IFT57Q9NWB7 429 aa8.11□□□□□ -1.11
GTF2B-202ENST00000418217 TNNQ9UQP3 1299 aa8.11□□□□□ -1.11
GTF2B-202ENST00000418217 CACNA1FO60840 1977 aa8.1□□□□□ -1.11
GTF2B-202ENST00000418217 ERVV-2B6SEH9 535 aa8.1□□□□□ -1.11
GTF2B-202ENST00000418217 IPO8O15397 1037 aaKnown RBP8.1□□□□□ -1.11
GTF2B-202ENST00000418217 HTATSF1O43719 755 aaKnown RBP8.1□□□□□ -1.11
GTF2B-202ENST00000418217 CABP4P57796 275 aa8.1□□□□□ -1.11
GTF2B-202ENST00000418217 FTSJ3Q8IY81 847 aaKnown RBP8.1□□□□□ -1.11
GTF2B-202ENST00000418217 ARHGAP45Q92619 1136 aa8.1□□□□□ -1.11
GTF2B-202ENST00000418217 PHACTR3Q96KR7 559 aa8.1□□□□□ -1.11
GTF2B-202ENST00000418217 BCL2L13Q9BXK5 485 aa8.1□□□□□ -1.11
GTF2B-202ENST00000418217 TMOD3Q9NYL9 352 aa8.1□□□□□ -1.11
GTF2B-202ENST00000418217 UTRNP46939 3433 aa8.1□□□□□ -1.11
GTF2B-202ENST00000418217 CAPN5O15484 640 aaPredicted RBP8.09□□□□□ -1.11
GTF2B-202ENST00000418217 HSPA1AP0DMV8 641 aaKnown RBP8.09□□□□□ -1.11
GTF2B-202ENST00000418217 HSPA1BP0DMV9 641 aaKnown RBP8.09□□□□□ -1.11
GTF2B-202ENST00000418217 HMGB2P26583 209 aaKnown RBP8.09□□□□□ -1.11
GTF2B-202ENST00000418217 GSK3AP49840 483 aa8.09□□□□□ -1.11
GTF2B-202ENST00000418217 WNT7BP56706 349 aa8.09□□□□□ -1.11
GTF2B-202ENST00000418217 GNAI1P63096 354 aa8.09□□□□□ -1.11
GTF2B-202ENST00000418217 RTL5Q5HYW3 569 aaPredicted RBP8.09□□□□□ -1.11
GTF2B-202ENST00000418217 MPRIPQ6WCQ1 1025 aa8.09□□□□□ -1.11
GTF2B-202ENST00000418217 SMC5Q8IY18 1101 aa8.09□□□□□ -1.11
GTF2B-202ENST00000418217 CASZ1Q86V15 1759 aa8.09□□□□□ -1.11
GTF2B-202ENST00000418217 RGPD5Q99666 1765 aa8.09□□□□□ -1.11
GTF2B-202ENST00000418217 ABCC4O15439 1325 aa8.08□□□□□ -1.12
GTF2B-202ENST00000418217 RNMTO43148 476 aaKnown RBP8.08□□□□□ -1.12
GTF2B-202ENST00000418217 YBX3P16989 372 aaKnown RBP eCLIP8.08□□□□□ -1.12
GTF2B-202ENST00000418217 TEFQ10587 303 aa8.08□□□□□ -1.12
GTF2B-202ENST00000418217 FSTL1Q12841 308 aa8.08□□□□□ -1.12
GTF2B-202ENST00000418217 CCDC24Q8N4L8 307 aa8.08□□□□□ -1.12
GTF2B-202ENST00000418217 SMARCC1Q92922 1105 aaPredicted RBP8.08□□□□□ -1.12
GTF2B-202ENST00000418217 CHMP4BQ9H444 224 aaKnown RBP8.08□□□□□ -1.12
GTF2B-202ENST00000418217 ZBTB40Q9NUA8 1239 aa8.08□□□□□ -1.12
GTF2B-202ENST00000418217 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.08□□□□□ -1.12
GTF2B-202ENST00000418217 GRIPAP1Q4V328 841 aa8.07□□□□□ -1.12
GTF2B-202ENST00000418217 PIGBQ92521 554 aa8.07□□□□□ -1.12
GTF2B-202ENST00000418217 SLC52A2Q9HAB3 445 aa8.07□□□□□ -1.12
GTF2B-202ENST00000418217 NOB1Q9ULX3 412 aaKnown RBP8.07□□□□□ -1.12
GTF2B-202ENST00000418217 TUBGCP6Q96RT7 1819 aa8.06□□□□□ -1.12
GTF2B-202ENST00000418217 WNK3Q9BYP7 1800 aa8.06□□□□□ -1.12
GTF2B-202ENST00000418217 KDM6AO15550 1401 aaPredicted RBP8.06□□□□□ -1.12
GTF2B-202ENST00000418217 VAMP4O75379 141 aa8.06□□□□□ -1.12
GTF2B-202ENST00000418217 DXOO77932 396 aaKnown RBP8.06□□□□□ -1.12
GTF2B-202ENST00000418217 DEKP35659 375 aaKnown RBP8.06□□□□□ -1.12
GTF2B-202ENST00000418217 Q3C1V9 767 aa8.06□□□□□ -1.12
GTF2B-202ENST00000418217 SLC27A3Q5K4L6 730 aa8.06□□□□□ -1.12
GTF2B-202ENST00000418217 TTC5Q8N0Z6 440 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms