RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 GREM2Q9H772 168 aa22.84■■□□□ 1.25
CPNE1-210ENST00000416778 ANKIB1Q9P2G1 1089 aa22.84■■□□□ 1.25
CPNE1-210ENST00000416778 MKRN1Q9UHC7 482 aaKnown RBP22.84■■□□□ 1.25
CPNE1-210ENST00000416778 PGAP2Q9UHJ9 254 aa22.84■■□□□ 1.25
CPNE1-210ENST00000416778 CNOT7Q9UIV1 285 aaKnown RBP22.84■■□□□ 1.25
CPNE1-210ENST00000416778 HIRAP54198 1017 aaPredicted RBP22.83■■□□□ 1.25
CPNE1-210ENST00000416778 UBE3BQ7Z3V4 1068 aa22.83■■□□□ 1.25
CPNE1-210ENST00000416778 PLA2G12BQ9BX93 195 aa22.83■■□□□ 1.25
CPNE1-210ENST00000416778 PSMD14O00487 310 aa22.82■■□□□ 1.24
CPNE1-210ENST00000416778 CSF1RP07333 972 aa22.82■■□□□ 1.24
CPNE1-210ENST00000416778 DPF2Q92785 391 aa22.82■■□□□ 1.24
CPNE1-210ENST00000416778 CDC5LQ99459 802 aaKnown RBP22.82■■□□□ 1.24
CPNE1-210ENST00000416778 BSDC1Q9NW68 430 aaPredicted RBP22.82■■□□□ 1.24
CPNE1-210ENST00000416778 GGA1Q9UJY5 639 aa22.82■■□□□ 1.24
CPNE1-210ENST00000416778 ZBTB12Q9Y330 459 aaPredicted RBP22.82■■□□□ 1.24
CPNE1-210ENST00000416778 LRRC37AA6NMS7 1700 aa22.82■■□□□ 1.24
CPNE1-210ENST00000416778 WTIPA6NIX2 430 aaPredicted RBP22.81■■□□□ 1.24
CPNE1-210ENST00000416778 ECE2O60344 883 aa22.81■■□□□ 1.24
CPNE1-210ENST00000416778 FMR1Q06787 632 aaKnown RBP eCLIP22.81■■□□□ 1.247e-7■■■□□ 18.6
CPNE1-210ENST00000416778 MINPP1Q9UNW1 487 aa22.81■■□□□ 1.24
CPNE1-210ENST00000416778 SHTN1A0MZ66 631 aa22.8■■□□□ 1.24
CPNE1-210ENST00000416778 F6X3S4 739 aa22.8■■□□□ 1.24
CPNE1-210ENST00000416778 UFL1O94874 794 aa22.8■■□□□ 1.24
CPNE1-210ENST00000416778 BEND3Q5T5X7 828 aa22.8■■□□□ 1.24
CPNE1-210ENST00000416778 RTL9Q8NET4 1388 aa22.79■■□□□ 1.24
CPNE1-210ENST00000416778 H7C1D1 291 aa22.79■■□□□ 1.24
CPNE1-210ENST00000416778 ATP2B4P23634 1241 aa22.79■■□□□ 1.24
CPNE1-210ENST00000416778 ZC3H15Q8WU90 426 aaKnown RBP22.79■■□□□ 1.24
CPNE1-210ENST00000416778 XDHP47989 1333 aa22.79■■□□□ 1.24
CPNE1-210ENST00000416778 CNTNAP1P78357 1384 aa22.78■■□□□ 1.24
CPNE1-210ENST00000416778 VIL1P09327 827 aaKnown RBP22.78■■□□□ 1.24
CPNE1-210ENST00000416778 CST9Q5W186 159 aa22.78■■□□□ 1.24
CPNE1-210ENST00000416778 TRAF5O00463 557 aa22.77■■□□□ 1.24
CPNE1-210ENST00000416778 VEGFBP49765 207 aa22.77■■□□□ 1.24
CPNE1-210ENST00000416778 MICALL2Q8IY33 904 aa22.77■■□□□ 1.24
CPNE1-210ENST00000416778 TRPM4Q8TD43 1214 aa22.77■■□□□ 1.24
CPNE1-210ENST00000416778 RPS12P25398 132 aaKnown RBP22.76■■□□□ 1.23
CPNE1-210ENST00000416778 DEFB115Q30KQ5 88 aa22.76■■□□□ 1.23
CPNE1-210ENST00000416778 IFFO2Q5TF58 517 aa22.76■■□□□ 1.23
CPNE1-210ENST00000416778 RASSF10A6NK89 507 aa22.75■■□□□ 1.23
CPNE1-210ENST00000416778 G3V3G9 751 aa22.75■■□□□ 1.23
CPNE1-210ENST00000416778 ITGA6P23229 1130 aa22.75■■□□□ 1.23
CPNE1-210ENST00000416778 FOXO4P98177 505 aa22.75■■□□□ 1.23
CPNE1-210ENST00000416778 DCAF8Q5TAQ9 597 aa22.75■■□□□ 1.23
CPNE1-210ENST00000416778 SAMD7Q7Z3H4 446 aa22.75■■□□□ 1.23
CPNE1-210ENST00000416778 CACNA1FO60840 1977 aa22.73■■□□□ 1.23
CPNE1-210ENST00000416778 HSPA1AP0DMV8 641 aaKnown RBP22.73■■□□□ 1.23
CPNE1-210ENST00000416778 HSPA1BP0DMV9 641 aaKnown RBP22.73■■□□□ 1.23
CPNE1-210ENST00000416778 IGHMBP2P38935 993 aaKnown RBP22.73■■□□□ 1.23
CPNE1-210ENST00000416778 CCT4P50991 539 aaKnown RBP22.73■■□□□ 1.23
CPNE1-210ENST00000416778 PODNQ7Z5L7 613 aa22.73■■□□□ 1.23
CPNE1-210ENST00000416778 GLIS2Q9BZE0 524 aaPredicted RBP22.73■■□□□ 1.23
CPNE1-210ENST00000416778 EGFRP00533 1210 aa22.72■■□□□ 1.23
CPNE1-210ENST00000416778 SLFN5Q08AF3 891 aa22.72■■□□□ 1.23
CPNE1-210ENST00000416778 FAM161AQ3B820 660 aa22.72■■□□□ 1.23
CPNE1-210ENST00000416778 CDC37L1Q7L3B6 337 aa22.72■■□□□ 1.23
CPNE1-210ENST00000416778 LEMD3Q9Y2U8 911 aa22.72■■□□□ 1.23
CPNE1-210ENST00000416778 E9PSI1 815 aa22.71■■□□□ 1.23
CPNE1-210ENST00000416778 TBC1D10BQ4KMP7 808 aaPredicted RBP22.71■■□□□ 1.23
CPNE1-210ENST00000416778 COL13A1Q5TAT6 717 aaPredicted RBP22.71■■□□□ 1.23
CPNE1-210ENST00000416778 MRPL50Q8N5N7 158 aaKnown RBP22.71■■□□□ 1.23
CPNE1-210ENST00000416778 ABT1Q9ULW3 272 aaKnown RBP22.71■■□□□ 1.23
CPNE1-210ENST00000416778 ALDH1L1O75891 902 aa22.7■■□□□ 1.22
CPNE1-210ENST00000416778 EPHA10Q5JZY3 1008 aa22.7■■□□□ 1.22
CPNE1-210ENST00000416778 RBM26Q5T8P6 1007 aaKnown RBP22.7■■□□□ 1.22
CPNE1-210ENST00000416778 RSBN1LQ6PCB5 846 aaPredicted RBP22.7■■□□□ 1.22
CPNE1-210ENST00000416778 USP48Q86UV5 1035 aa22.7■■□□□ 1.22
CPNE1-210ENST00000416778 GMLQ99445 158 aa22.7■■□□□ 1.22
CPNE1-210ENST00000416778 MPHOSPH8Q99549 860 aa22.7■■□□□ 1.22
CPNE1-210ENST00000416778 ANKRD18BA2A2Z9 1011 aa22.69■■□□□ 1.22
CPNE1-210ENST00000416778 GRM8O00222 908 aa22.69■■□□□ 1.22
CPNE1-210ENST00000416778 TXNRD3Q86VQ6 643 aa22.69■■□□□ 1.22
CPNE1-210ENST00000416778 AGBL3Q8NEM8 1001 aa22.69■■□□□ 1.22
CPNE1-210ENST00000416778 ANKRD2Q9GZV1 360 aa22.69■■□□□ 1.22
CPNE1-210ENST00000416778 WDR33Q9C0J8 1336 aaKnown RBP22.68■■□□□ 1.22
CPNE1-210ENST00000416778 USP17L3A6NCW0 530 aa22.68■■□□□ 1.22
CPNE1-210ENST00000416778 USP17L4A6NCW7 530 aa22.68■■□□□ 1.22
CPNE1-210ENST00000416778 CCER2I3L3R5 266 aa22.68■■□□□ 1.22
CPNE1-210ENST00000416778 ZNF280AP59817 542 aaPredicted RBP22.68■■□□□ 1.22
CPNE1-210ENST00000416778 SLC4A10Q6U841 1118 aa22.68■■□□□ 1.22
CPNE1-210ENST00000416778 LMBR1LQ6UX01 489 aa22.68■■□□□ 1.22
CPNE1-210ENST00000416778 USP17L1Q7RTZ2 530 aa22.68■■□□□ 1.22
CPNE1-210ENST00000416778 TRMT2AQ8IZ69 625 aaKnown RBP22.68■■□□□ 1.22
CPNE1-210ENST00000416778 CDCA7LQ96GN5 454 aa22.68■■□□□ 1.22
CPNE1-210ENST00000416778 TLL2Q9Y6L7 1015 aa22.68■■□□□ 1.22
CPNE1-210ENST00000416778 MED23Q9ULK4 1368 aa22.67■■□□□ 1.22
CPNE1-210ENST00000416778 CELF2O95319 508 aaKnown RBP22.67■■□□□ 1.22
CPNE1-210ENST00000416778 IFIT5Q13325 482 aaKnown RBP22.67■■□□□ 1.22
CPNE1-210ENST00000416778 DLK2Q6UY11 383 aa22.67■■□□□ 1.22
CPNE1-210ENST00000416778 SRCIN1Q9C0H9 1055 aa22.67■■□□□ 1.22
CPNE1-210ENST00000416778 C9orf78Q9NZ63 289 aaPredicted RBP22.67■■□□□ 1.22
CPNE1-210ENST00000416778 ZNF804BA4D1E1 1349 aa22.66■■□□□ 1.22
CPNE1-210ENST00000416778 CHRNDQ07001 517 aa22.66■■□□□ 1.22
CPNE1-210ENST00000416778 COA1Q9GZY4 146 aa22.66■■□□□ 1.22
CPNE1-210ENST00000416778 SAPCD2Q86UD0 394 aa22.65■■□□□ 1.22
CPNE1-210ENST00000416778 SSH1Q8WYL5 1049 aa22.65■■□□□ 1.22
CPNE1-210ENST00000416778 KAZALD1Q96I82 304 aa22.65■■□□□ 1.22
CPNE1-210ENST00000416778 WBP1LQ9NX94 342 aa22.65■■□□□ 1.22
CPNE1-210ENST00000416778 SCN9AQ15858 1988 aa22.65■■□□□ 1.22
CPNE1-210ENST00000416778 USP17L8P0C7I0 530 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms