RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 ADM5C9JUS6 153 aa10.25□□□□□ -0.77
HLA-DPA1-241ENST00000417724 ATP5J2-PTCD1G3V325 749 aa10.25□□□□□ -0.77
HLA-DPA1-241ENST00000417724 CHL1O00533 1208 aa10.25□□□□□ -0.77
HLA-DPA1-241ENST00000417724 VIL1P09327 827 aaKnown RBP10.25□□□□□ -0.77
HLA-DPA1-241ENST00000417724 HSP90B1P14625 803 aaKnown RBP10.25□□□□□ -0.77
HLA-DPA1-241ENST00000417724 TRIM28Q13263 835 aaKnown RBP10.25□□□□□ -0.77
HLA-DPA1-241ENST00000417724 KIF4BQ2VIQ3 1234 aa10.25□□□□□ -0.77
HLA-DPA1-241ENST00000417724 TBC1D16Q8TBP0 767 aa10.25□□□□□ -0.77
HLA-DPA1-241ENST00000417724 ZNF428Q96B54 188 aa10.25□□□□□ -0.77
HLA-DPA1-241ENST00000417724 CSRNP1Q96S65 589 aa10.25□□□□□ -0.77
HLA-DPA1-241ENST00000417724 ISCA1Q9BUE6 129 aa10.25□□□□□ -0.77
HLA-DPA1-241ENST00000417724 DBF4Q9UBU7 674 aaPredicted RBP10.25□□□□□ -0.77
HLA-DPA1-241ENST00000417724 RTL9Q8NET4 1388 aa10.25□□□□□ -0.77
HLA-DPA1-241ENST00000417724 DDX60Q8IY21 1712 aaKnown RBP10.24□□□□□ -0.77
HLA-DPA1-241ENST00000417724 IRS4O14654 1257 aaPredicted RBP10.24□□□□□ -0.77
HLA-DPA1-241ENST00000417724 SLC10A3P09131 477 aa10.24□□□□□ -0.77
HLA-DPA1-241ENST00000417724 FKBP1BP68106 108 aa10.24□□□□□ -0.77
HLA-DPA1-241ENST00000417724 NEUROD2Q15784 382 aa10.24□□□□□ -0.77
HLA-DPA1-241ENST00000417724 RTL5Q5HYW3 569 aaPredicted RBP10.24□□□□□ -0.77
HLA-DPA1-241ENST00000417724 HDGFL1Q5TGJ6 251 aa10.24□□□□□ -0.77
HLA-DPA1-241ENST00000417724 CTU1Q7Z7A3 348 aaKnown RBP10.24□□□□□ -0.77
HLA-DPA1-241ENST00000417724 HYPKQ9NX55 129 aa10.24□□□□□ -0.77
HLA-DPA1-241ENST00000417724 GGA3Q9NZ52 723 aa10.24□□□□□ -0.77
HLA-DPA1-241ENST00000417724 PODXL2Q9NZ53 605 aa10.24□□□□□ -0.77
HLA-DPA1-241ENST00000417724 ANKIB1Q9P2G1 1089 aa10.24□□□□□ -0.77
HLA-DPA1-241ENST00000417724 LAS1LQ9Y4W2 734 aaKnown RBP10.24□□□□□ -0.77
HLA-DPA1-241ENST00000417724 HOXB7P09629 217 aa10.23□□□□□ -0.77
HLA-DPA1-241ENST00000417724 SOX10P56693 466 aa10.23□□□□□ -0.77
HLA-DPA1-241ENST00000417724 SCARF1Q14162 830 aa10.23□□□□□ -0.77
HLA-DPA1-241ENST00000417724 KRT24Q2M2I5 525 aa10.23□□□□□ -0.77
HLA-DPA1-241ENST00000417724 AGBL3Q8NEM8 1001 aa10.23□□□□□ -0.77
HLA-DPA1-241ENST00000417724 CDCA5Q96FF9 252 aa10.23□□□□□ -0.77
HLA-DPA1-241ENST00000417724 UFL1O94874 794 aa10.22□□□□□ -0.77
HLA-DPA1-241ENST00000417724 ZNF280AP59817 542 aaPredicted RBP10.22□□□□□ -0.77
HLA-DPA1-241ENST00000417724 RALBP1Q15311 655 aa10.22□□□□□ -0.77
HLA-DPA1-241ENST00000417724 PKN2Q16513 984 aaKnown RBP10.22□□□□□ -0.77
HLA-DPA1-241ENST00000417724 ANGEL2Q5VTE6 544 aaKnown RBP10.22□□□□□ -0.77
HLA-DPA1-241ENST00000417724 ZBTB38Q8NAP3 1195 aaPredicted RBP10.22□□□□□ -0.77
HLA-DPA1-241ENST00000417724 GGA1Q9UJY5 639 aa10.22□□□□□ -0.77
HLA-DPA1-241ENST00000417724 SCN9AQ15858 1988 aa10.22□□□□□ -0.77
HLA-DPA1-241ENST00000417724 USP17L8P0C7I0 530 aa10.21□□□□□ -0.77
HLA-DPA1-241ENST00000417724 RSBN1LQ6PCB5 846 aaPredicted RBP10.21□□□□□ -0.77
HLA-DPA1-241ENST00000417724 RIC3Q7Z5B4 369 aa10.21□□□□□ -0.77
HLA-DPA1-241ENST00000417724 HDAC9Q9UKV0 1011 aa10.21□□□□□ -0.77
HLA-DPA1-241ENST00000417724 ASTN2O75129 1339 aaPredicted RBP10.21□□□□□ -0.78
HLA-DPA1-241ENST00000417724 TNRC18O15417 2968 aaPredicted RBP10.21□□□□□ -0.78
HLA-DPA1-241ENST00000417724 CCDC152Q4G0S7 254 aa10.2□□□□□ -0.78
HLA-DPA1-241ENST00000417724 PRPF38BQ5VTL8 546 aaKnown RBP10.2□□□□□ -0.78
HLA-DPA1-241ENST00000417724 DUSP27Q5VZP5 1158 aa10.2□□□□□ -0.78
HLA-DPA1-241ENST00000417724 PODNQ7Z5L7 613 aa10.2□□□□□ -0.78
HLA-DPA1-241ENST00000417724 RASAL3Q86YV0 1011 aa10.2□□□□□ -0.78
HLA-DPA1-241ENST00000417724 RUNDC1Q96C34 613 aa10.2□□□□□ -0.78
HLA-DPA1-241ENST00000417724 PITPNM2Q9BZ72 1349 aa10.2□□□□□ -0.78
HLA-DPA1-241ENST00000417724 MYOZ2Q9NPC6 264 aa10.2□□□□□ -0.78
HLA-DPA1-241ENST00000417724 SEC31BQ9NQW1 1179 aa10.2□□□□□ -0.78
HLA-DPA1-241ENST00000417724 TRIM35Q9UPQ4 493 aa10.2□□□□□ -0.78
HLA-DPA1-241ENST00000417724 ZNF609O15014 1411 aa10.19□□□□□ -0.78
HLA-DPA1-241ENST00000417724 XDHP47989 1333 aa10.19□□□□□ -0.78
HLA-DPA1-241ENST00000417724 USP17L3A6NCW0 530 aa10.19□□□□□ -0.78
HLA-DPA1-241ENST00000417724 USP17L4A6NCW7 530 aa10.19□□□□□ -0.78
HLA-DPA1-241ENST00000417724 GOLGA2Q08379 1002 aa10.19□□□□□ -0.78
HLA-DPA1-241ENST00000417724 USP17L1Q7RTZ2 530 aa10.19□□□□□ -0.78
HLA-DPA1-241ENST00000417724 CCDC146Q8IYE0 955 aa10.19□□□□□ -0.78
HLA-DPA1-241ENST00000417724 CCDC191Q8NCU4 936 aa10.19□□□□□ -0.78
HLA-DPA1-241ENST00000417724 GMLQ99445 158 aa10.19□□□□□ -0.78
HLA-DPA1-241ENST00000417724 HPS5Q9UPZ3 1129 aa10.19□□□□□ -0.78
HLA-DPA1-241ENST00000417724 PSME4Q14997 1843 aa10.19□□□□□ -0.78
HLA-DPA1-241ENST00000417724 UBE2Q2LH0YL09 131 aa10.18□□□□□ -0.78
HLA-DPA1-241ENST00000417724 PDE8AO60658 829 aa10.18□□□□□ -0.78
HLA-DPA1-241ENST00000417724 TBC1D8O95759 1140 aa10.18□□□□□ -0.78
HLA-DPA1-241ENST00000417724 PCCAP05165 728 aaPredicted RBP10.18□□□□□ -0.78
HLA-DPA1-241ENST00000417724 ATP2B4P23634 1241 aa10.18□□□□□ -0.78
HLA-DPA1-241ENST00000417724 NF2P35240 595 aa10.18□□□□□ -0.78
HLA-DPA1-241ENST00000417724 TTLL12Q14166 644 aaPredicted RBP10.18□□□□□ -0.78
HLA-DPA1-241ENST00000417724 ANKRD18AQ8IVF6 992 aa10.18□□□□□ -0.78
HLA-DPA1-241ENST00000417724 OGFOD1Q8N543 542 aa10.18□□□□□ -0.78
HLA-DPA1-241ENST00000417724 ZNF296Q8WUU4 475 aaPredicted RBP10.18□□□□□ -0.78
HLA-DPA1-241ENST00000417724 PAPPA2Q9BXP8 1791 aa10.18□□□□□ -0.78
HLA-DPA1-241ENST00000417724 COL4A1P02462 1669 aa10.18□□□□□ -0.78
HLA-DPA1-241ENST00000417724 TM4SF4P48230 202 aa10.17□□□□□ -0.78
HLA-DPA1-241ENST00000417724 WDR43Q15061 677 aaKnown RBP eCLIP10.17□□□□□ -0.78
HLA-DPA1-241ENST00000417724 NOM1Q5C9Z4 860 aaKnown RBP10.17□□□□□ -0.78
HLA-DPA1-241ENST00000417724 MOB2Q70IA6 237 aa10.17□□□□□ -0.78
HLA-DPA1-241ENST00000417724 MYD88Q99836 296 aa10.17□□□□□ -0.78
HLA-DPA1-241ENST00000417724 CHMP4AQ9BY43 222 aa10.17□□□□□ -0.78
HLA-DPA1-241ENST00000417724 CWC25Q9NXE8 425 aaPredicted RBP10.17□□□□□ -0.78
HLA-DPA1-241ENST00000417724 GPR25O00155 361 aa10.16□□□□□ -0.78
HLA-DPA1-241ENST00000417724 DDX58O95786 925 aaKnown RBP10.16□□□□□ -0.78
HLA-DPA1-241ENST00000417724 MMP14P50281 582 aa10.16□□□□□ -0.78
HLA-DPA1-241ENST00000417724 SREBF2Q12772 1141 aa10.16□□□□□ -0.78
HLA-DPA1-241ENST00000417724 NBPF9Q3BBW0 867 aa10.16□□□□□ -0.78
HLA-DPA1-241ENST00000417724 PRAMEF18Q5VWM3 479 aa10.16□□□□□ -0.78
HLA-DPA1-241ENST00000417724 CCDC85AQ96PX6 553 aaPredicted RBP10.16□□□□□ -0.78
HLA-DPA1-241ENST00000417724 CDC5LQ99459 802 aaKnown RBP10.16□□□□□ -0.78
HLA-DPA1-241ENST00000417724 PHAXQ9H814 394 aaKnown RBP10.16□□□□□ -0.78
HLA-DPA1-241ENST00000417724 MBIPQ9NS73 344 aa10.16□□□□□ -0.78
HLA-DPA1-241ENST00000417724 MYO3BQ8WXR4 1341 aa10.15□□□□□ -0.78
HLA-DPA1-241ENST00000417724 ELL2O00472 640 aaPredicted RBP10.15□□□□□ -0.78
HLA-DPA1-241ENST00000417724 CALD1Q05682 793 aaKnown RBP10.15□□□□□ -0.78
HLA-DPA1-241ENST00000417724 FBXO46Q6PJ61 603 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms