RNA–Protein interactions for RNA: ENST00000415569.5

GTDC1-208, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5

Gene GTDC1, Length 2,780 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-208ENST00000415569 SYNE4Q8N205 404 aa5.38□□□□□ -1.55
GTDC1-208ENST00000415569 ACSBG1Q96GR2 724 aa5.38□□□□□ -1.55
GTDC1-208ENST00000415569 SLKQ9H2G2 1235 aaPredicted RBP5.38□□□□□ -1.55
GTDC1-208ENST00000415569 CRKLP46109 303 aaKnown RBP5.38□□□□□ -1.55
GTDC1-208ENST00000415569 FAM98CQ17RN3 349 aaKnown RBP5.38□□□□□ -1.55
GTDC1-208ENST00000415569 LRRC24Q50LG9 513 aa5.38□□□□□ -1.55
GTDC1-208ENST00000415569 PTF1AQ7RTS3 328 aa5.38□□□□□ -1.55
GTDC1-208ENST00000415569 SYTL4Q96C24 671 aaPredicted RBP5.38□□□□□ -1.55
GTDC1-208ENST00000415569 EVI5LQ96CN4 794 aa5.38□□□□□ -1.55
GTDC1-208ENST00000415569 ZNF594Q96JF6 807 aaPredicted RBP5.38□□□□□ -1.55
GTDC1-208ENST00000415569 C8orf37Q96NL8 207 aa5.38□□□□□ -1.55
GTDC1-208ENST00000415569 CCDC87Q9NVE4 849 aa5.38□□□□□ -1.55
GTDC1-208ENST00000415569 MYO5AQ9Y4I1 1855 aaKnown RBP5.38□□□□□ -1.55
GTDC1-208ENST00000415569 LAMA4Q16363 1823 aa5.38□□□□□ -1.55
GTDC1-208ENST00000415569 BRWD3Q6RI45 1802 aa5.38□□□□□ -1.55
GTDC1-208ENST00000415569 EYA2O00167 538 aa5.38□□□□□ -1.55
GTDC1-208ENST00000415569 FRAT2O75474 233 aaPredicted RBP5.38□□□□□ -1.55
GTDC1-208ENST00000415569 CAMTA2O94983 1202 aa5.38□□□□□ -1.55
GTDC1-208ENST00000415569 CERKQ8TCT0 537 aa5.38□□□□□ -1.55
GTDC1-208ENST00000415569 FAM89AQ96GI7 184 aa5.38□□□□□ -1.55
GTDC1-208ENST00000415569 DBNDD2Q9BQY9 259 aa5.38□□□□□ -1.55
GTDC1-208ENST00000415569 PUS3Q9BZE2 481 aaKnown RBP5.38□□□□□ -1.55
GTDC1-208ENST00000415569 DOCK2Q92608 1830 aa5.37□□□□□ -1.55
GTDC1-208ENST00000415569 TTLL13PA6NNM8 815 aa5.37□□□□□ -1.55
GTDC1-208ENST00000415569 IL15P40933 162 aaPredicted RBP5.37□□□□□ -1.55
GTDC1-208ENST00000415569 MKRN3Q13064 507 aaKnown RBP5.37□□□□□ -1.55
GTDC1-208ENST00000415569 E2F4Q16254 413 aa5.37□□□□□ -1.55
GTDC1-208ENST00000415569 HSP90AB3PQ58FF7 597 aa5.37□□□□□ -1.55
GTDC1-208ENST00000415569 RTL5Q5HYW3 569 aaPredicted RBP5.37□□□□□ -1.55
GTDC1-208ENST00000415569 LINC00116Q8NCU8 138 aa5.37□□□□□ -1.55
GTDC1-208ENST00000415569 GPATCH3Q96I76 525 aa5.37□□□□□ -1.55
GTDC1-208ENST00000415569 HAUS7Q99871 368 aa5.37□□□□□ -1.55
GTDC1-208ENST00000415569 LARP6Q9BRS8 491 aaKnown RBP5.37□□□□□ -1.55
GTDC1-208ENST00000415569 GALR2O43603 387 aaPredicted RBP5.37□□□□□ -1.55
GTDC1-208ENST00000415569 ONECUT3O60422 494 aaPredicted RBP5.37□□□□□ -1.55
GTDC1-208ENST00000415569 ATP6V1AP38606 617 aa5.37□□□□□ -1.55
GTDC1-208ENST00000415569 PTH1RQ03431 593 aa5.37□□□□□ -1.55
GTDC1-208ENST00000415569 DZIP3Q86Y13 1208 aaKnown RBP5.37□□□□□ -1.55
GTDC1-208ENST00000415569 VGLL2Q8N8G2 317 aa5.37□□□□□ -1.55
GTDC1-208ENST00000415569 TTLL11Q8NHH1 800 aa5.37□□□□□ -1.55
GTDC1-208ENST00000415569 EDC3Q96F86 508 aaKnown RBP5.37□□□□□ -1.55
GTDC1-208ENST00000415569 NGLY1Q96IV0 654 aa5.37□□□□□ -1.55
GTDC1-208ENST00000415569 FAM227BQ96M60 508 aa5.37□□□□□ -1.55
GTDC1-208ENST00000415569 ANO2Q9NQ90 1003 aa5.37□□□□□ -1.55
GTDC1-208ENST00000415569 CHMP5Q9NZZ3 219 aa5.37□□□□□ -1.55
GTDC1-208ENST00000415569 TBC1D2BQ9UPU7 963 aa5.37□□□□□ -1.55
GTDC1-208ENST00000415569 RIPOR2Q9Y4F9 1068 aa5.37□□□□□ -1.55
GTDC1-208ENST00000415569 SNX14Q9Y5W7 946 aa5.37□□□□□ -1.55
GTDC1-208ENST00000415569 A0A0D9SFI3 127 aa5.36□□□□□ -1.55
GTDC1-208ENST00000415569 GPTP24298 496 aa5.36□□□□□ -1.55
GTDC1-208ENST00000415569 CTSWP56202 376 aa5.36□□□□□ -1.55
GTDC1-208ENST00000415569 NMIQ13287 307 aaPredicted RBP5.36□□□□□ -1.55
GTDC1-208ENST00000415569 CWC27Q6UX04 472 aaKnown RBP5.36□□□□□ -1.55
GTDC1-208ENST00000415569 TTC14Q96N46 770 aa5.36□□□□□ -1.55
GTDC1-208ENST00000415569 BOLA2Q9H3K6 86 aa5.36□□□□□ -1.55
GTDC1-208ENST00000415569 TAF1P21675 1872 aa5.36□□□□□ -1.55
GTDC1-208ENST00000415569 UBR3Q6ZT12 1888 aa5.36□□□□□ -1.55
GTDC1-208ENST00000415569 RTL9Q8NET4 1388 aa5.36□□□□□ -1.55
GTDC1-208ENST00000415569 CNTNAP4Q9C0A0 1308 aa5.36□□□□□ -1.55
GTDC1-208ENST00000415569 NTSR2O95665 410 aa5.36□□□□□ -1.55
GTDC1-208ENST00000415569 CHGBP05060 677 aa5.36□□□□□ -1.55
GTDC1-208ENST00000415569 CYP2E1P05181 493 aaPredicted RBP5.36□□□□□ -1.55
GTDC1-208ENST00000415569 HSPA1LP34931 641 aa5.36□□□□□ -1.55
GTDC1-208ENST00000415569 CUL4AQ13619 759 aa5.36□□□□□ -1.55
GTDC1-208ENST00000415569 RAB3GAP1Q15042 981 aa5.36□□□□□ -1.55
GTDC1-208ENST00000415569 NECTIN1Q15223 517 aa5.36□□□□□ -1.55
GTDC1-208ENST00000415569 SUSD4Q5VX71 490 aa5.36□□□□□ -1.55
GTDC1-208ENST00000415569 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.36□□□□□ -1.55
GTDC1-208ENST00000415569 SMARCC1Q92922 1105 aaPredicted RBP5.36□□□□□ -1.55
GTDC1-208ENST00000415569 GREM2Q9H772 168 aa5.36□□□□□ -1.55
GTDC1-208ENST00000415569 USP21Q9UK80 565 aa5.36□□□□□ -1.55
GTDC1-208ENST00000415569 ZNF330Q9Y3S2 320 aaPredicted RBP5.36□□□□□ -1.55
GTDC1-208ENST00000415569 RPAP1Q9BWH6 1393 aaPredicted RBP5.36□□□□□ -1.55
GTDC1-208ENST00000415569 CCDC171Q6TFL3 1326 aa5.35□□□□□ -1.55
GTDC1-208ENST00000415569 SEMA3EO15041 775 aa5.35□□□□□ -1.55
GTDC1-208ENST00000415569 POTEHQ6S545 545 aa5.35□□□□□ -1.55
GTDC1-208ENST00000415569 ZNF589Q86UQ0 364 aaPredicted RBP5.35□□□□□ -1.55
GTDC1-208ENST00000415569 MAP4K1Q92918 833 aa5.35□□□□□ -1.55
GTDC1-208ENST00000415569 AK7Q96M32 723 aa5.35□□□□□ -1.55
GTDC1-208ENST00000415569 BMP2KQ9NSY1 1161 aaPredicted RBP5.35□□□□□ -1.55
GTDC1-208ENST00000415569 CCDC9Q9Y3X0 531 aaKnown RBP5.35□□□□□ -1.55
GTDC1-208ENST00000415569 NDUFB9Q9Y6M9 179 aa5.35□□□□□ -1.55
GTDC1-208ENST00000415569 ABCC12Q96J65 1359 aa5.35□□□□□ -1.55
GTDC1-208ENST00000415569 TNRC6CQ9HCJ0 1690 aaKnown RBP5.35□□□□□ -1.55
GTDC1-208ENST00000415569 A0A1B0GUL7 405 aa5.35□□□□□ -1.55
GTDC1-208ENST00000415569 HIP1O00291 1037 aa5.35□□□□□ -1.55
GTDC1-208ENST00000415569 IRS4O14654 1257 aaPredicted RBP5.35□□□□□ -1.55
GTDC1-208ENST00000415569 ADORA1P30542 326 aa5.35□□□□□ -1.55
GTDC1-208ENST00000415569 TIMM10P62072 90 aa5.35□□□□□ -1.55
GTDC1-208ENST00000415569 COL9A3Q14050 684 aaPredicted RBP5.35□□□□□ -1.55
GTDC1-208ENST00000415569 CLEC17AQ6ZS10 378 aa5.35□□□□□ -1.55
GTDC1-208ENST00000415569 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.35□□□□□ -1.55
GTDC1-208ENST00000415569 TICAM2Q86XR7 235 aa5.35□□□□□ -1.55
GTDC1-208ENST00000415569 BCL2L12Q9HB09 334 aa5.35□□□□□ -1.55
GTDC1-208ENST00000415569 DIAPH3Q9NSV4 1193 aa5.35□□□□□ -1.55
GTDC1-208ENST00000415569 CHMP3Q9Y3E7 222 aa5.35□□□□□ -1.55
GTDC1-208ENST00000415569 SH3TC1Q8TE82 1336 aa5.35□□□□□ -1.55
GTDC1-208ENST00000415569 PDE8AO60658 829 aa5.34□□□□□ -1.55
GTDC1-208ENST00000415569 TAF5LO75529 589 aa5.34□□□□□ -1.55
GTDC1-208ENST00000415569 ITGA6P23229 1130 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms