RNA–Protein interactions for RNA: ENST00000416880.5

SEC22C-204, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-204ENST00000416880 DNAAF4Q8WXU2 420 aa17.48■□□□□ 0.39
SEC22C-204ENST00000416880 JARID2Q92833 1246 aaPredicted RBP17.48■□□□□ 0.39
SEC22C-204ENST00000416880 SALL2Q9Y467 1007 aaPredicted RBP17.48■□□□□ 0.39
SEC22C-204ENST00000416880 RTL9Q8NET4 1388 aa17.48■□□□□ 0.39
SEC22C-204ENST00000416880 XDHP47989 1333 aa17.47■□□□□ 0.39
SEC22C-204ENST00000416880 G3V3G9 751 aa17.47■□□□□ 0.39
SEC22C-204ENST00000416880 ECE2O60344 883 aa17.47■□□□□ 0.39
SEC22C-204ENST00000416880 HSPA1AP0DMV8 641 aaKnown RBP17.47■□□□□ 0.39
SEC22C-204ENST00000416880 HSPA1BP0DMV9 641 aaKnown RBP17.47■□□□□ 0.39
SEC22C-204ENST00000416880 ATP2B4P23634 1241 aa17.47■□□□□ 0.39
SEC22C-204ENST00000416880 EXOSC9Q06265 439 aaKnown RBP17.47■□□□□ 0.39
SEC22C-204ENST00000416880 GCKRQ14397 625 aa17.47■□□□□ 0.39
SEC22C-204ENST00000416880 CWF19L2Q2TBE0 894 aaKnown RBP17.47■□□□□ 0.39
SEC22C-204ENST00000416880 DCAF8Q5TAQ9 597 aa17.47■□□□□ 0.39
SEC22C-204ENST00000416880 PLA2G12BQ9BX93 195 aa17.47■□□□□ 0.39
SEC22C-204ENST00000416880 DBNDD1Q9H9R9 158 aa17.47■□□□□ 0.39
SEC22C-204ENST00000416880 BSDC1Q9NW68 430 aaPredicted RBP17.47■□□□□ 0.39
SEC22C-204ENST00000416880 PSMD14O00487 310 aa17.46■□□□□ 0.39
SEC22C-204ENST00000416880 UFL1O94874 794 aa17.46■□□□□ 0.39
SEC22C-204ENST00000416880 VEGFBP49765 207 aa17.46■□□□□ 0.39
SEC22C-204ENST00000416880 VIL1P09327 827 aaKnown RBP17.45■□□□□ 0.38
SEC22C-204ENST00000416880 DOK7Q18PE1 504 aa17.45■□□□□ 0.38
SEC22C-204ENST00000416880 CDC37L1Q7L3B6 337 aa17.45■□□□□ 0.38
SEC22C-204ENST00000416880 UBE3BQ7Z3V4 1068 aa17.45■□□□□ 0.38
SEC22C-204ENST00000416880 MICALL2Q8IY33 904 aa17.45■□□□□ 0.38
SEC22C-204ENST00000416880 CCDC85AQ96PX6 553 aaPredicted RBP17.45■□□□□ 0.38
SEC22C-204ENST00000416880 ABT1Q9ULW3 272 aaKnown RBP17.45■□□□□ 0.38
SEC22C-204ENST00000416880 HIRAP54198 1017 aaPredicted RBP17.44■□□□□ 0.38
SEC22C-204ENST00000416880 MYH3P11055 1940 aa17.44■□□□□ 0.38
SEC22C-204ENST00000416880 COL4A1P02462 1669 aa17.44■□□□□ 0.38
SEC22C-204ENST00000416880 CSF1RP07333 972 aa17.43■□□□□ 0.38
SEC22C-204ENST00000416880 ECE1P42892 770 aa17.43■□□□□ 0.38
SEC22C-204ENST00000416880 CST9Q5W186 159 aa17.43■□□□□ 0.38
SEC22C-204ENST00000416880 PODNQ7Z5L7 613 aa17.43■□□□□ 0.38
SEC22C-204ENST00000416880 GREM2Q9H772 168 aa17.43■□□□□ 0.38
SEC22C-204ENST00000416880 MINPP1Q9UNW1 487 aa17.43■□□□□ 0.38
SEC22C-204ENST00000416880 ZBTB12Q9Y330 459 aaPredicted RBP17.43■□□□□ 0.38
SEC22C-204ENST00000416880 TRPM7Q96QT4 1865 aa17.43■□□□□ 0.38
SEC22C-204ENST00000416880 PCNTO95613 3336 aa17.43■□□□□ 0.38
SEC22C-204ENST00000416880 IGHMBP2P38935 993 aaKnown RBP17.42■□□□□ 0.38
SEC22C-204ENST00000416880 CASP7P55210 303 aa17.42■□□□□ 0.38
SEC22C-204ENST00000416880 COL13A1Q5TAT6 717 aaPredicted RBP17.42■□□□□ 0.38
SEC22C-204ENST00000416880 AGBL3Q8NEM8 1001 aa17.42■□□□□ 0.38
SEC22C-204ENST00000416880 SPINK5Q9NQ38 1064 aaPredicted RBP17.42■□□□□ 0.38
SEC22C-204ENST00000416880 LEMD3Q9Y2U8 911 aa17.42■□□□□ 0.38
SEC22C-204ENST00000416880 WDR33Q9C0J8 1336 aaKnown RBP17.42■□□□□ 0.38
SEC22C-204ENST00000416880 TRAF5O00463 557 aa17.41■□□□□ 0.38
SEC22C-204ENST00000416880 MAP2K1Q02750 393 aaPredicted RBP17.41■□□□□ 0.38
SEC22C-204ENST00000416880 TRPM4Q8TD43 1214 aa17.41■□□□□ 0.38
SEC22C-204ENST00000416880 HHIPL1Q96JK4 782 aa17.41■□□□□ 0.38
SEC22C-204ENST00000416880 ANKRD2Q9GZV1 360 aa17.41■□□□□ 0.38
SEC22C-204ENST00000416880 KCNQ5Q9NR82 932 aa17.41■□□□□ 0.38
SEC22C-204ENST00000416880 TLL2Q9Y6L7 1015 aa17.41■□□□□ 0.38
SEC22C-204ENST00000416880 ZNF609O15014 1411 aa17.4■□□□□ 0.38
SEC22C-204ENST00000416880 BEND3Q5T5X7 828 aa17.4■□□□□ 0.38
SEC22C-204ENST00000416880 AIDAQ96BJ3 306 aa17.4■□□□□ 0.38
SEC22C-204ENST00000416880 GPR101Q96P66 508 aaPredicted RBP17.4■□□□□ 0.38
SEC22C-204ENST00000416880 GLIS2Q9BZE0 524 aaPredicted RBP17.4■□□□□ 0.38
SEC22C-204ENST00000416880 WBP1LQ9NX94 342 aa17.4■□□□□ 0.38
SEC22C-204ENST00000416880 ZNF521Q96K83 1311 aa17.4■□□□□ 0.38
SEC22C-204ENST00000416880 CELF2O95319 508 aaKnown RBP17.39■□□□□ 0.37
SEC22C-204ENST00000416880 ITGA6P23229 1130 aa17.39■□□□□ 0.37
SEC22C-204ENST00000416880 MMP14P50281 582 aa17.39■□□□□ 0.37
SEC22C-204ENST00000416880 CCT4P50991 539 aaKnown RBP17.39■□□□□ 0.37
SEC22C-204ENST00000416880 FMR1Q06787 632 aaKnown RBP eCLIP17.39■□□□□ 0.37
SEC22C-204ENST00000416880 RSBN1LQ6PCB5 846 aaPredicted RBP17.39■□□□□ 0.37
SEC22C-204ENST00000416880 SAMD7Q7Z3H4 446 aa17.39■□□□□ 0.37
SEC22C-204ENST00000416880 MPHOSPH8Q99549 860 aa17.39■□□□□ 0.37
SEC22C-204ENST00000416880 MED23Q9ULK4 1368 aa17.39■□□□□ 0.37
SEC22C-204ENST00000416880 SHTN1A0MZ66 631 aa17.38■□□□□ 0.37
SEC22C-204ENST00000416880 USP17L3A6NCW0 530 aa17.38■□□□□ 0.37
SEC22C-204ENST00000416880 USP17L4A6NCW7 530 aa17.38■□□□□ 0.37
SEC22C-204ENST00000416880 CTCFP49711 727 aaPredicted RBP17.38■□□□□ 0.37
SEC22C-204ENST00000416880 TBC1D10BQ4KMP7 808 aaPredicted RBP17.38■□□□□ 0.37
SEC22C-204ENST00000416880 USP17L1Q7RTZ2 530 aa17.38■□□□□ 0.37
SEC22C-204ENST00000416880 SAPCD2Q86UD0 394 aa17.38■□□□□ 0.37
SEC22C-204ENST00000416880 DCPSQ96C86 337 aaKnown RBP17.38■□□□□ 0.37
SEC22C-204ENST00000416880 CAPNS2Q96L46 248 aa17.38■□□□□ 0.37
SEC22C-204ENST00000416880 COA1Q9GZY4 146 aa17.38■□□□□ 0.37
SEC22C-204ENST00000416880 PRDM10Q9NQV6 1147 aa17.38■□□□□ 0.37
SEC22C-204ENST00000416880 ANKRD18BA2A2Z9 1011 aa17.37■□□□□ 0.37
SEC22C-204ENST00000416880 ALDH1L1O75891 902 aa17.37■□□□□ 0.37
SEC22C-204ENST00000416880 MAP2K2P36507 400 aa17.37■□□□□ 0.37
SEC22C-204ENST00000416880 ZNF280AP59817 542 aaPredicted RBP17.37■□□□□ 0.37
SEC22C-204ENST00000416880 TNS4Q8IZW8 715 aa17.37■□□□□ 0.37
SEC22C-204ENST00000416880 SCN9AQ15858 1988 aa17.37■□□□□ 0.37
SEC22C-204ENST00000416880 F6X3S4 739 aa17.36■□□□□ 0.37
SEC22C-204ENST00000416880 FOXN1O15353 648 aa17.36■□□□□ 0.37
SEC22C-204ENST00000416880 IFIT5Q13325 482 aaKnown RBP17.36■□□□□ 0.37
SEC22C-204ENST00000416880 KIF4BQ2VIQ3 1234 aa17.36■□□□□ 0.37
SEC22C-204ENST00000416880 KRT26Q7Z3Y9 468 aa17.36■□□□□ 0.37
SEC22C-204ENST00000416880 USP48Q86UV5 1035 aa17.36■□□□□ 0.37
SEC22C-204ENST00000416880 GMLQ99445 158 aa17.36■□□□□ 0.37
SEC22C-204ENST00000416880 E9PSI1 815 aa17.35■□□□□ 0.37
SEC22C-204ENST00000416880 GRM8O00222 908 aa17.35■□□□□ 0.37
SEC22C-204ENST00000416880 USP17L8P0C7I0 530 aa17.35■□□□□ 0.37
SEC22C-204ENST00000416880 FOXO4P98177 505 aa17.35■□□□□ 0.37
SEC22C-204ENST00000416880 FAM161AQ3B820 660 aa17.35■□□□□ 0.37
SEC22C-204ENST00000416880 RBM26Q5T8P6 1007 aaKnown RBP17.35■□□□□ 0.37
SEC22C-204ENST00000416880 ZNF804BA4D1E1 1349 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms