RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 FAM160A1Q05DH4 1040 aa9.2□□□□□ -0.94
VRK2-203ENST00000417641 TRIM65Q6PJ69 517 aa9.2□□□□□ -0.94
VRK2-203ENST00000417641 SYT10Q6XYQ8 523 aa9.2□□□□□ -0.94
VRK2-203ENST00000417641 AOPEPQ8N6M6 819 aa9.2□□□□□ -0.94
VRK2-203ENST00000417641 NFATC2IPQ8NCF5 419 aa9.2□□□□□ -0.94
VRK2-203ENST00000417641 CCDC150Q8NCX0 1101 aa9.2□□□□□ -0.94
VRK2-203ENST00000417641 USP28Q96RU2 1077 aa9.2□□□□□ -0.94
VRK2-203ENST00000417641 LLPHQ9BRT6 129 aaKnown RBP9.2□□□□□ -0.94
VRK2-203ENST00000417641 FTOQ9C0B1 505 aaKnown RBP eCLIP9.2□□□□□ -0.94
VRK2-203ENST00000417641 TLR7Q9NYK1 1049 aaKnown RBP9.2□□□□□ -0.94
VRK2-203ENST00000417641 ORC3Q9UBD5 711 aaPredicted RBP9.2□□□□□ -0.94
VRK2-203ENST00000417641 ADAMTS13Q76LX8 1427 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 MRC1P22897 1456 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 NUTM2FA1L443 756 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 VGLL3A8MV65 326 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 ATP8B1O43520 1251 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 SCRN1Q12765 414 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 NUTM2GQ5VZR2 741 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 ATL3Q6DD88 541 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 ILDR1Q86SU0 546 aaPredicted RBP9.19□□□□□ -0.94
VRK2-203ENST00000417641 CEP57L1Q8IYX8 460 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 FMR1NBQ8N0W7 255 aaPredicted RBP9.19□□□□□ -0.94
VRK2-203ENST00000417641 UTYO14607 1347 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 PHLPP2Q6ZVD8 1323 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 NCAPD2Q15021 1401 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 PFKFB2O60825 505 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 AMPHP49418 695 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 KRT32Q14532 448 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 NCAPHQ15003 741 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 ARHGAP29Q52LW3 1261 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 MUM1L1Q5H9M0 696 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 Q6ZUG5 572 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 NSUN7Q8NE18 718 aaKnown RBP9.19□□□□□ -0.94
VRK2-203ENST00000417641 NEK1Q96PY6 1258 aa9.19□□□□□ -0.94
VRK2-203ENST00000417641 FEZ2Q9UHY8 353 aaPredicted RBP9.19□□□□□ -0.94
VRK2-203ENST00000417641 KDM3BQ7LBC6 1761 aa9.18□□□□□ -0.94
VRK2-203ENST00000417641 NPHP1O15259 732 aa9.18□□□□□ -0.94
VRK2-203ENST00000417641 TADA3O75528 432 aa9.18□□□□□ -0.94
VRK2-203ENST00000417641 EIF2S2P20042 333 aaKnown RBP9.18□□□□□ -0.94
VRK2-203ENST00000417641 HOXC9P31274 260 aa9.18□□□□□ -0.94
VRK2-203ENST00000417641 ETF1P62495 437 aaKnown RBP9.18□□□□□ -0.94
VRK2-203ENST00000417641 PDE4CQ08493 712 aa9.18□□□□□ -0.94
VRK2-203ENST00000417641 XPO4Q9C0E2 1151 aaKnown RBP9.18□□□□□ -0.94
VRK2-203ENST00000417641 CCDC8Q9H0W5 538 aaPredicted RBP9.18□□□□□ -0.94
VRK2-203ENST00000417641 TMX1Q9H3N1 280 aa9.18□□□□□ -0.94
VRK2-203ENST00000417641 SALL1Q9NSC2 1324 aa9.18□□□□□ -0.94
VRK2-203ENST00000417641 KCNQ3O43525 872 aa9.17□□□□□ -0.94
VRK2-203ENST00000417641 CCDC73Q6ZRK6 1079 aa9.17□□□□□ -0.94
VRK2-203ENST00000417641 BOLA2Q9H3K6 86 aa9.17□□□□□ -0.94
VRK2-203ENST00000417641 MYH15Q9Y2K3 1946 aa9.17□□□□□ -0.94
VRK2-203ENST00000417641 PIK3C2AO00443 1686 aa9.17□□□□□ -0.94
VRK2-203ENST00000417641 A0A1W2PQ27 194 aa9.17□□□□□ -0.94
VRK2-203ENST00000417641 A0A1W2PQ64 194 aa9.17□□□□□ -0.94
VRK2-203ENST00000417641 A0A1W2PQD8 194 aa9.17□□□□□ -0.94
VRK2-203ENST00000417641 H3BQV1 296 aa9.17□□□□□ -0.94
VRK2-203ENST00000417641 KINO60870 393 aaKnown RBP9.17□□□□□ -0.94
VRK2-203ENST00000417641 ANXA1P04083 346 aa9.17□□□□□ -0.94
VRK2-203ENST00000417641 CEBPZQ03701 1054 aaKnown RBP9.17□□□□□ -0.94
VRK2-203ENST00000417641 DHX8Q14562 1220 aaKnown RBP9.17□□□□□ -0.94
VRK2-203ENST00000417641 IFFO2Q5TF58 517 aa9.17□□□□□ -0.94
VRK2-203ENST00000417641 REXO1L1PQ8IX06 675 aa9.17□□□□□ -0.94
VRK2-203ENST00000417641 FSIP1Q8NA03 581 aa9.17□□□□□ -0.94
VRK2-203ENST00000417641 SYTL4Q96C24 671 aaPredicted RBP9.17□□□□□ -0.94
VRK2-203ENST00000417641 SUCLG2Q96I99 432 aa9.17□□□□□ -0.94
VRK2-203ENST00000417641 FSD1Q9BTV5 496 aa9.17□□□□□ -0.94
VRK2-203ENST00000417641 AGXT2Q9BYV1 514 aa9.17□□□□□ -0.94
VRK2-203ENST00000417641 TSPYL1Q9H0U9 437 aa9.17□□□□□ -0.94
VRK2-203ENST00000417641 RFX7Q2KHR2 1363 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 SASH3O75995 380 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 TBC1D8O95759 1140 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 CYP21A2P08686 494 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 STOX1Q6ZVD7 989 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 TMC6Q7Z403 805 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 ERCC4Q92889 916 aaPredicted RBP9.16□□□□□ -0.94
VRK2-203ENST00000417641 SRRTQ9BXP5 876 aaKnown RBP9.16□□□□□ -0.94
VRK2-203ENST00000417641 NAT10Q9H0A0 1025 aaKnown RBP9.16□□□□□ -0.94
VRK2-203ENST00000417641 HSD3B7Q9H2F3 369 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 PCDHA7Q9UN72 937 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 HEG1Q9ULI3 1381 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 CDK11BP21127 795 aaKnown RBP9.16□□□□□ -0.94
VRK2-203ENST00000417641 RAD51AP2Q09MP3 1159 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 DPCR1Q3MIW9 517 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 ADALQ6DHV7 355 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 TMCO3Q6UWJ1 677 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 KSR2Q6VAB6 950 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 ZNF396Q96N95 335 aaPredicted RBP9.16□□□□□ -0.94
VRK2-203ENST00000417641 CHMP4AQ9BY43 222 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 IFNKQ9P0W0 207 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 KIAA1468Q9P260 1216 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 MAP3K2Q9Y2U5 619 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 PARP3Q9Y6F1 533 aa9.16□□□□□ -0.94
VRK2-203ENST00000417641 MARF1Q9Y4F3 1742 aaKnown RBP9.16□□□□□ -0.94
VRK2-203ENST00000417641 PTPDC1A2A3K4 754 aa9.15□□□□□ -0.94
VRK2-203ENST00000417641 SFPQP23246 707 aaKnown RBP eCLIP9.15□□□□□ -0.94
VRK2-203ENST00000417641 TPM4P67936 248 aa9.15□□□□□ -0.94
VRK2-203ENST00000417641 EXOSC10Q01780 885 aaKnown RBP9.15□□□□□ -0.94
VRK2-203ENST00000417641 CCDC158Q5M9N0 1113 aa9.15□□□□□ -0.94
VRK2-203ENST00000417641 SMARCE1Q969G3 411 aa9.15□□□□□ -0.94
VRK2-203ENST00000417641 LGR6Q9HBX8 967 aa9.15□□□□□ -0.94
VRK2-203ENST00000417641 RTEL1Q9NZ71 1219 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms