RNA–Protein interactions for RNA: ENST00000416982.1

LINC01287-201, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 2 BASIC

Gene LINC01287, Length 2,624 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-201ENST00000416982 WDR17Q8IZU2 1322 aa11.97□□□□□ -0.49
LINC01287-201ENST00000416982 CAMTA1Q9Y6Y1 1673 aa11.96□□□□□ -0.49
LINC01287-201ENST00000416982 PNMA6AP0CW24 399 aaPredicted RBP11.96□□□□□ -0.49
LINC01287-201ENST00000416982 TTC5Q8N0Z6 440 aa11.96□□□□□ -0.49
LINC01287-201ENST00000416982 CCAR2Q8N163 923 aaKnown RBP11.96□□□□□ -0.49
LINC01287-201ENST00000416982 DCAF5Q96JK2 942 aa11.96□□□□□ -0.49
LINC01287-201ENST00000416982 LSG1Q9H089 658 aaKnown RBP11.96□□□□□ -0.49
LINC01287-201ENST00000416982 EFCC1Q9HA90 598 aa11.96□□□□□ -0.49
LINC01287-201ENST00000416982 DDX19AQ9NUU7 478 aaKnown RBP11.96□□□□□ -0.49
LINC01287-201ENST00000416982 HYPKQ9NX55 129 aa11.96□□□□□ -0.49
LINC01287-201ENST00000416982 ADCY9O60503 1353 aa11.96□□□□□ -0.49
LINC01287-201ENST00000416982 NCAPD2Q15021 1401 aa11.96□□□□□ -0.49
LINC01287-201ENST00000416982 ADAMTS2O95450 1211 aa11.96□□□□□ -0.5
LINC01287-201ENST00000416982 CLCN6P51797 869 aa11.96□□□□□ -0.5
LINC01287-201ENST00000416982 COPS6Q7L5N1 327 aa11.96□□□□□ -0.5
LINC01287-201ENST00000416982 CCDC83Q8IWF9 413 aa11.96□□□□□ -0.5
LINC01287-201ENST00000416982 MRFAP1L1Q96HT8 127 aa11.96□□□□□ -0.5
LINC01287-201ENST00000416982 DACT1Q9NYF0 836 aa11.96□□□□□ -0.5
LINC01287-201ENST00000416982 SGSM2O43147 1006 aa11.95□□□□□ -0.5
LINC01287-201ENST00000416982 SRGAP3O43295 1099 aa11.95□□□□□ -0.5
LINC01287-201ENST00000416982 ZRANB2O95218 330 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC01287-201ENST00000416982 ZNF165P49910 485 aa11.95□□□□□ -0.5
LINC01287-201ENST00000416982 PIP4K2BP78356 416 aa11.95□□□□□ -0.5
LINC01287-201ENST00000416982 KRT85P78386 507 aa11.95□□□□□ -0.5
LINC01287-201ENST00000416982 ATP8B2P98198 1209 aa11.95□□□□□ -0.5
LINC01287-201ENST00000416982 KIF2AO00139 706 aaPredicted RBP11.95□□□□□ -0.5
LINC01287-201ENST00000416982 SKILP12757 684 aa11.95□□□□□ -0.5
LINC01287-201ENST00000416982 XAGE3Q8WTP9 111 aa11.95□□□□□ -0.5
LINC01287-201ENST00000416982 DNAJC25Q9H1X3 360 aa11.95□□□□□ -0.5
LINC01287-201ENST00000416982 C9orf78Q9NZ63 289 aaPredicted RBP11.95□□□□□ -0.5
LINC01287-201ENST00000416982 LRRC37A3O60309 1634 aa11.95□□□□□ -0.5
LINC01287-201ENST00000416982 CPDO75976 1380 aa11.94□□□□□ -0.5
LINC01287-201ENST00000416982 VPS37CA5D8V6 355 aaPredicted RBP11.94□□□□□ -0.5
LINC01287-201ENST00000416982 SURF6O75683 361 aaKnown RBP11.94□□□□□ -0.5
LINC01287-201ENST00000416982 CCDC93Q567U6 631 aa11.94□□□□□ -0.5
LINC01287-201ENST00000416982 CHMP3Q9Y3E7 222 aa11.94□□□□□ -0.5
LINC01287-201ENST00000416982 HOXB7P09629 217 aa11.94□□□□□ -0.5
LINC01287-201ENST00000416982 IQCB1Q15051 598 aa11.94□□□□□ -0.5
LINC01287-201ENST00000416982 ERCC6LQ2NKX8 1250 aa11.94□□□□□ -0.5
LINC01287-201ENST00000416982 RIC3Q7Z5B4 369 aa11.94□□□□□ -0.5
LINC01287-201ENST00000416982 TXLNBQ8N3L3 684 aa11.94□□□□□ -0.5
LINC01287-201ENST00000416982 LRRN4CLQ8ND94 238 aa11.94□□□□□ -0.5
LINC01287-201ENST00000416982 UBXN6Q9BZV1 441 aa11.94□□□□□ -0.5
LINC01287-201ENST00000416982 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.94□□□□□ -0.5
LINC01287-201ENST00000416982 KAT6BQ8WYB5 2073 aa11.94□□□□□ -0.5
LINC01287-201ENST00000416982 CCDC69A6NI79 296 aa11.93□□□□□ -0.5
LINC01287-201ENST00000416982 CAVIN2O95810 425 aa11.93□□□□□ -0.5
LINC01287-201ENST00000416982 IL2RBP14784 551 aa11.93□□□□□ -0.5
LINC01287-201ENST00000416982 KSR2Q6VAB6 950 aa11.93□□□□□ -0.5
LINC01287-201ENST00000416982 NUTM1Q86Y26 1132 aa11.93□□□□□ -0.5
LINC01287-201ENST00000416982 NEK11Q8NG66 645 aa11.93□□□□□ -0.5
LINC01287-201ENST00000416982 SH2B1Q9NRF2 756 aaPredicted RBP11.93□□□□□ -0.5
LINC01287-201ENST00000416982 PA2G4Q9UQ80 394 aaKnown RBP11.93□□□□□ -0.5
LINC01287-201ENST00000416982 ZNF330Q9Y3S2 320 aaPredicted RBP11.93□□□□□ -0.5
LINC01287-201ENST00000416982 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.93□□□□□ -0.5
LINC01287-201ENST00000416982 N4BP2Q86UW6 1770 aaPredicted RBP11.93□□□□□ -0.5
LINC01287-201ENST00000416982 HEG1Q9ULI3 1381 aa11.93□□□□□ -0.5
LINC01287-201ENST00000416982 NUTM2BA6NNL0 878 aaPredicted RBP11.93□□□□□ -0.5
LINC01287-201ENST00000416982 NUTM2EB1AL46 878 aaPredicted RBP11.93□□□□□ -0.5
LINC01287-201ENST00000416982 ATP5J2-PTCD1G3V325 749 aa11.93□□□□□ -0.5
LINC01287-201ENST00000416982 DTNBO60941 627 aa11.93□□□□□ -0.5
LINC01287-201ENST00000416982 CPA1P15085 419 aa11.93□□□□□ -0.5
LINC01287-201ENST00000416982 CERS3Q8IU89 383 aa11.93□□□□□ -0.5
LINC01287-201ENST00000416982 NUTM2AQ8IVF1 878 aaPredicted RBP11.93□□□□□ -0.5
LINC01287-201ENST00000416982 RGS22Q8NE09 1264 aa11.93□□□□□ -0.5
LINC01287-201ENST00000416982 ZSCAN31Q96LW9 406 aaPredicted RBP11.93□□□□□ -0.5
LINC01287-201ENST00000416982 YY1AP1Q9H869 796 aa11.93□□□□□ -0.5
LINC01287-201ENST00000416982 DDX21Q9NR30 783 aaKnown RBP eCLIP11.93□□□□□ -0.5
LINC01287-201ENST00000416982 PHRF1Q9P1Y6 1649 aaKnown RBP11.92□□□□□ -0.5
LINC01287-201ENST00000416982 A0A0G2JS52 829 aa11.92□□□□□ -0.5
LINC01287-201ENST00000416982 MAP4K4O95819 1239 aaPredicted RBP11.92□□□□□ -0.5
LINC01287-201ENST00000416982 NOP2P46087 812 aaKnown RBP11.92□□□□□ -0.5
LINC01287-201ENST00000416982 VPS53Q5VIR6 699 aa11.92□□□□□ -0.5
LINC01287-201ENST00000416982 TRMT1Q9NXH9 659 aaKnown RBP11.92□□□□□ -0.5
LINC01287-201ENST00000416982 A1BGP04217 495 aa11.92□□□□□ -0.5
LINC01287-201ENST00000416982 CASTP20810 708 aaKnown RBP11.92□□□□□ -0.5
LINC01287-201ENST00000416982 CDC37L1Q7L3B6 337 aa11.92□□□□□ -0.5
LINC01287-201ENST00000416982 KLHDC4Q8TBB5 520 aa11.92□□□□□ -0.5
LINC01287-201ENST00000416982 SOS1Q07889 1333 aaPredicted RBP11.92□□□□□ -0.5
LINC01287-201ENST00000416982 IGKV5-2P06315 115 aa11.91□□□□□ -0.5
LINC01287-201ENST00000416982 SNRPA1P09661 255 aaKnown RBP11.91□□□□□ -0.5
LINC01287-201ENST00000416982 CHRM1P11229 460 aaPredicted RBP11.91□□□□□ -0.5
LINC01287-201ENST00000416982 TEX35Q5T0J7 233 aa11.91□□□□□ -0.5
LINC01287-201ENST00000416982 SYT10Q6XYQ8 523 aa11.91□□□□□ -0.5
LINC01287-201ENST00000416982 RASSF4Q9H2L5 321 aa11.91□□□□□ -0.5
LINC01287-201ENST00000416982 RSPH14Q9UHP6 348 aa11.91□□□□□ -0.5
LINC01287-201ENST00000416982 COL18A1P39060 1754 aa11.91□□□□□ -0.5
LINC01287-201ENST00000416982 NPHP1O15259 732 aa11.91□□□□□ -0.5
LINC01287-201ENST00000416982 TPM4P67936 248 aa11.91□□□□□ -0.5
LINC01287-201ENST00000416982 FAM173BQ6P4H8 233 aa11.91□□□□□ -0.5
LINC01287-201ENST00000416982 SYTL4Q96C24 671 aaPredicted RBP11.91□□□□□ -0.5
LINC01287-201ENST00000416982 FMNL2Q96PY5 1086 aa11.91□□□□□ -0.5
LINC01287-201ENST00000416982 MYD88Q99836 296 aa11.91□□□□□ -0.5
LINC01287-201ENST00000416982 CARD10Q9BWT7 1032 aa11.91□□□□□ -0.5
LINC01287-201ENST00000416982 SCAND2PQ9GZW5 306 aaPredicted RBP11.91□□□□□ -0.5
LINC01287-201ENST00000416982 NR1I2O75469 434 aa11.9□□□□□ -0.5
LINC01287-201ENST00000416982 ME3Q16798 604 aa11.9□□□□□ -0.5
LINC01287-201ENST00000416982 TEX2Q8IWB9 1127 aa11.9□□□□□ -0.5
LINC01287-201ENST00000416982 PI4K2BQ8TCG2 481 aa11.9□□□□□ -0.5
LINC01287-201ENST00000416982 LEO1Q8WVC0 666 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms