RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 TREHO43280 583 aa8.67□□□□□ -1.02
NIFKP3-201ENST00000417799 SNRPBP14678 240 aaKnown RBP8.67□□□□□ -1.02
NIFKP3-201ENST00000417799 EPB42P16452 691 aa8.67□□□□□ -1.02
NIFKP3-201ENST00000417799 RBM25P49756 843 aaKnown RBP8.67□□□□□ -1.02
NIFKP3-201ENST00000417799 COL19A1Q14993 1142 aa8.67□□□□□ -1.02
NIFKP3-201ENST00000417799 C8orf34Q49A92 452 aa8.67□□□□□ -1.02
NIFKP3-201ENST00000417799 FIGNL1Q6PIW4 674 aa8.67□□□□□ -1.02
NIFKP3-201ENST00000417799 TEX14Q8IWB6 1497 aa8.67□□□□□ -1.02
NIFKP3-201ENST00000417799 CMTR1Q8N1G2 835 aaKnown RBP8.67□□□□□ -1.02
NIFKP3-201ENST00000417799 ZCCHC2Q9C0B9 1178 aaKnown RBP8.67□□□□□ -1.02
NIFKP3-201ENST00000417799 NUCKS1Q9H1E3 243 aaKnown RBP8.67□□□□□ -1.02
NIFKP3-201ENST00000417799 USP20Q9Y2K6 914 aa8.67□□□□□ -1.02
NIFKP3-201ENST00000417799 ARHGEF12Q9NZN5 1544 aa8.66□□□□□ -1.02
NIFKP3-201ENST00000417799 ADGRL1O94910 1474 aa8.66□□□□□ -1.02
NIFKP3-201ENST00000417799 DAPK1P53355 1430 aa8.66□□□□□ -1.02
NIFKP3-201ENST00000417799 PTPRKQ15262 1439 aa8.66□□□□□ -1.02
NIFKP3-201ENST00000417799 SCAPERQ9BY12 1400 aa8.66□□□□□ -1.02
NIFKP3-201ENST00000417799 RBM47A0AV96 593 aaKnown RBP8.66□□□□□ -1.02
NIFKP3-201ENST00000417799 GPR182O15218 404 aa8.66□□□□□ -1.02
NIFKP3-201ENST00000417799 IGHA2P01877 340 aa8.66□□□□□ -1.02
NIFKP3-201ENST00000417799 TSPY4P0CV99 314 aa8.66□□□□□ -1.02
NIFKP3-201ENST00000417799 TSPY10P0CW01 314 aa8.66□□□□□ -1.02
NIFKP3-201ENST00000417799 PLCB3Q01970 1234 aa8.66□□□□□ -1.02
NIFKP3-201ENST00000417799 EHHADHQ08426 723 aa8.66□□□□□ -1.02
NIFKP3-201ENST00000417799 ZNF428Q96B54 188 aa8.66□□□□□ -1.02
NIFKP3-201ENST00000417799 GGNBP2Q9H3C7 697 aa8.66□□□□□ -1.02
NIFKP3-201ENST00000417799 BRD7Q9NPI1 651 aa8.66□□□□□ -1.02
NIFKP3-201ENST00000417799 ARHGEF5Q12774 1597 aa8.65□□□□□ -1.02
NIFKP3-201ENST00000417799 CFAP74Q9C0B2 1584 aa8.65□□□□□ -1.02
NIFKP3-201ENST00000417799 ABCC1P33527 1531 aa8.65□□□□□ -1.02
NIFKP3-201ENST00000417799 SYCP2Q9BX26 1530 aa8.65□□□□□ -1.02
NIFKP3-201ENST00000417799 C11orf95C9JLR9 678 aaPredicted RBP8.65□□□□□ -1.02
NIFKP3-201ENST00000417799 ATXN7O15265 892 aaPredicted RBP8.65□□□□□ -1.02
NIFKP3-201ENST00000417799 THBS1P07996 1170 aa8.65□□□□□ -1.02
NIFKP3-201ENST00000417799 DSC3Q14574 896 aa8.65□□□□□ -1.02
NIFKP3-201ENST00000417799 DBN1Q16643 649 aa8.65□□□□□ -1.02
NIFKP3-201ENST00000417799 TRIM22Q8IYM9 498 aa8.65□□□□□ -1.02
NIFKP3-201ENST00000417799 AFAP1Q8N556 730 aa8.65□□□□□ -1.02
NIFKP3-201ENST00000417799 NIF3L1Q9GZT8 377 aa8.65□□□□□ -1.02
NIFKP3-201ENST00000417799 CUEDC1Q9NWM3 386 aaPredicted RBP8.65□□□□□ -1.02
NIFKP3-201ENST00000417799 FNDC3AQ9Y2H6 1198 aaKnown RBP8.65□□□□□ -1.02
NIFKP3-201ENST00000417799 PCDHGC4Q9Y5F7 938 aa8.65□□□□□ -1.02
NIFKP3-201ENST00000417799 CCDC141Q6ZP82 1450 aa8.64□□□□□ -1.03
NIFKP3-201ENST00000417799 TRAPPC8Q9Y2L5 1435 aa8.64□□□□□ -1.03
NIFKP3-201ENST00000417799 A6NHS1 94 aa8.64□□□□□ -1.03
NIFKP3-201ENST00000417799 EAPPQ56P03 285 aaPredicted RBP8.64□□□□□ -1.03
NIFKP3-201ENST00000417799 GIPC2Q8TF65 315 aa8.64□□□□□ -1.03
NIFKP3-201ENST00000417799 ALKBH8Q96BT7 664 aaKnown RBP8.64□□□□□ -1.03
NIFKP3-201ENST00000417799 KCNMB2Q9Y691 235 aa8.64□□□□□ -1.03
NIFKP3-201ENST00000417799 PPRC1Q5VV67 1664 aaKnown RBP8.64□□□□□ -1.03
NIFKP3-201ENST00000417799 DNMT1P26358 1616 aaKnown RBP8.64□□□□□ -1.03
NIFKP3-201ENST00000417799 TSPOAP1O95153 1857 aa8.64□□□□□ -1.03
NIFKP3-201ENST00000417799 UBAP1LF5GYI3 381 aa8.63□□□□□ -1.03
NIFKP3-201ENST00000417799 KHNYNO15037 678 aaKnown RBP8.63□□□□□ -1.03
NIFKP3-201ENST00000417799 P4HBP07237 508 aaKnown RBP8.63□□□□□ -1.03
NIFKP3-201ENST00000417799 FAM157BP0CG42 384 aa8.63□□□□□ -1.03
NIFKP3-201ENST00000417799 ITGA6P23229 1130 aa8.63□□□□□ -1.03
NIFKP3-201ENST00000417799 GRNP28799 593 aaKnown RBP8.63□□□□□ -1.03
NIFKP3-201ENST00000417799 FMR1Q06787 632 aaKnown RBP eCLIP8.63□□□□□ -1.03
NIFKP3-201ENST00000417799 FBXO33Q7Z6M2 555 aa8.63□□□□□ -1.03
NIFKP3-201ENST00000417799 GMCL1Q96IK5 515 aa8.63□□□□□ -1.03
NIFKP3-201ENST00000417799 DENND4BO75064 1496 aaPredicted RBP8.63□□□□□ -1.03
NIFKP3-201ENST00000417799 SHANK2Q9UPX8 1470 aa8.63□□□□□ -1.03
NIFKP3-201ENST00000417799 ROCK1Q13464 1354 aa8.62□□□□□ -1.03
NIFKP3-201ENST00000417799 SPAG9O60271 1321 aaKnown RBP8.62□□□□□ -1.03
NIFKP3-201ENST00000417799 DCDC2BA2VCK2 349 aa8.62□□□□□ -1.03
NIFKP3-201ENST00000417799 RAPGEF3O95398 923 aa8.62□□□□□ -1.03
NIFKP3-201ENST00000417799 ZNF16P17020 682 aaPredicted RBP8.62□□□□□ -1.03
NIFKP3-201ENST00000417799 MAPK8P45983 427 aa8.62□□□□□ -1.03
NIFKP3-201ENST00000417799 UBAP2LQ14157 1087 aaKnown RBP8.62□□□□□ -1.03
NIFKP3-201ENST00000417799 TRIP4Q15650 581 aaPredicted RBP8.62□□□□□ -1.03
NIFKP3-201ENST00000417799 ZNF326Q5BKZ1 582 aaKnown RBP8.62□□□□□ -1.03
NIFKP3-201ENST00000417799 RRP7BPQ9NSQ0 103 aa8.62□□□□□ -1.03
NIFKP3-201ENST00000417799 KCNH4Q9UQ05 1017 aa8.62□□□□□ -1.03
NIFKP3-201ENST00000417799 C9orf84Q5VXU9 1444 aa8.62□□□□□ -1.03
NIFKP3-201ENST00000417799 POGZQ7Z3K3 1410 aa8.62□□□□□ -1.03
NIFKP3-201ENST00000417799 EFSO43281 561 aa8.61□□□□□ -1.03
NIFKP3-201ENST00000417799 XYLBO75191 536 aa8.61□□□□□ -1.03
NIFKP3-201ENST00000417799 KCNQ4P56696 695 aa8.61□□□□□ -1.03
NIFKP3-201ENST00000417799 TNP2Q05952 138 aa8.61□□□□□ -1.03
NIFKP3-201ENST00000417799 SFSWAPQ12872 951 aaKnown RBP8.61□□□□□ -1.03
NIFKP3-201ENST00000417799 XKR5Q6UX68 686 aa8.61□□□□□ -1.03
NIFKP3-201ENST00000417799 ZNF837Q96EG3 531 aaPredicted RBP8.61□□□□□ -1.03
NIFKP3-201ENST00000417799 C11orf16Q9NQ32 467 aa8.61□□□□□ -1.03
NIFKP3-201ENST00000417799 ZNF518AQ6AHZ1 1483 aa8.61□□□□□ -1.03
NIFKP3-201ENST00000417799 RTEL1-TNFRSF6BF6WH68 1400 aa8.61□□□□□ -1.03
NIFKP3-201ENST00000417799 NCOA1Q15788 1441 aa8.61□□□□□ -1.03
NIFKP3-201ENST00000417799 ANKRD30AQ9BXX3 1397 aa8.61□□□□□ -1.03
NIFKP3-201ENST00000417799 ADGRL2O95490 1459 aa8.6□□□□□ -1.03
NIFKP3-201ENST00000417799 BNIP3LO60238 219 aa8.6□□□□□ -1.03
NIFKP3-201ENST00000417799 PPFIA3O75145 1194 aa8.6□□□□□ -1.03
NIFKP3-201ENST00000417799 EGFRP00533 1210 aa8.6□□□□□ -1.03
NIFKP3-201ENST00000417799 NEFLP07196 543 aa8.6□□□□□ -1.03
NIFKP3-201ENST00000417799 MAPTP10636 758 aaKnown RBP8.6□□□□□ -1.03
NIFKP3-201ENST00000417799 TAGLNQ01995 201 aaKnown RBP8.6□□□□□ -1.03
NIFKP3-201ENST00000417799 LAMC2Q13753 1193 aa8.6□□□□□ -1.03
NIFKP3-201ENST00000417799 PDE12Q6L8Q7 609 aaKnown RBP8.6□□□□□ -1.03
NIFKP3-201ENST00000417799 ZNF438Q7Z4V0 828 aa8.6□□□□□ -1.03
NIFKP3-201ENST00000417799 COL17A1Q9UMD9 1497 aaPredicted RBP8.59□□□□□ -1.03
NIFKP3-201ENST00000417799 GTPBP3Q969Y2 492 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms