RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 CAPNS2Q96L46 248 aa9.5□□□□□ -0.89
CASP4-202ENST00000417440 BEGAINQ9BUH8 593 aa9.5□□□□□ -0.89
CASP4-202ENST00000417440 PNNQ9H307 717 aaKnown RBP9.5□□□□□ -0.89
CASP4-202ENST00000417440 ZNF408Q9H9D4 720 aa9.5□□□□□ -0.89
CASP4-202ENST00000417440 TSKSQ9UJT2 592 aa9.5□□□□□ -0.89
CASP4-202ENST00000417440 LAS1LQ9Y4W2 734 aaKnown RBP9.5□□□□□ -0.89
CASP4-202ENST00000417440 COL4A5P29400 1685 aa9.5□□□□□ -0.89
CASP4-202ENST00000417440 ARFGEF2Q9Y6D5 1785 aa9.5□□□□□ -0.89
CASP4-202ENST00000417440 RAD17O75943 681 aa9.49□□□□□ -0.89
CASP4-202ENST00000417440 ECE1P42892 770 aa9.49□□□□□ -0.89
CASP4-202ENST00000417440 GMPSP49915 693 aaPredicted RBP9.49□□□□□ -0.89
CASP4-202ENST00000417440 NEUROD2Q15784 382 aa9.49□□□□□ -0.89
CASP4-202ENST00000417440 GRIPAP1Q4V328 841 aa9.49□□□□□ -0.89
CASP4-202ENST00000417440 CST9Q5W186 159 aa9.49□□□□□ -0.89
CASP4-202ENST00000417440 COPS6Q7L5N1 327 aa9.49□□□□□ -0.89
CASP4-202ENST00000417440 GPR101Q96P66 508 aaPredicted RBP9.49□□□□□ -0.89
CASP4-202ENST00000417440 BCL2L13Q9BXK5 485 aa9.49□□□□□ -0.89
CASP4-202ENST00000417440 ADARB2Q9NS39 739 aaKnown RBP9.49□□□□□ -0.89
CASP4-202ENST00000417440 GPRC5DQ9NZD1 345 aa9.49□□□□□ -0.89
CASP4-202ENST00000417440 ZNRF3Q9ULT6 936 aa9.49□□□□□ -0.89
CASP4-202ENST00000417440 ATP6V0A2Q9Y487 856 aa9.49□□□□□ -0.89
CASP4-202ENST00000417440 ABCC4O15439 1325 aa9.49□□□□□ -0.89
CASP4-202ENST00000417440 SCN4AP35499 1836 aa9.49□□□□□ -0.89
CASP4-202ENST00000417440 SNED1Q8TER0 1413 aa9.48□□□□□ -0.89
CASP4-202ENST00000417440 AOC2O75106 756 aa9.48□□□□□ -0.89
CASP4-202ENST00000417440 CELF2O95319 508 aaKnown RBP9.48□□□□□ -0.89
CASP4-202ENST00000417440 CXCL9Q07325 125 aa9.48□□□□□ -0.89
CASP4-202ENST00000417440 PDIA6Q15084 440 aa9.48□□□□□ -0.89
CASP4-202ENST00000417440 PLPP6Q8IY26 295 aa9.48□□□□□ -0.89
CASP4-202ENST00000417440 MPNDQ8N594 471 aa9.48□□□□□ -0.89
CASP4-202ENST00000417440 SUPT20HQ8NEM7 779 aa9.48□□□□□ -0.89
CASP4-202ENST00000417440 XAGE3Q8WTP9 111 aa9.48□□□□□ -0.89
CASP4-202ENST00000417440 ABHD8Q96I13 439 aa9.48□□□□□ -0.89
CASP4-202ENST00000417440 GLIS2Q9BZE0 524 aaPredicted RBP9.48□□□□□ -0.89
CASP4-202ENST00000417440 TRMT112Q9UI30 125 aaKnown RBP9.48□□□□□ -0.89
CASP4-202ENST00000417440 CCDC85CA6NKD9 419 aa9.47□□□□□ -0.89
CASP4-202ENST00000417440 KRT24Q2M2I5 525 aa9.47□□□□□ -0.89
CASP4-202ENST00000417440 SLC10A5Q5PT55 438 aa9.47□□□□□ -0.89
CASP4-202ENST00000417440 CIAPIN1Q6FI81 312 aa9.47□□□□□ -0.89
CASP4-202ENST00000417440 DDX46Q7L014 1031 aaKnown RBP9.47□□□□□ -0.89
CASP4-202ENST00000417440 CCDC146Q8IYE0 955 aa9.47□□□□□ -0.89
CASP4-202ENST00000417440 ERBB4Q15303 1308 aa9.47□□□□□ -0.89
CASP4-202ENST00000417440 IBTKQ9P2D0 1353 aaPredicted RBP9.47□□□□□ -0.89
CASP4-202ENST00000417440 SHTN1A0MZ66 631 aa9.46□□□□□ -0.9
CASP4-202ENST00000417440 BBOX1O75936 387 aa9.46□□□□□ -0.9
CASP4-202ENST00000417440 TMPOP42166 694 aaKnown RBP9.46□□□□□ -0.9
CASP4-202ENST00000417440 TNIP1Q15025 636 aa9.46□□□□□ -0.9
CASP4-202ENST00000417440 HSP90AB3PQ58FF7 597 aa9.46□□□□□ -0.9
CASP4-202ENST00000417440 RTL5Q5HYW3 569 aaPredicted RBP9.46□□□□□ -0.9
CASP4-202ENST00000417440 LRP10Q7Z4F1 713 aa9.46□□□□□ -0.9
CASP4-202ENST00000417440 NLRP10Q86W26 655 aa9.46□□□□□ -0.9
CASP4-202ENST00000417440 SP8Q8IXZ3 490 aa9.46□□□□□ -0.9
CASP4-202ENST00000417440 TLL2Q9Y6L7 1015 aa9.46□□□□□ -0.9
CASP4-202ENST00000417440 RIC1Q4ADV7 1423 aa9.46□□□□□ -0.9
CASP4-202ENST00000417440 LTBP1Q14766 1721 aa9.45□□□□□ -0.9
CASP4-202ENST00000417440 ADAMTSL1Q8N6G6 1762 aa9.45□□□□□ -0.9
CASP4-202ENST00000417440 RIMBP2O15034 1052 aa9.45□□□□□ -0.9
CASP4-202ENST00000417440 HIRAP54198 1017 aaPredicted RBP9.45□□□□□ -0.9
CASP4-202ENST00000417440 LMOD3Q0VAK6 560 aa9.45□□□□□ -0.9
CASP4-202ENST00000417440 TCIRG1Q13488 830 aa9.45□□□□□ -0.9
CASP4-202ENST00000417440 GRAPQ13588 217 aa9.45□□□□□ -0.9
CASP4-202ENST00000417440 FAM161AQ3B820 660 aa9.45□□□□□ -0.9
CASP4-202ENST00000417440 DLK2Q6UY11 383 aa9.45□□□□□ -0.9
CASP4-202ENST00000417440 GRAPLQ8TC17 118 aaPredicted RBP9.45□□□□□ -0.9
CASP4-202ENST00000417440 TRPM4Q8TD43 1214 aa9.45□□□□□ -0.9
CASP4-202ENST00000417440 RTFDC1Q9BY42 306 aaPredicted RBP9.45□□□□□ -0.9
CASP4-202ENST00000417440 VPS33BQ9H267 617 aa9.45□□□□□ -0.9
CASP4-202ENST00000417440 EMILIN3Q9NT22 766 aa9.45□□□□□ -0.9
CASP4-202ENST00000417440 CNOT7Q9UIV1 285 aaKnown RBP9.45□□□□□ -0.9
CASP4-202ENST00000417440 SH3TC1Q8TE82 1336 aa9.45□□□□□ -0.9
CASP4-202ENST00000417440 LAMB4A4D0S4 1761 aa9.45□□□□□ -0.9
CASP4-202ENST00000417440 ATP5J2-PTCD1G3V325 749 aa9.44□□□□□ -0.9
CASP4-202ENST00000417440 C6orf229H3BNL8 230 aa9.44□□□□□ -0.9
CASP4-202ENST00000417440 H7C1D1 291 aa9.44□□□□□ -0.9
CASP4-202ENST00000417440 KIAA2012Q0VF49 1180 aa9.44□□□□□ -0.9
CASP4-202ENST00000417440 RBM26Q5T8P6 1007 aaKnown RBP9.44□□□□□ -0.9
CASP4-202ENST00000417440 SAPCD2Q86UD0 394 aa9.44□□□□□ -0.9
CASP4-202ENST00000417440 USP48Q86UV5 1035 aa9.44□□□□□ -0.9
CASP4-202ENST00000417440 FAM89AQ96GI7 184 aa9.44□□□□□ -0.9
CASP4-202ENST00000417440 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.44□□□□□ -0.9
CASP4-202ENST00000417440 CHPF2Q9P2E5 772 aa9.44□□□□□ -0.9
CASP4-202ENST00000417440 NSFL1CQ9UNZ2 370 aaKnown RBP9.44□□□□□ -0.9
CASP4-202ENST00000417440 NUP98P52948 1817 aa9.43□□□□□ -0.9
CASP4-202ENST00000417440 KDM3BQ7LBC6 1761 aa9.43□□□□□ -0.9
CASP4-202ENST00000417440 YDJCA8MPS7 323 aa9.43□□□□□ -0.9
CASP4-202ENST00000417440 MAP2K2P36507 400 aa9.43□□□□□ -0.9
CASP4-202ENST00000417440 DOK7Q18PE1 504 aa9.43□□□□□ -0.9
CASP4-202ENST00000417440 WASHC4Q2M389 1173 aa9.43□□□□□ -0.9
CASP4-202ENST00000417440 TBC1D10BQ4KMP7 808 aaPredicted RBP9.43□□□□□ -0.9
CASP4-202ENST00000417440 HDGFL1Q5TGJ6 251 aa9.43□□□□□ -0.9
CASP4-202ENST00000417440 CDC37L1Q7L3B6 337 aa9.43□□□□□ -0.9
CASP4-202ENST00000417440 SAMD7Q7Z3H4 446 aa9.43□□□□□ -0.9
CASP4-202ENST00000417440 DBNDD1Q9H9R9 158 aa9.43□□□□□ -0.9
CASP4-202ENST00000417440 TESPA1A2RU30 521 aaPredicted RBP9.42□□□□□ -0.9
CASP4-202ENST00000417440 PSMD14O00487 310 aa9.42□□□□□ -0.9
CASP4-202ENST00000417440 GPSM2P81274 684 aa9.42□□□□□ -0.9
CASP4-202ENST00000417440 CELF1Q92879 486 aaKnown RBP9.42□□□□□ -0.9
CASP4-202ENST00000417440 BABAM1Q9NWV8 329 aa9.42□□□□□ -0.9
CASP4-202ENST00000417440 CHL1O00533 1208 aa9.41□□□□□ -0.9
CASP4-202ENST00000417440 EGFRP00533 1210 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms