RNA–Protein interactions for RNA: ENST00000417239.1

SMIM12-201, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMIM12, Length 684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-201ENST00000417239 TRIOBPQ9H2D6 2365 aa11.62□□□□□ -0.55
SMIM12-201ENST00000417239 RIMBP2O15034 1052 aa11.62□□□□□ -0.55
SMIM12-201ENST00000417239 VIL1P09327 827 aaKnown RBP11.62□□□□□ -0.55
SMIM12-201ENST00000417239 ZNF280AP59817 542 aaPredicted RBP11.62□□□□□ -0.55
SMIM12-201ENST00000417239 EIF4A1P60842 406 aaKnown RBP11.62□□□□□ -0.55
SMIM12-201ENST00000417239 DOK7Q18PE1 504 aa11.62□□□□□ -0.55
SMIM12-201ENST00000417239 INTS3Q68E01 1043 aaKnown RBP11.62□□□□□ -0.55
SMIM12-201ENST00000417239 POLLQ9UGP5 575 aa11.62□□□□□ -0.55
SMIM12-201ENST00000417239 ECM29Q5VYK3 1845 aa11.62□□□□□ -0.55
SMIM12-201ENST00000417239 UBE2Q2LH0YL09 131 aa11.61□□□□□ -0.55
SMIM12-201ENST00000417239 SCARF1Q14162 830 aa11.61□□□□□ -0.55
SMIM12-201ENST00000417239 NLRP10Q86W26 655 aa11.61□□□□□ -0.55
SMIM12-201ENST00000417239 NSFL1CQ9UNZ2 370 aaKnown RBP11.61□□□□□ -0.55
SMIM12-201ENST00000417239 SPEF2Q9C093 1822 aa11.6□□□□□ -0.55
SMIM12-201ENST00000417239 C6orf229H3BNL8 230 aa11.6□□□□□ -0.55
SMIM12-201ENST00000417239 GPSM2P81274 684 aa11.6□□□□□ -0.55
SMIM12-201ENST00000417239 SREBF2Q12772 1141 aa11.6□□□□□ -0.55
SMIM12-201ENST00000417239 PDIA6Q15084 440 aa11.6□□□□□ -0.55
SMIM12-201ENST00000417239 OTOP1Q7RTM1 612 aa11.6□□□□□ -0.55
SMIM12-201ENST00000417239 PNISRQ8TF01 805 aaKnown RBP11.6□□□□□ -0.55
SMIM12-201ENST00000417239 CELF1Q92879 486 aaKnown RBP11.6□□□□□ -0.55
SMIM12-201ENST00000417239 THUMPD2Q9BTF0 503 aaKnown RBP11.6□□□□□ -0.55
SMIM12-201ENST00000417239 SCAF8Q9UPN6 1271 aaKnown RBP11.6□□□□□ -0.55
SMIM12-201ENST00000417239 SH3TC1Q8TE82 1336 aa11.6□□□□□ -0.55
SMIM12-201ENST00000417239 EN2P19622 333 aaPredicted RBP11.59□□□□□ -0.55
SMIM12-201ENST00000417239 MKRN3Q13064 507 aaKnown RBP11.59□□□□□ -0.55
SMIM12-201ENST00000417239 EYA3Q99504 573 aa11.59□□□□□ -0.55
SMIM12-201ENST00000417239 TRIM17Q9Y577 477 aa11.59□□□□□ -0.55
SMIM12-201ENST00000417239 OTOFQ9HC10 1997 aa11.58□□□□□ -0.56
SMIM12-201ENST00000417239 DLL1O00548 723 aa11.58□□□□□ -0.56
SMIM12-201ENST00000417239 U2AF1L5P0DN76 240 aaPredicted RBP11.58□□□□□ -0.56
SMIM12-201ENST00000417239 U2AF1Q01081 240 aaKnown RBP eCLIP11.58□□□□□ -0.56
SMIM12-201ENST00000417239 PROSER3Q2NL68 480 aa11.58□□□□□ -0.56
SMIM12-201ENST00000417239 PRAMEF18Q5VWM3 479 aa11.58□□□□□ -0.56
SMIM12-201ENST00000417239 RSBN1LQ6PCB5 846 aaPredicted RBP11.58□□□□□ -0.56
SMIM12-201ENST00000417239 AGBL3Q8NEM8 1001 aa11.58□□□□□ -0.56
SMIM12-201ENST00000417239 TBC1D16Q8TBP0 767 aa11.58□□□□□ -0.56
SMIM12-201ENST00000417239 ARMC5Q96C12 935 aa11.58□□□□□ -0.56
SMIM12-201ENST00000417239 CFAP53Q96M91 514 aa11.58□□□□□ -0.56
SMIM12-201ENST00000417239 MYOZ2Q9NPC6 264 aa11.58□□□□□ -0.56
SMIM12-201ENST00000417239 TRMT112Q9UI30 125 aaKnown RBP11.58□□□□□ -0.56
SMIM12-201ENST00000417239 UNC80Q8N2C7 3258 aa11.57□□□□□ -0.56
SMIM12-201ENST00000417239 CNGB1Q14028 1251 aaPredicted RBP11.57□□□□□ -0.56
SMIM12-201ENST00000417239 HSP90AB3PQ58FF7 597 aa11.57□□□□□ -0.56
SMIM12-201ENST00000417239 GMLQ99445 158 aa11.57□□□□□ -0.56
SMIM12-201ENST00000417239 NUDCQ9Y266 331 aa11.57□□□□□ -0.56
SMIM12-201ENST00000417239 LAMA3Q16787 3333 aa11.57□□□□□ -0.56
SMIM12-201ENST00000417239 ALDH1A1P00352 501 aa11.56□□□□□ -0.56
SMIM12-201ENST00000417239 ANXA1P04083 346 aa11.56□□□□□ -0.56
SMIM12-201ENST00000417239 NECTIN2Q92692 538 aa11.56□□□□□ -0.56
SMIM12-201ENST00000417239 OTUD5Q96G74 571 aa11.56□□□□□ -0.56
SMIM12-201ENST00000417239 ZC3H12CQ9C0D7 883 aaKnown RBP11.56□□□□□ -0.56
SMIM12-201ENST00000417239 PTPN22Q9Y2R2 807 aa11.56□□□□□ -0.56
SMIM12-201ENST00000417239 CLSPNQ9HAW4 1339 aa11.56□□□□□ -0.56
SMIM12-201ENST00000417239 ZSWIM8A7E2V4 1837 aa11.56□□□□□ -0.56
SMIM12-201ENST00000417239 CUL9Q8IWT3 2517 aa11.55□□□□□ -0.56
SMIM12-201ENST00000417239 USP17L8P0C7I0 530 aa11.55□□□□□ -0.56
SMIM12-201ENST00000417239 PTPN12Q05209 780 aaKnown RBP11.55□□□□□ -0.56
SMIM12-201ENST00000417239 TCIRG1Q13488 830 aa11.55□□□□□ -0.56
SMIM12-201ENST00000417239 TTLL12Q14166 644 aaPredicted RBP11.55□□□□□ -0.56
SMIM12-201ENST00000417239 SF3B3Q15393 1217 aaKnown RBP11.55□□□□□ -0.56
SMIM12-201ENST00000417239 SPRYD7Q5W111 196 aa11.55□□□□□ -0.56
SMIM12-201ENST00000417239 PODXL2Q9NZ53 605 aa11.55□□□□□ -0.56
SMIM12-201ENST00000417239 MYH3P11055 1940 aa11.54□□□□□ -0.56
SMIM12-201ENST00000417239 NBPF9Q3BBW0 867 aa11.54□□□□□ -0.56
SMIM12-201ENST00000417239 LDLRAD1Q5T700 205 aa11.54□□□□□ -0.56
SMIM12-201ENST00000417239 COPS6Q7L5N1 327 aa11.54□□□□□ -0.56
SMIM12-201ENST00000417239 IFNL1Q8IU54 200 aa11.54□□□□□ -0.56
SMIM12-201ENST00000417239 ZNF428Q96B54 188 aa11.54□□□□□ -0.56
SMIM12-201ENST00000417239 H0YGN5 161 aa11.53□□□□□ -0.56
SMIM12-201ENST00000417239 IGF2BP3O00425 579 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMIM12-201ENST00000417239 UFL1O94874 794 aa11.53□□□□□ -0.56
SMIM12-201ENST00000417239 EIF2S2P20042 333 aaKnown RBP11.53□□□□□ -0.56
SMIM12-201ENST00000417239 NF2P35240 595 aa11.53□□□□□ -0.56
SMIM12-201ENST00000417239 CAP1Q01518 475 aa11.53□□□□□ -0.56
SMIM12-201ENST00000417239 SLC17A8Q8NDX2 589 aa11.53□□□□□ -0.56
SMIM12-201ENST00000417239 CD99L2Q8TCZ2 262 aa11.53□□□□□ -0.56
SMIM12-201ENST00000417239 XAGE3Q8WTP9 111 aa11.53□□□□□ -0.56
SMIM12-201ENST00000417239 ERO1AQ96HE7 468 aa11.53□□□□□ -0.56
SMIM12-201ENST00000417239 SSC5DA1L4H1 1573 aa11.53□□□□□ -0.56
SMIM12-201ENST00000417239 COL1A1P02452 1464 aaPredicted RBP11.52□□□□□ -0.56
SMIM12-201ENST00000417239 MANSC4A6NHS7 340 aaPredicted RBP11.52□□□□□ -0.57
SMIM12-201ENST00000417239 G3V3G9 751 aa11.52□□□□□ -0.57
SMIM12-201ENST00000417239 RPS8P62241 208 aaKnown RBP11.52□□□□□ -0.57
SMIM12-201ENST00000417239 AIMP1Q12904 312 aaKnown RBP11.52□□□□□ -0.57
SMIM12-201ENST00000417239 DCAF8Q5TAQ9 597 aa11.52□□□□□ -0.57
SMIM12-201ENST00000417239 FAM89AQ96GI7 184 aa11.52□□□□□ -0.57
SMIM12-201ENST00000417239 ZNF333Q96JL9 665 aa11.52□□□□□ -0.57
SMIM12-201ENST00000417239 USP17L3A6NCW0 530 aa11.51□□□□□ -0.57
SMIM12-201ENST00000417239 USP17L4A6NCW7 530 aa11.51□□□□□ -0.57
SMIM12-201ENST00000417239 WNT10BO00744 389 aa11.51□□□□□ -0.57
SMIM12-201ENST00000417239 INHBEP58166 350 aa11.51□□□□□ -0.57
SMIM12-201ENST00000417239 PRKG1Q13976 671 aa11.51□□□□□ -0.57
SMIM12-201ENST00000417239 CHRDL2Q6WN34 429 aa11.51□□□□□ -0.57
SMIM12-201ENST00000417239 USP17L1Q7RTZ2 530 aa11.51□□□□□ -0.57
SMIM12-201ENST00000417239 ARMC9Q7Z3E5 817 aa11.51□□□□□ -0.57
SMIM12-201ENST00000417239 GGA1Q9UJY5 639 aa11.51□□□□□ -0.57
SMIM12-201ENST00000417239 ZBTB48P10074 688 aaPredicted RBP11.5□□□□□ -0.57
SMIM12-201ENST00000417239 CRHR2Q13324 411 aa11.5□□□□□ -0.57
SMIM12-201ENST00000417239 PLEKHF1Q96S99 279 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms