RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 DNAAF4Q8WXU2 420 aa26.06■■□□□ 1.76
PTPRU-203ENST00000415600 DPF2Q92785 391 aa26.06■■□□□ 1.76
PTPRU-203ENST00000415600 CCDC85AQ96PX6 553 aaPredicted RBP26.06■■□□□ 1.76
PTPRU-203ENST00000415600 DBNDD1Q9H9R9 158 aa26.06■■□□□ 1.76
PTPRU-203ENST00000415600 LTBP1Q14766 1721 aa26.06■■□□□ 1.76
PTPRU-203ENST00000415600 XDHP47989 1333 aa26.06■■□□□ 1.76
PTPRU-203ENST00000415600 ZBED9Q6R2W3 1325 aa26.06■■□□□ 1.76
PTPRU-203ENST00000415600 YDJCA8MPS7 323 aa26.05■■□□□ 1.76
PTPRU-203ENST00000415600 ECE2O60344 883 aa26.05■■□□□ 1.76
PTPRU-203ENST00000415600 HSPA1AP0DMV8 641 aaKnown RBP26.05■■□□□ 1.76
PTPRU-203ENST00000415600 HSPA1BP0DMV9 641 aaKnown RBP26.05■■□□□ 1.76
PTPRU-203ENST00000415600 CWF19L2Q2TBE0 894 aaKnown RBP26.05■■□□□ 1.76
PTPRU-203ENST00000415600 G2E3Q7L622 706 aa26.05■■□□□ 1.76
PTPRU-203ENST00000415600 CNOT7Q9UIV1 285 aaKnown RBP26.05■■□□□ 1.76
PTPRU-203ENST00000415600 VAMP4O75379 141 aa26.04■■□□□ 1.76
PTPRU-203ENST00000415600 EXOSC9Q06265 439 aaKnown RBP26.04■■□□□ 1.76
PTPRU-203ENST00000415600 CACNA1FO60840 1977 aa26.04■■□□□ 1.76
PTPRU-203ENST00000415600 UBE3BQ7Z3V4 1068 aa26.03■■□□□ 1.76
PTPRU-203ENST00000415600 LINS1Q8NG48 757 aa26.03■■□□□ 1.76
PTPRU-203ENST00000415600 DEFB115Q30KQ5 88 aa26.03■■□□□ 1.76
PTPRU-203ENST00000415600 TTLL11Q8NHH1 800 aa26.03■■□□□ 1.76
PTPRU-203ENST00000415600 RTL9Q8NET4 1388 aa26.03■■□□□ 1.76
PTPRU-203ENST00000415600 RASSF10A6NK89 507 aa26.02■■□□□ 1.76
PTPRU-203ENST00000415600 PSMD14O00487 310 aa26.02■■□□□ 1.76
PTPRU-203ENST00000415600 ATP2B4P23634 1241 aa26.02■■□□□ 1.76
PTPRU-203ENST00000415600 GCKRQ14397 625 aa26.02■■□□□ 1.76
PTPRU-203ENST00000415600 DOK7Q18PE1 504 aa26.02■■□□□ 1.76
PTPRU-203ENST00000415600 MICALL2Q8IY33 904 aa26.02■■□□□ 1.76
PTPRU-203ENST00000415600 H7C1W4 665 aa26.01■■□□□ 1.75
PTPRU-203ENST00000415600 IGHMBP2P38935 993 aaKnown RBP26.01■■□□□ 1.75
PTPRU-203ENST00000415600 AIDAQ96BJ3 306 aa26.01■■□□□ 1.75
PTPRU-203ENST00000415600 BSDC1Q9NW68 430 aaPredicted RBP26.01■■□□□ 1.75
PTPRU-203ENST00000415600 PCNTO95613 3336 aa26■■□□□ 1.75
PTPRU-203ENST00000415600 VEGFBP49765 207 aa25.99■■□□□ 1.75
PTPRU-203ENST00000415600 PLA2G12BQ9BX93 195 aa25.99■■□□□ 1.75
PTPRU-203ENST00000415600 PGAP2Q9UHJ9 254 aa25.99■■□□□ 1.75
PTPRU-203ENST00000415600 ECE1P42892 770 aa25.99■■□□□ 1.75
PTPRU-203ENST00000415600 GREM2Q9H772 168 aa25.99■■□□□ 1.75
PTPRU-203ENST00000415600 CDC37L1Q7L3B6 337 aa25.98■■□□□ 1.75
PTPRU-203ENST00000415600 ZBTB12Q9Y330 459 aaPredicted RBP25.98■■□□□ 1.75
PTPRU-203ENST00000415600 GPR101Q96P66 508 aaPredicted RBP25.97■■□□□ 1.75
PTPRU-203ENST00000415600 MPHOSPH8Q99549 860 aa25.97■■□□□ 1.75
PTPRU-203ENST00000415600 MYH3P11055 1940 aa25.97■■□□□ 1.75
PTPRU-203ENST00000415600 PAXIP1Q6ZW49 1069 aaPredicted RBP25.96■■□□□ 1.75
PTPRU-203ENST00000415600 TRAF5O00463 557 aa25.95■■□□□ 1.75
PTPRU-203ENST00000415600 VIL1P09327 827 aaKnown RBP25.95■■□□□ 1.75
PTPRU-203ENST00000415600 PODNQ7Z5L7 613 aa25.95■■□□□ 1.75
PTPRU-203ENST00000415600 TRPM4Q8TD43 1214 aa25.95■■□□□ 1.75
PTPRU-203ENST00000415600 ANKRD2Q9GZV1 360 aa25.95■■□□□ 1.75
PTPRU-203ENST00000415600 COL4A1P02462 1669 aa25.95■■□□□ 1.74
PTPRU-203ENST00000415600 MINPP1Q9UNW1 487 aa25.95■■□□□ 1.74
PTPRU-203ENST00000415600 CELF2O95319 508 aaKnown RBP25.94■■□□□ 1.74
PTPRU-203ENST00000415600 ITGA6P23229 1130 aa25.94■■□□□ 1.74
PTPRU-203ENST00000415600 MAP2K1Q02750 393 aaPredicted RBP25.94■■□□□ 1.74
PTPRU-203ENST00000415600 AGBL3Q8NEM8 1001 aa25.94■■□□□ 1.74
PTPRU-203ENST00000415600 WDR33Q9C0J8 1336 aaKnown RBP25.93■■□□□ 1.74
PTPRU-203ENST00000415600 HIRAP54198 1017 aaPredicted RBP25.93■■□□□ 1.74
PTPRU-203ENST00000415600 COL13A1Q5TAT6 717 aaPredicted RBP25.93■■□□□ 1.74
PTPRU-203ENST00000415600 GLIS2Q9BZE0 524 aaPredicted RBP25.93■■□□□ 1.74
PTPRU-203ENST00000415600 SPINK5Q9NQ38 1064 aaPredicted RBP25.93■■□□□ 1.74
PTPRU-203ENST00000415600 LEMD3Q9Y2U8 911 aa25.93■■□□□ 1.74
PTPRU-203ENST00000415600 TBC1D10BQ4KMP7 808 aaPredicted RBP25.92■■□□□ 1.74
PTPRU-203ENST00000415600 SAMD7Q7Z3H4 446 aa25.92■■□□□ 1.74
PTPRU-203ENST00000415600 DCPSQ96C86 337 aaKnown RBP25.92■■□□□ 1.74
PTPRU-203ENST00000415600 TLL2Q9Y6L7 1015 aa25.92■■□□□ 1.74
PTPRU-203ENST00000415600 MED23Q9ULK4 1368 aa25.92■■□□□ 1.74
PTPRU-203ENST00000415600 TRPM7Q96QT4 1865 aa25.92■■□□□ 1.74
PTPRU-203ENST00000415600 ANKRD18BA2A2Z9 1011 aa25.91■■□□□ 1.74
PTPRU-203ENST00000415600 CCT4P50991 539 aaKnown RBP25.91■■□□□ 1.74
PTPRU-203ENST00000415600 CST9Q5W186 159 aa25.91■■□□□ 1.74
PTPRU-203ENST00000415600 RSBN1LQ6PCB5 846 aaPredicted RBP25.91■■□□□ 1.74
PTPRU-203ENST00000415600 TNS4Q8IZW8 715 aa25.91■■□□□ 1.74
PTPRU-203ENST00000415600 KCNQ5Q9NR82 932 aa25.91■■□□□ 1.74
PTPRU-203ENST00000415600 USP17L3A6NCW0 530 aa25.9■■□□□ 1.74
PTPRU-203ENST00000415600 USP17L4A6NCW7 530 aa25.9■■□□□ 1.74
PTPRU-203ENST00000415600 CSF1RP07333 972 aa25.9■■□□□ 1.74
PTPRU-203ENST00000415600 FAM161AQ3B820 660 aa25.9■■□□□ 1.74
PTPRU-203ENST00000415600 USP17L1Q7RTZ2 530 aa25.9■■□□□ 1.74
PTPRU-203ENST00000415600 KCNJ4P48050 445 aa25.9■■□□□ 1.74
PTPRU-203ENST00000415600 CTCFP49711 727 aaPredicted RBP25.9■■□□□ 1.74
PTPRU-203ENST00000415600 CASP7P55210 303 aa25.9■■□□□ 1.74
PTPRU-203ENST00000415600 KIF4BQ2VIQ3 1234 aa25.9■■□□□ 1.74
PTPRU-203ENST00000415600 BEND3Q5T5X7 828 aa25.9■■□□□ 1.74
PTPRU-203ENST00000415600 RBM26Q5T8P6 1007 aaKnown RBP25.9■■□□□ 1.74
PTPRU-203ENST00000415600 CAPNS2Q96L46 248 aa25.9■■□□□ 1.74
PTPRU-203ENST00000415600 BEGAINQ9BUH8 593 aa25.9■■□□□ 1.74
PTPRU-203ENST00000415600 ZNF609O15014 1411 aa25.89■■□□□ 1.74
PTPRU-203ENST00000415600 SHTN1A0MZ66 631 aa25.89■■□□□ 1.73
PTPRU-203ENST00000415600 F6X3S4 739 aa25.89■■□□□ 1.73
PTPRU-203ENST00000415600 IFIT5Q13325 482 aaKnown RBP25.89■■□□□ 1.73
PTPRU-203ENST00000415600 KRT26Q7Z3Y9 468 aa25.89■■□□□ 1.73
PTPRU-203ENST00000415600 ZNF408Q9H9D4 720 aa25.89■■□□□ 1.73
PTPRU-203ENST00000415600 C9orf78Q9NZ63 289 aaPredicted RBP25.89■■□□□ 1.73
PTPRU-203ENST00000415600 E9PSI1 815 aa25.88■■□□□ 1.73
PTPRU-203ENST00000415600 FMR1Q06787 632 aaKnown RBP eCLIP25.88■■□□□ 1.73
PTPRU-203ENST00000415600 USP48Q86UV5 1035 aa25.88■■□□□ 1.73
PTPRU-203ENST00000415600 HHIPL1Q96JK4 782 aa25.88■■□□□ 1.73
PTPRU-203ENST00000415600 COA1Q9GZY4 146 aa25.88■■□□□ 1.73
PTPRU-203ENST00000415600 CHMP3Q9Y3E7 222 aa25.88■■□□□ 1.73
PTPRU-203ENST00000415600 ALDH1L1O75891 902 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms