RNA–Protein interactions for RNA: ENST00000416519.1

TUBBP6-201, Transcript of tubulin beta class I pseudogene 6, humanhuman

BASIC

Gene TUBBP6, Length 1,332 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP6-201ENST00000416519 ECE2O60344 883 aa13.18□□□□□ -0.3
TUBBP6-201ENST00000416519 ALDH1L1O75891 902 aa13.18□□□□□ -0.3
TUBBP6-201ENST00000416519 UFL1O94874 794 aa13.18□□□□□ -0.3
TUBBP6-201ENST00000416519 CSF1RP07333 972 aa13.18□□□□□ -0.3
TUBBP6-201ENST00000416519 HTRA3P83110 453 aa13.18□□□□□ -0.3
TUBBP6-201ENST00000416519 MAP1SQ66K74 1059 aaPredicted RBP13.18□□□□□ -0.3
TUBBP6-201ENST00000416519 LEMD3Q9Y2U8 911 aa13.18□□□□□ -0.3
TUBBP6-201ENST00000416519 ZNF521Q96K83 1311 aa13.18□□□□□ -0.3
TUBBP6-201ENST00000416519 RIMBP2O15034 1052 aa13.17□□□□□ -0.3
TUBBP6-201ENST00000416519 VIL1P09327 827 aaKnown RBP13.17□□□□□ -0.3
TUBBP6-201ENST00000416519 CDC37L1Q7L3B6 337 aa13.17□□□□□ -0.3
TUBBP6-201ENST00000416519 AGBL3Q8NEM8 1001 aa13.17□□□□□ -0.3
TUBBP6-201ENST00000416519 MPHOSPH8Q99549 860 aa13.17□□□□□ -0.3
TUBBP6-201ENST00000416519 MINPP1Q9UNW1 487 aa13.17□□□□□ -0.3
TUBBP6-201ENST00000416519 DDX60Q8IY21 1712 aaKnown RBP13.17□□□□□ -0.3
TUBBP6-201ENST00000416519 RASSF10A6NK89 507 aa13.16□□□□□ -0.3
TUBBP6-201ENST00000416519 YDJCA8MPS7 323 aa13.16□□□□□ -0.3
TUBBP6-201ENST00000416519 PSMD14O00487 310 aa13.16□□□□□ -0.3
TUBBP6-201ENST00000416519 CT47B1P0C2W7 299 aaPredicted RBP13.16□□□□□ -0.3
TUBBP6-201ENST00000416519 DEFB115Q30KQ5 88 aa13.16□□□□□ -0.3
TUBBP6-201ENST00000416519 BEND3Q5T5X7 828 aa13.16□□□□□ -0.3
TUBBP6-201ENST00000416519 DBNDD1Q9H9R9 158 aa13.16□□□□□ -0.3
TUBBP6-201ENST00000416519 CACNA1FO60840 1977 aa13.16□□□□□ -0.3
TUBBP6-201ENST00000416519 COL4A5P29400 1685 aa13.16□□□□□ -0.3
TUBBP6-201ENST00000416519 CNTNAP1P78357 1384 aa13.16□□□□□ -0.3
TUBBP6-201ENST00000416519 LAMB2P55268 1798 aa13.16□□□□□ -0.3
TUBBP6-201ENST00000416519 LRRC37AA6NMS7 1700 aa13.16□□□□□ -0.3
TUBBP6-201ENST00000416519 ANKRD18BA2A2Z9 1011 aa13.15□□□□□ -0.3
TUBBP6-201ENST00000416519 ITGA6P23229 1130 aa13.15□□□□□ -0.3
TUBBP6-201ENST00000416519 ECE1P42892 770 aa13.15□□□□□ -0.3
TUBBP6-201ENST00000416519 CCT4P50991 539 aaKnown RBP13.15□□□□□ -0.3
TUBBP6-201ENST00000416519 IFIT5Q13325 482 aaKnown RBP13.15□□□□□ -0.3
TUBBP6-201ENST00000416519 SRCIN1Q9C0H9 1055 aa13.15□□□□□ -0.3
TUBBP6-201ENST00000416519 GREM2Q9H772 168 aa13.15□□□□□ -0.3
TUBBP6-201ENST00000416519 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
TUBBP6-201ENST00000416519 C9orf78Q9NZ63 289 aaPredicted RBP13.15□□□□□ -0.3
TUBBP6-201ENST00000416519 PTPRCP08575 1304 aa13.15□□□□□ -0.3
TUBBP6-201ENST00000416519 CASP7P55210 303 aa13.14□□□□□ -0.31
TUBBP6-201ENST00000416519 DOK7Q18PE1 504 aa13.14□□□□□ -0.31
TUBBP6-201ENST00000416519 IFFO2Q5TF58 517 aa13.14□□□□□ -0.31
TUBBP6-201ENST00000416519 MICALL2Q8IY33 904 aa13.14□□□□□ -0.31
TUBBP6-201ENST00000416519 JARID2Q92833 1246 aaPredicted RBP13.14□□□□□ -0.31
TUBBP6-201ENST00000416519 HHIPL1Q96JK4 782 aa13.14□□□□□ -0.31
TUBBP6-201ENST00000416519 CCDC85AQ96PX6 553 aaPredicted RBP13.14□□□□□ -0.31
TUBBP6-201ENST00000416519 COA1Q9GZY4 146 aa13.14□□□□□ -0.31
TUBBP6-201ENST00000416519 MKRN1Q9UHC7 482 aaKnown RBP13.14□□□□□ -0.31
TUBBP6-201ENST00000416519 MED23Q9ULK4 1368 aa13.14□□□□□ -0.31
TUBBP6-201ENST00000416519 MYO3BQ8WXR4 1341 aa13.14□□□□□ -0.31
TUBBP6-201ENST00000416519 ZNF609O15014 1411 aa13.14□□□□□ -0.31
TUBBP6-201ENST00000416519 USP17L3A6NCW0 530 aa13.13□□□□□ -0.31
TUBBP6-201ENST00000416519 USP17L4A6NCW7 530 aa13.13□□□□□ -0.31
TUBBP6-201ENST00000416519 GRM8O00222 908 aa13.13□□□□□ -0.31
TUBBP6-201ENST00000416519 MAP2K1Q02750 393 aaPredicted RBP13.13□□□□□ -0.31
TUBBP6-201ENST00000416519 CCDC57Q2TAC2 916 aa13.13□□□□□ -0.31
TUBBP6-201ENST00000416519 ALDH1L2Q3SY69 923 aa13.13□□□□□ -0.31
TUBBP6-201ENST00000416519 RSBN1LQ6PCB5 846 aaPredicted RBP13.13□□□□□ -0.31
TUBBP6-201ENST00000416519 USP17L1Q7RTZ2 530 aa13.13□□□□□ -0.31
TUBBP6-201ENST00000416519 SLC51AQ86UW1 340 aa13.13□□□□□ -0.31
TUBBP6-201ENST00000416519 DCPSQ96C86 337 aaKnown RBP13.13□□□□□ -0.31
TUBBP6-201ENST00000416519 ABT1Q9ULW3 272 aaKnown RBP13.13□□□□□ -0.31
TUBBP6-201ENST00000416519 ADAMTSL1Q8N6G6 1762 aa13.13□□□□□ -0.31
TUBBP6-201ENST00000416519 DUOX1Q9NRD9 1551 aa13.13□□□□□ -0.31
TUBBP6-201ENST00000416519 SLFN5Q08AF3 891 aa13.13□□□□□ -0.31
TUBBP6-201ENST00000416519 OGFOD1Q8N543 542 aa13.13□□□□□ -0.31
TUBBP6-201ENST00000416519 AIDAQ96BJ3 306 aa13.13□□□□□ -0.31
TUBBP6-201ENST00000416519 HDAC5Q9UQL6 1122 aa13.13□□□□□ -0.31
TUBBP6-201ENST00000416519 KCNJ4P48050 445 aa13.12□□□□□ -0.31
TUBBP6-201ENST00000416519 VEGFBP49765 207 aa13.12□□□□□ -0.31
TUBBP6-201ENST00000416519 STRIP1Q5VSL9 837 aa13.12□□□□□ -0.31
TUBBP6-201ENST00000416519 C15orf52Q6ZUT6 534 aaKnown RBP13.12□□□□□ -0.31
TUBBP6-201ENST00000416519 ZBTB12Q9Y330 459 aaPredicted RBP13.12□□□□□ -0.31
TUBBP6-201ENST00000416519 TLL2Q9Y6L7 1015 aa13.12□□□□□ -0.31
TUBBP6-201ENST00000416519 ZNF804BA4D1E1 1349 aa13.11□□□□□ -0.31
TUBBP6-201ENST00000416519 F6X3S4 739 aa13.11□□□□□ -0.31
TUBBP6-201ENST00000416519 USP17L8P0C7I0 530 aa13.11□□□□□ -0.31
TUBBP6-201ENST00000416519 HSPA1AP0DMV8 641 aaKnown RBP13.11□□□□□ -0.31
TUBBP6-201ENST00000416519 HSPA1BP0DMV9 641 aaKnown RBP13.11□□□□□ -0.31
TUBBP6-201ENST00000416519 MAP2K2P36507 400 aa13.11□□□□□ -0.31
TUBBP6-201ENST00000416519 HIRAP54198 1017 aaPredicted RBP13.11□□□□□ -0.31
TUBBP6-201ENST00000416519 ZNF280AP59817 542 aaPredicted RBP13.11□□□□□ -0.31
TUBBP6-201ENST00000416519 FOXO4P98177 505 aa13.11□□□□□ -0.31
TUBBP6-201ENST00000416519 TAF7LQ5H9L4 462 aa13.11□□□□□ -0.31
TUBBP6-201ENST00000416519 SLC4A10Q6U841 1118 aa13.11□□□□□ -0.31
TUBBP6-201ENST00000416519 WDR33Q9C0J8 1336 aaKnown RBP13.1□□□□□ -0.31
TUBBP6-201ENST00000416519 CELF2O95319 508 aaKnown RBP13.1□□□□□ -0.31
TUBBP6-201ENST00000416519 KIF4BQ2VIQ3 1234 aa13.1□□□□□ -0.31
TUBBP6-201ENST00000416519 FAM161AQ3B820 660 aa13.1□□□□□ -0.31
TUBBP6-201ENST00000416519 CST9Q5W186 159 aa13.1□□□□□ -0.31
TUBBP6-201ENST00000416519 LMBR1LQ6UX01 489 aa13.1□□□□□ -0.31
TUBBP6-201ENST00000416519 LDHAL6AQ6ZMR3 332 aa13.1□□□□□ -0.31
TUBBP6-201ENST00000416519 KRT26Q7Z3Y9 468 aa13.1□□□□□ -0.31
TUBBP6-201ENST00000416519 SULF1Q8IWU6 871 aa13.1□□□□□ -0.31
TUBBP6-201ENST00000416519 MRPL50Q8N5N7 158 aaKnown RBP13.1□□□□□ -0.31
TUBBP6-201ENST00000416519 TRPM4Q8TD43 1214 aa13.1□□□□□ -0.31
TUBBP6-201ENST00000416519 BEGAINQ9BUH8 593 aa13.1□□□□□ -0.31
TUBBP6-201ENST00000416519 UTYO14607 1347 aa13.09□□□□□ -0.31
TUBBP6-201ENST00000416519 BRPF1P55201 1214 aaPredicted RBP13.09□□□□□ -0.31
TUBBP6-201ENST00000416519 CHRNDQ07001 517 aa13.09□□□□□ -0.31
TUBBP6-201ENST00000416519 TBC1D10BQ4KMP7 808 aaPredicted RBP13.09□□□□□ -0.31
TUBBP6-201ENST00000416519 SAMD7Q7Z3H4 446 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms