RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 DBNDD1Q9H9R9 158 aa17.19■□□□□ 0.34
LINC01398-201ENST00000416581 ANKIB1Q9P2G1 1089 aa17.19■□□□□ 0.34
LINC01398-201ENST00000416581 GGA1Q9UJY5 639 aa17.19■□□□□ 0.34
LINC01398-201ENST00000416581 PSMD14O00487 310 aa17.18■□□□□ 0.34
LINC01398-201ENST00000416581 BRPF1P55201 1214 aaPredicted RBP17.18■□□□□ 0.34
LINC01398-201ENST00000416581 NOGQ13253 232 aa17.18■□□□□ 0.34
LINC01398-201ENST00000416581 CCDC27Q2M243 656 aa17.18■□□□□ 0.34
LINC01398-201ENST00000416581 NCBP3Q53F19 620 aaKnown RBP17.18■□□□□ 0.34
LINC01398-201ENST00000416581 RTL5Q5HYW3 569 aaPredicted RBP17.18■□□□□ 0.34
LINC01398-201ENST00000416581 TRPM4Q8TD43 1214 aa17.18■□□□□ 0.34
LINC01398-201ENST00000416581 DCPSQ96C86 337 aaKnown RBP17.18■□□□□ 0.34
LINC01398-201ENST00000416581 POLLQ9UGP5 575 aa17.18■□□□□ 0.34
LINC01398-201ENST00000416581 XDHP47989 1333 aa17.18■□□□□ 0.34
LINC01398-201ENST00000416581 MYH3P11055 1940 aa17.17■□□□□ 0.34
LINC01398-201ENST00000416581 PSME4Q14997 1843 aa17.17■□□□□ 0.34
LINC01398-201ENST00000416581 RIMBP2O15034 1052 aa17.17■□□□□ 0.34
LINC01398-201ENST00000416581 UFL1O94874 794 aa17.17■□□□□ 0.34
LINC01398-201ENST00000416581 GRM1Q13255 1194 aa17.17■□□□□ 0.34
LINC01398-201ENST00000416581 ANKRD18AQ8IVF6 992 aa17.17■□□□□ 0.34
LINC01398-201ENST00000416581 PHAXQ9H814 394 aaKnown RBP17.17■□□□□ 0.34
LINC01398-201ENST00000416581 HIRAP54198 1017 aaPredicted RBP17.16■□□□□ 0.34
LINC01398-201ENST00000416581 KSR2Q6VAB6 950 aa17.16■□□□□ 0.34
LINC01398-201ENST00000416581 AGBL3Q8NEM8 1001 aa17.16■□□□□ 0.34
LINC01398-201ENST00000416581 ZNF408Q9H9D4 720 aa17.16■□□□□ 0.34
LINC01398-201ENST00000416581 PCDH10Q9P2E7 1040 aa17.16■□□□□ 0.34
LINC01398-201ENST00000416581 RTL9Q8NET4 1388 aa17.15■□□□□ 0.34
LINC01398-201ENST00000416581 CACNA1FO60840 1977 aa17.15■□□□□ 0.34
LINC01398-201ENST00000416581 ELL2O00472 640 aaPredicted RBP17.15■□□□□ 0.34
LINC01398-201ENST00000416581 VIL1P09327 827 aaKnown RBP17.15■□□□□ 0.34
LINC01398-201ENST00000416581 ATP2B4P23634 1241 aa17.15■□□□□ 0.34
LINC01398-201ENST00000416581 FMR1Q06787 632 aaKnown RBP eCLIP17.15■□□□□ 0.34
LINC01398-201ENST00000416581 KRT26Q7Z3Y9 468 aa17.15■□□□□ 0.34
LINC01398-201ENST00000416581 SULF1Q8IWU6 871 aa17.15■□□□□ 0.34
LINC01398-201ENST00000416581 ZBTB12Q9Y330 459 aaPredicted RBP17.15■□□□□ 0.34
LINC01398-201ENST00000416581 IL16Q14005 1332 aa17.15■□□□□ 0.34
LINC01398-201ENST00000416581 MMP14P50281 582 aa17.14■□□□□ 0.33
LINC01398-201ENST00000416581 KIF4BQ2VIQ3 1234 aa17.14■□□□□ 0.33
LINC01398-201ENST00000416581 C2orf69Q8N8R5 385 aa17.14■□□□□ 0.33
LINC01398-201ENST00000416581 C8orf58Q8NAV2 365 aa17.14■□□□□ 0.33
LINC01398-201ENST00000416581 CTSWP56202 376 aa17.13■□□□□ 0.33
LINC01398-201ENST00000416581 HUNKP57058 714 aa17.13■□□□□ 0.33
LINC01398-201ENST00000416581 DOK7Q18PE1 504 aa17.13■□□□□ 0.33
LINC01398-201ENST00000416581 TBC1D10BQ4KMP7 808 aaPredicted RBP17.13■□□□□ 0.33
LINC01398-201ENST00000416581 SAMD7Q7Z3H4 446 aa17.13■□□□□ 0.33
LINC01398-201ENST00000416581 PODNQ7Z5L7 613 aa17.13■□□□□ 0.33
LINC01398-201ENST00000416581 USP48Q86UV5 1035 aa17.13■□□□□ 0.33
LINC01398-201ENST00000416581 CCDC102AQ96A19 550 aa17.13■□□□□ 0.33
LINC01398-201ENST00000416581 SEC31BQ9NQW1 1179 aa17.13■□□□□ 0.33
LINC01398-201ENST00000416581 MAP3K2Q9Y2U5 619 aa17.13■□□□□ 0.33
LINC01398-201ENST00000416581 MED23Q9ULK4 1368 aa17.13■□□□□ 0.33
LINC01398-201ENST00000416581 RSBN1LQ6PCB5 846 aaPredicted RBP17.12■□□□□ 0.33
LINC01398-201ENST00000416581 REM2Q8IYK8 340 aaPredicted RBP17.12■□□□□ 0.33
LINC01398-201ENST00000416581 ZNF428Q96B54 188 aa17.12■□□□□ 0.33
LINC01398-201ENST00000416581 GBA2Q9HCG7 927 aaPredicted RBP17.12■□□□□ 0.33
LINC01398-201ENST00000416581 MYO3BQ8WXR4 1341 aa17.12■□□□□ 0.33
LINC01398-201ENST00000416581 SCN9AQ15858 1988 aa17.11■□□□□ 0.33
LINC01398-201ENST00000416581 PI4KAP2A4QPH2 592 aa17.11■□□□□ 0.33
LINC01398-201ENST00000416581 FKBP1BP68106 108 aa17.11■□□□□ 0.33
LINC01398-201ENST00000416581 TWISTNBQ3B726 338 aaPredicted RBP17.11■□□□□ 0.33
LINC01398-201ENST00000416581 RGMBQ6NW40 437 aa17.11■□□□□ 0.33
LINC01398-201ENST00000416581 PI4KAP1Q8N8J0 262 aa17.11■□□□□ 0.33
LINC01398-201ENST00000416581 ABHD8Q96I13 439 aa17.11■□□□□ 0.33
LINC01398-201ENST00000416581 MYH16Q9H6N6 1097 aa17.11■□□□□ 0.33
LINC01398-201ENST00000416581 PITPNM2Q9BZ72 1349 aa17.11■□□□□ 0.33
LINC01398-201ENST00000416581 COL4A1P02462 1669 aa17.1■□□□□ 0.33
LINC01398-201ENST00000416581 ZNF280AP59817 542 aaPredicted RBP17.1■□□□□ 0.33
LINC01398-201ENST00000416581 BSDC1Q9NW68 430 aaPredicted RBP17.1■□□□□ 0.33
LINC01398-201ENST00000416581 GGA3Q9NZ52 723 aa17.1■□□□□ 0.33
LINC01398-201ENST00000416581 SHTN1A0MZ66 631 aa17.09■□□□□ 0.33
LINC01398-201ENST00000416581 USP17L3A6NCW0 530 aa17.09■□□□□ 0.33
LINC01398-201ENST00000416581 USP17L4A6NCW7 530 aa17.09■□□□□ 0.33
LINC01398-201ENST00000416581 AOC2O75106 756 aa17.09■□□□□ 0.33
LINC01398-201ENST00000416581 IGHMBP2P38935 993 aaKnown RBP17.09■□□□□ 0.33
LINC01398-201ENST00000416581 USP17L1Q7RTZ2 530 aa17.09■□□□□ 0.33
LINC01398-201ENST00000416581 WWC1Q8IX03 1113 aa17.09■□□□□ 0.33
LINC01398-201ENST00000416581 SAGE1Q9NXZ1 904 aa17.09■□□□□ 0.33
LINC01398-201ENST00000416581 POLR2AP24928 1970 aaKnown RBP17.08■□□□□ 0.33
LINC01398-201ENST00000416581 USP17L8P0C7I0 530 aa17.08■□□□□ 0.32
LINC01398-201ENST00000416581 RBM26Q5T8P6 1007 aaKnown RBP17.08■□□□□ 0.32
LINC01398-201ENST00000416581 OGFOD1Q8N543 542 aa17.08■□□□□ 0.32
LINC01398-201ENST00000416581 TTLL11Q8NHH1 800 aa17.08■□□□□ 0.32
LINC01398-201ENST00000416581 LEMD3Q9Y2U8 911 aa17.08■□□□□ 0.32
LINC01398-201ENST00000416581 PAPPA2Q9BXP8 1791 aa17.07■□□□□ 0.32
LINC01398-201ENST00000416581 NEURL1BA8MQ27 555 aa17.07■□□□□ 0.32
LINC01398-201ENST00000416581 IGKV5-2P06315 115 aa17.07■□□□□ 0.32
LINC01398-201ENST00000416581 TSPYL6Q8N831 410 aa17.07■□□□□ 0.32
LINC01398-201ENST00000416581 PLA2G12BQ9BX93 195 aa17.07■□□□□ 0.32
LINC01398-201ENST00000416581 ANKRD2Q9GZV1 360 aa17.07■□□□□ 0.32
LINC01398-201ENST00000416581 COA1Q9GZY4 146 aa17.07■□□□□ 0.32
LINC01398-201ENST00000416581 SPEF2Q9C093 1822 aa17.06■□□□□ 0.32
LINC01398-201ENST00000416581 ADM5C9JUS6 153 aa17.06■□□□□ 0.32
LINC01398-201ENST00000416581 SLC4A2P04920 1241 aa17.06■□□□□ 0.32
LINC01398-201ENST00000416581 ZNF157P51786 506 aaPredicted RBP17.06■□□□□ 0.32
LINC01398-201ENST00000416581 TSR2Q969E8 191 aaKnown RBP17.06■□□□□ 0.32
LINC01398-201ENST00000416581 CCDC85AQ96PX6 553 aaPredicted RBP17.06■□□□□ 0.32
LINC01398-201ENST00000416581 MYOZ2Q9NPC6 264 aa17.06■□□□□ 0.32
LINC01398-201ENST00000416581 AKAP11Q9UKA4 1901 aa17.06■□□□□ 0.32
LINC01398-201ENST00000416581 EGFRP00533 1210 aa17.05■□□□□ 0.32
LINC01398-201ENST00000416581 CCT4P50991 539 aaKnown RBP17.05■□□□□ 0.32
LINC01398-201ENST00000416581 FLIIQ13045 1269 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms