RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 GGA1Q9UJY5 639 aa23.56■■□□□ 1.36
VPS16-204ENST00000417508 MYH16Q9H6N6 1097 aa23.55■■□□□ 1.36
VPS16-204ENST00000417508 G3V3G9 751 aa23.54■■□□□ 1.36
VPS16-204ENST00000417508 PSMD14O00487 310 aa23.54■■□□□ 1.36
VPS16-204ENST00000417508 ECE2O60344 883 aa23.54■■□□□ 1.36
VPS16-204ENST00000417508 VEGFBP49765 207 aa23.54■■□□□ 1.36
VPS16-204ENST00000417508 EXOSC9Q06265 439 aaKnown RBP23.54■■□□□ 1.36
VPS16-204ENST00000417508 FKBP5Q13451 457 aaPredicted RBP23.54■■□□□ 1.36
VPS16-204ENST00000417508 CWF19L2Q2TBE0 894 aaKnown RBP23.54■■□□□ 1.36
VPS16-204ENST00000417508 DCAF8Q5TAQ9 597 aa23.54■■□□□ 1.36
VPS16-204ENST00000417508 FAM9BQ8IZU0 186 aa23.54■■□□□ 1.36
VPS16-204ENST00000417508 DNAAF4Q8WXU2 420 aa23.54■■□□□ 1.36
VPS16-204ENST00000417508 COL4A1P02462 1669 aa23.54■■□□□ 1.36
VPS16-204ENST00000417508 RTL9Q8NET4 1388 aa23.53■■□□□ 1.36
VPS16-204ENST00000417508 MYH3P11055 1940 aa23.53■■□□□ 1.36
VPS16-204ENST00000417508 UFL1O94874 794 aa23.53■■□□□ 1.36
VPS16-204ENST00000417508 GCKRQ14397 625 aa23.53■■□□□ 1.36
VPS16-204ENST00000417508 LINS1Q8NG48 757 aa23.53■■□□□ 1.36
VPS16-204ENST00000417508 CCDC85AQ96PX6 553 aaPredicted RBP23.53■■□□□ 1.36
VPS16-204ENST00000417508 BSDC1Q9NW68 430 aaPredicted RBP23.53■■□□□ 1.36
VPS16-204ENST00000417508 ABT1Q9ULW3 272 aaKnown RBP23.53■■□□□ 1.36
VPS16-204ENST00000417508 TRPM7Q96QT4 1865 aa23.53■■□□□ 1.36
VPS16-204ENST00000417508 XDHP47989 1333 aa23.53■■□□□ 1.36
VPS16-204ENST00000417508 ATP2B4P23634 1241 aa23.52■■□□□ 1.36
VPS16-204ENST00000417508 DOK7Q18PE1 504 aa23.52■■□□□ 1.36
VPS16-204ENST00000417508 MICALL2Q8IY33 904 aa23.52■■□□□ 1.36
VPS16-204ENST00000417508 PLA2G12BQ9BX93 195 aa23.52■■□□□ 1.36
VPS16-204ENST00000417508 VIL1P09327 827 aaKnown RBP23.51■■□□□ 1.35
VPS16-204ENST00000417508 HIRAP54198 1017 aaPredicted RBP23.51■■□□□ 1.35
VPS16-204ENST00000417508 COL13A1Q5TAT6 717 aaPredicted RBP23.51■■□□□ 1.35
VPS16-204ENST00000417508 CDC37L1Q7L3B6 337 aa23.51■■□□□ 1.35
VPS16-204ENST00000417508 UBE3BQ7Z3V4 1068 aa23.51■■□□□ 1.35
VPS16-204ENST00000417508 ZBTB12Q9Y330 459 aaPredicted RBP23.51■■□□□ 1.35
VPS16-204ENST00000417508 CST9Q5W186 159 aa23.5■■□□□ 1.35
VPS16-204ENST00000417508 PCNTO95613 3336 aa23.5■■□□□ 1.35
VPS16-204ENST00000417508 GREM2Q9H772 168 aa23.49■■□□□ 1.35
VPS16-204ENST00000417508 TRAF5O00463 557 aa23.48■■□□□ 1.35
VPS16-204ENST00000417508 TRPM4Q8TD43 1214 aa23.48■■□□□ 1.35
VPS16-204ENST00000417508 GPR101Q96P66 508 aaPredicted RBP23.48■■□□□ 1.35
VPS16-204ENST00000417508 SPINK5Q9NQ38 1064 aaPredicted RBP23.48■■□□□ 1.35
VPS16-204ENST00000417508 KCNQ5Q9NR82 932 aa23.48■■□□□ 1.35
VPS16-204ENST00000417508 MINPP1Q9UNW1 487 aa23.48■■□□□ 1.35
VPS16-204ENST00000417508 CSF1RP07333 972 aa23.47■■□□□ 1.35
VPS16-204ENST00000417508 IGHMBP2P38935 993 aaKnown RBP23.47■■□□□ 1.35
VPS16-204ENST00000417508 ECE1P42892 770 aa23.47■■□□□ 1.35
VPS16-204ENST00000417508 CASP7P55210 303 aa23.47■■□□□ 1.35
VPS16-204ENST00000417508 FMR1Q06787 632 aaKnown RBP eCLIP23.47■■□□□ 1.35
VPS16-204ENST00000417508 PODNQ7Z5L7 613 aa23.47■■□□□ 1.35
VPS16-204ENST00000417508 WDR33Q9C0J8 1336 aaKnown RBP23.47■■□□□ 1.35
VPS16-204ENST00000417508 AGBL3Q8NEM8 1001 aa23.46■■□□□ 1.35
VPS16-204ENST00000417508 AIDAQ96BJ3 306 aa23.46■■□□□ 1.35
VPS16-204ENST00000417508 GLIS2Q9BZE0 524 aaPredicted RBP23.46■■□□□ 1.35
VPS16-204ENST00000417508 WBP1LQ9NX94 342 aa23.46■■□□□ 1.35
VPS16-204ENST00000417508 TLL2Q9Y6L7 1015 aa23.46■■□□□ 1.35
VPS16-204ENST00000417508 SHTN1A0MZ66 631 aa23.45■■□□□ 1.34
VPS16-204ENST00000417508 MAP2K1Q02750 393 aaPredicted RBP23.45■■□□□ 1.34
VPS16-204ENST00000417508 SAMD7Q7Z3H4 446 aa23.45■■□□□ 1.34
VPS16-204ENST00000417508 SCN9AQ15858 1988 aa23.44■■□□□ 1.34
VPS16-204ENST00000417508 CELF2O95319 508 aaKnown RBP23.44■■□□□ 1.34
VPS16-204ENST00000417508 ITGA6P23229 1130 aa23.44■■□□□ 1.34
VPS16-204ENST00000417508 HHIPL1Q96JK4 782 aa23.44■■□□□ 1.34
VPS16-204ENST00000417508 ANKRD2Q9GZV1 360 aa23.44■■□□□ 1.34
VPS16-204ENST00000417508 LEMD3Q9Y2U8 911 aa23.44■■□□□ 1.34
VPS16-204ENST00000417508 POLR2AP24928 1970 aaKnown RBP23.43■■□□□ 1.34
VPS16-204ENST00000417508 ZNF609O15014 1411 aa23.43■■□□□ 1.34
VPS16-204ENST00000417508 CCT4P50991 539 aaKnown RBP23.43■■□□□ 1.34
VPS16-204ENST00000417508 TBC1D10BQ4KMP7 808 aaPredicted RBP23.43■■□□□ 1.34
VPS16-204ENST00000417508 BEND3Q5T5X7 828 aa23.43■■□□□ 1.34
VPS16-204ENST00000417508 RSBN1LQ6PCB5 846 aaPredicted RBP23.43■■□□□ 1.34
VPS16-204ENST00000417508 MPHOSPH8Q99549 860 aa23.43■■□□□ 1.34
VPS16-204ENST00000417508 MED23Q9ULK4 1368 aa23.42■■□□□ 1.34
VPS16-204ENST00000417508 CTCFP49711 727 aaPredicted RBP23.42■■□□□ 1.34
VPS16-204ENST00000417508 SAPCD2Q86UD0 394 aa23.42■■□□□ 1.34
VPS16-204ENST00000417508 TNS4Q8IZW8 715 aa23.42■■□□□ 1.34
VPS16-204ENST00000417508 DCPSQ96C86 337 aaKnown RBP23.42■■□□□ 1.34
VPS16-204ENST00000417508 CAPNS2Q96L46 248 aa23.42■■□□□ 1.34
VPS16-204ENST00000417508 ZNF521Q96K83 1311 aa23.41■■□□□ 1.34
VPS16-204ENST00000417508 USP17L3A6NCW0 530 aa23.41■■□□□ 1.34
VPS16-204ENST00000417508 USP17L4A6NCW7 530 aa23.41■■□□□ 1.34
VPS16-204ENST00000417508 FOXN1O15353 648 aa23.41■■□□□ 1.34
VPS16-204ENST00000417508 USP17L1Q7RTZ2 530 aa23.41■■□□□ 1.34
VPS16-204ENST00000417508 USP48Q86UV5 1035 aa23.41■■□□□ 1.34
VPS16-204ENST00000417508 PRDM10Q9NQV6 1147 aa23.41■■□□□ 1.34
VPS16-204ENST00000417508 PSME4Q14997 1843 aa23.4■■□□□ 1.34
VPS16-204ENST00000417508 ANKRD18BA2A2Z9 1011 aa23.4■■□□□ 1.34
VPS16-204ENST00000417508 F6X3S4 739 aa23.4■■□□□ 1.34
VPS16-204ENST00000417508 MAP2K2P36507 400 aa23.4■■□□□ 1.34
VPS16-204ENST00000417508 ZNF280AP59817 542 aaPredicted RBP23.4■■□□□ 1.34
VPS16-204ENST00000417508 RBM26Q5T8P6 1007 aaKnown RBP23.4■■□□□ 1.34
VPS16-204ENST00000417508 PAXIP1Q6ZW49 1069 aaPredicted RBP23.4■■□□□ 1.34
VPS16-204ENST00000417508 COA1Q9GZY4 146 aa23.4■■□□□ 1.34
VPS16-204ENST00000417508 MMP14P50281 582 aa23.39■■□□□ 1.33
VPS16-204ENST00000417508 KIF4BQ2VIQ3 1234 aa23.39■■□□□ 1.33
VPS16-204ENST00000417508 FAM161AQ3B820 660 aa23.39■■□□□ 1.33
VPS16-204ENST00000417508 KRT26Q7Z3Y9 468 aa23.39■■□□□ 1.33
VPS16-204ENST00000417508 GMLQ99445 158 aa23.39■■□□□ 1.33
VPS16-204ENST00000417508 ALDH1L1O75891 902 aa23.38■■□□□ 1.33
VPS16-204ENST00000417508 EGFRP00533 1210 aa23.38■■□□□ 1.33
VPS16-204ENST00000417508 CYP4F22Q6NT55 531 aa23.38■■□□□ 1.33
VPS16-204ENST00000417508 ZNF804BA4D1E1 1349 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms