RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 MSL1Q68DK7 614 aa6.62□□□□□ -1.35
HMGB3P20-201ENST00000417997 TTC16Q8NEE8 873 aa6.62□□□□□ -1.35
HMGB3P20-201ENST00000417997 HELQQ8TDG4 1101 aa6.62□□□□□ -1.35
HMGB3P20-201ENST00000417997 ADAM23O75077 832 aa6.61□□□□□ -1.35
HMGB3P20-201ENST00000417997 PCSK2P16519 638 aa6.61□□□□□ -1.35
HMGB3P20-201ENST00000417997 SSFA2P28290 1259 aa6.61□□□□□ -1.35
HMGB3P20-201ENST00000417997 DNM1Q05193 864 aaKnown RBP6.61□□□□□ -1.35
HMGB3P20-201ENST00000417997 MTMR3Q13615 1198 aa6.61□□□□□ -1.35
HMGB3P20-201ENST00000417997 SHISA2Q6UWI4 295 aa6.61□□□□□ -1.35
HMGB3P20-201ENST00000417997 NUDT16Q96DE0 195 aaKnown RBP6.61□□□□□ -1.35
HMGB3P20-201ENST00000417997 USP21Q9UK80 565 aa6.61□□□□□ -1.35
HMGB3P20-201ENST00000417997 C9orf172C9J069 976 aa6.6□□□□□ -1.35
HMGB3P20-201ENST00000417997 ABL1P00519 1130 aa6.6□□□□□ -1.35
HMGB3P20-201ENST00000417997 MPSTP25325 297 aa6.6□□□□□ -1.35
HMGB3P20-201ENST00000417997 SOX18P35713 384 aa6.6□□□□□ -1.35
HMGB3P20-201ENST00000417997 HYAL2Q12891 473 aa6.6□□□□□ -1.35
HMGB3P20-201ENST00000417997 GRIK5Q16478 980 aa6.6□□□□□ -1.35
HMGB3P20-201ENST00000417997 NOM1Q5C9Z4 860 aaKnown RBP6.6□□□□□ -1.35
HMGB3P20-201ENST00000417997 ZNF438Q7Z4V0 828 aa6.6□□□□□ -1.35
HMGB3P20-201ENST00000417997 FMR1NBQ8N0W7 255 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P20-201ENST00000417997 OR13H1Q8NG92 308 aa6.6□□□□□ -1.35
HMGB3P20-201ENST00000417997 EDEM1Q92611 657 aa6.6□□□□□ -1.35
HMGB3P20-201ENST00000417997 SPACA7Q96KW9 195 aa6.6□□□□□ -1.35
HMGB3P20-201ENST00000417997 MTMR7Q9Y216 660 aa6.6□□□□□ -1.35
HMGB3P20-201ENST00000417997 SELPP16109 830 aa6.59□□□□□ -1.35
HMGB3P20-201ENST00000417997 C8orf34Q49A92 452 aa6.59□□□□□ -1.35
HMGB3P20-201ENST00000417997 ERICH6Q7L0X2 663 aa6.59□□□□□ -1.35
HMGB3P20-201ENST00000417997 IL22RA1Q8N6P7 574 aa6.59□□□□□ -1.35
HMGB3P20-201ENST00000417997 TTC9Q92623 222 aa6.59□□□□□ -1.35
HMGB3P20-201ENST00000417997 ABI2Q9NYB9 513 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P20-201ENST00000417997 EIF1AXP47813 144 aaKnown RBP6.58□□□□□ -1.36
HMGB3P20-201ENST00000417997 COL13A1Q5TAT6 717 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P20-201ENST00000417997 ELP3Q9H9T3 547 aa6.58□□□□□ -1.36
HMGB3P20-201ENST00000417997 ANO2Q9NQ90 1003 aa6.58□□□□□ -1.36
HMGB3P20-201ENST00000417997 TRIM33Q9UPN9 1127 aa6.58□□□□□ -1.36
HMGB3P20-201ENST00000417997 CYP2E1P05181 493 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P20-201ENST00000417997 RPLP1P05386 114 aaKnown RBP6.57□□□□□ -1.36
HMGB3P20-201ENST00000417997 HOXD8P13378 290 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P20-201ENST00000417997 ATP11AP98196 1134 aa6.57□□□□□ -1.36
HMGB3P20-201ENST00000417997 NRG1Q02297 640 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P20-201ENST00000417997 MBTPS1Q14703 1052 aa6.57□□□□□ -1.36
HMGB3P20-201ENST00000417997 CEP135Q66GS9 1140 aa6.57□□□□□ -1.36
HMGB3P20-201ENST00000417997 PDE12Q6L8Q7 609 aaKnown RBP6.57□□□□□ -1.36
HMGB3P20-201ENST00000417997 NCAPG2Q86XI2 1143 aa6.57□□□□□ -1.36
HMGB3P20-201ENST00000417997 FBXO11Q86XK2 927 aa6.57□□□□□ -1.36
HMGB3P20-201ENST00000417997 DTWD1Q8N5C7 304 aa6.57□□□□□ -1.36
HMGB3P20-201ENST00000417997 LENG1Q96BZ8 264 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P20-201ENST00000417997 LACRTQ9GZZ8 138 aa6.57□□□□□ -1.36
HMGB3P20-201ENST00000417997 SEMA6BQ9H3T3 888 aa6.57□□□□□ -1.36
HMGB3P20-201ENST00000417997 TPSG1Q9NRR2 321 aa6.57□□□□□ -1.36
HMGB3P20-201ENST00000417997 TMEM63CQ9P1W3 806 aa6.57□□□□□ -1.36
HMGB3P20-201ENST00000417997 KANSL3Q9P2N6 904 aa6.57□□□□□ -1.36
HMGB3P20-201ENST00000417997 A6NHS1 94 aa6.56□□□□□ -1.36
HMGB3P20-201ENST00000417997 PDGFAP04085 211 aa6.56□□□□□ -1.36
HMGB3P20-201ENST00000417997 CDC25BP30305 580 aa6.56□□□□□ -1.36
HMGB3P20-201ENST00000417997 ZNF211Q13398 564 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P20-201ENST00000417997 ALKBH2Q6NS38 261 aa6.56□□□□□ -1.36
HMGB3P20-201ENST00000417997 DEAF1O75398 565 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P20-201ENST00000417997 SMNDC1O75940 238 aaKnown RBP eCLIP6.55□□□□□ -1.36
HMGB3P20-201ENST00000417997 MZF1P28698 734 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P20-201ENST00000417997 ADGRE1Q14246 886 aa6.55□□□□□ -1.36
HMGB3P20-201ENST00000417997 PHLDB3Q6NSJ2 640 aa6.55□□□□□ -1.36
HMGB3P20-201ENST00000417997 TXNRD3Q86VQ6 643 aa6.55□□□□□ -1.36
HMGB3P20-201ENST00000417997 RASSF4Q9H2L5 321 aa6.55□□□□□ -1.36
HMGB3P20-201ENST00000417997 GGNBP2Q9H3C7 697 aa6.55□□□□□ -1.36
HMGB3P20-201ENST00000417997 POLIQ9UNA4 740 aa6.55□□□□□ -1.36
HMGB3P20-201ENST00000417997 BICRAQ9NZM4 1560 aa6.55□□□□□ -1.36
HMGB3P20-201ENST00000417997 FAM177BA6PVY3 158 aa6.54□□□□□ -1.36
HMGB3P20-201ENST00000417997 FAM13AO94988 1023 aa6.54□□□□□ -1.36
HMGB3P20-201ENST00000417997 CES1P23141 567 aa6.54□□□□□ -1.36
HMGB3P20-201ENST00000417997 B4GALNT3Q6L9W6 998 aa6.54□□□□□ -1.36
HMGB3P20-201ENST00000417997 CNTN3Q9P232 1028 aa6.54□□□□□ -1.36
HMGB3P20-201ENST00000417997 USTQ9Y2C2 406 aa6.54□□□□□ -1.36
HMGB3P20-201ENST00000417997 FKBP4Q02790 459 aaKnown RBP eCLIP6.53□□□□□ -1.36
HMGB3P20-201ENST00000417997 SF3B2Q13435 895 aaKnown RBP6.53□□□□□ -1.36
HMGB3P20-201ENST00000417997 TXNDC11Q6PKC3 985 aa6.53□□□□□ -1.36
HMGB3P20-201ENST00000417997 IGF2-ASQ6U949 168 aa6.53□□□□□ -1.36
HMGB3P20-201ENST00000417997 C1orf127Q8N9H9 656 aa6.53□□□□□ -1.36
HMGB3P20-201ENST00000417997 PPME1Q9Y570 386 aa6.53□□□□□ -1.36
HMGB3P20-201ENST00000417997 LINC01387J3KSC0 135 aa6.52□□□□□ -1.37
HMGB3P20-201ENST00000417997 CDC27P30260 824 aa6.52□□□□□ -1.37
HMGB3P20-201ENST00000417997 IREB2P48200 963 aaKnown RBP6.52□□□□□ -1.37
HMGB3P20-201ENST00000417997 RSPO4Q2I0M5 234 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P20-201ENST00000417997 ILDR2Q71H61 639 aa6.52□□□□□ -1.37
HMGB3P20-201ENST00000417997 WFDC12Q8WWY7 111 aa6.52□□□□□ -1.37
HMGB3P20-201ENST00000417997 TP53INP1Q96A56 240 aa6.52□□□□□ -1.37
HMGB3P20-201ENST00000417997 PBX4Q9BYU1 374 aa6.52□□□□□ -1.37
HMGB3P20-201ENST00000417997 TIMELESSQ9UNS1 1208 aa6.52□□□□□ -1.37
HMGB3P20-201ENST00000417997 DLL1O00548 723 aa6.51□□□□□ -1.37
HMGB3P20-201ENST00000417997 PTPRAP18433 802 aa6.51□□□□□ -1.37
HMGB3P20-201ENST00000417997 SETDB1Q15047 1291 aa6.51□□□□□ -1.37
HMGB3P20-201ENST00000417997 CACTIN-AS1Q8N1I8 211 aa6.51□□□□□ -1.37
HMGB3P20-201ENST00000417997 MUC3BQ9H195 1237 aa6.51□□□□□ -1.37
HMGB3P20-201ENST00000417997 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P20-201ENST00000417997 BAZ1AQ9NRL2 1556 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P20-201ENST00000417997 H3BRB1 525 aa6.5□□□□□ -1.37
HMGB3P20-201ENST00000417997 DYRK3O43781 588 aa6.5□□□□□ -1.37
HMGB3P20-201ENST00000417997 PHACTR2O75167 634 aa6.5□□□□□ -1.37
HMGB3P20-201ENST00000417997 KIF4AO95239 1232 aa6.5□□□□□ -1.37
HMGB3P20-201ENST00000417997 ACPPP15309 386 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms