RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 HAUS7Q99871 368 aa16.16■□□□□ 0.18
SSR4P1-201ENST00000415143 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
SSR4P1-201ENST00000415143 CEP126Q9P2H0 1117 aa16.16■□□□□ 0.18
SSR4P1-201ENST00000415143 HSP90B1P14625 803 aaKnown RBP16.15■□□□□ 0.18
SSR4P1-201ENST00000415143 MRE11P49959 708 aa16.15■□□□□ 0.18
SSR4P1-201ENST00000415143 KLHL40Q2TBA0 621 aa16.15■□□□□ 0.18
SSR4P1-201ENST00000415143 DNAJC10Q8IXB1 793 aa16.15■□□□□ 0.18
SSR4P1-201ENST00000415143 ZBTB38Q8NAP3 1195 aaPredicted RBP16.15■□□□□ 0.18
SSR4P1-201ENST00000415143 KLHDC4Q8TBB5 520 aa16.15■□□□□ 0.18
SSR4P1-201ENST00000415143 WDR90Q96KV7 1748 aa16.15■□□□□ 0.18
SSR4P1-201ENST00000415143 PDRG1Q9NUG6 133 aa16.15■□□□□ 0.18
SSR4P1-201ENST00000415143 MAP3K15Q6ZN16 1313 aa16.15■□□□□ 0.18
SSR4P1-201ENST00000415143 CDHR2Q9BYE9 1310 aa16.15■□□□□ 0.18
SSR4P1-201ENST00000415143 WDR33Q9C0J8 1336 aaKnown RBP16.15■□□□□ 0.18
SSR4P1-201ENST00000415143 ERVV-1B6SEH8 477 aa16.14■□□□□ 0.17
SSR4P1-201ENST00000415143 NECTIN1Q15223 517 aa16.14■□□□□ 0.17
SSR4P1-201ENST00000415143 TAF7LQ5H9L4 462 aa16.14■□□□□ 0.17
SSR4P1-201ENST00000415143 PRPF40BQ6NWY9 871 aaKnown RBP16.14■□□□□ 0.17
SSR4P1-201ENST00000415143 GIGYF2Q6Y7W6 1299 aaKnown RBP16.14■□□□□ 0.17
SSR4P1-201ENST00000415143 UPF3BQ9BZI7 483 aaKnown RBP16.14■□□□□ 0.17
SSR4P1-201ENST00000415143 ALDH8A1Q9H2A2 487 aaPredicted RBP16.14■□□□□ 0.17
SSR4P1-201ENST00000415143 ZSWIM6Q9HCJ5 1215 aa16.14■□□□□ 0.17
SSR4P1-201ENST00000415143 DBNLQ9UJU6 430 aaKnown RBP16.14■□□□□ 0.17
SSR4P1-201ENST00000415143 ASAP1Q9ULH1 1129 aa16.14■□□□□ 0.17
SSR4P1-201ENST00000415143 ATP6V1DQ9Y5K8 247 aa16.14■□□□□ 0.17
SSR4P1-201ENST00000415143 RBM8AQ9Y5S9 174 aaKnown RBP16.14■□□□□ 0.17
SSR4P1-201ENST00000415143 DDX49Q9Y6V7 483 aaKnown RBP16.14■□□□□ 0.17
SSR4P1-201ENST00000415143 U3KPZ7 1027 aaPredicted RBP16.14■□□□□ 0.17
SSR4P1-201ENST00000415143 NCLP19338 710 aaKnown RBP16.13■□□□□ 0.17
SSR4P1-201ENST00000415143 CASTP20810 708 aaKnown RBP16.13■□□□□ 0.17
SSR4P1-201ENST00000415143 ZGPATQ8N5A5 531 aaKnown RBP16.13■□□□□ 0.17
SSR4P1-201ENST00000415143 JARID2Q92833 1246 aaPredicted RBP16.13■□□□□ 0.17
SSR4P1-201ENST00000415143 CHMP4CQ96CF2 233 aa16.13■□□□□ 0.17
SSR4P1-201ENST00000415143 JAKMIP1Q96N16 626 aaKnown RBP16.13■□□□□ 0.17
SSR4P1-201ENST00000415143 TTC14Q96N46 770 aa16.13■□□□□ 0.17
SSR4P1-201ENST00000415143 NEUROD6Q96NK8 337 aa16.13■□□□□ 0.17
SSR4P1-201ENST00000415143 TLR7Q9NYK1 1049 aaKnown RBP16.13■□□□□ 0.17
SSR4P1-201ENST00000415143 DOT1LQ8TEK3 1739 aa16.12■□□□□ 0.17
SSR4P1-201ENST00000415143 SLC34A2O95436 690 aa16.12■□□□□ 0.17
SSR4P1-201ENST00000415143 BRD1O95696 1058 aa16.12■□□□□ 0.17
SSR4P1-201ENST00000415143 MBD3O95983 291 aa16.12■□□□□ 0.17
SSR4P1-201ENST00000415143 IL6STP40189 918 aaPredicted RBP16.12■□□□□ 0.17
SSR4P1-201ENST00000415143 IFIT5Q13325 482 aaKnown RBP16.12■□□□□ 0.17
SSR4P1-201ENST00000415143 TSGA10IPQ3SY00 556 aa16.12■□□□□ 0.17
SSR4P1-201ENST00000415143 MCMDC2Q4G0Z9 681 aa16.12■□□□□ 0.17
SSR4P1-201ENST00000415143 CCDC158Q5M9N0 1113 aa16.12■□□□□ 0.17
SSR4P1-201ENST00000415143 CREB3L3Q68CJ9 461 aa16.12■□□□□ 0.17
SSR4P1-201ENST00000415143 MCTP1Q6DN14 999 aa16.12■□□□□ 0.17
SSR4P1-201ENST00000415143 RUFY3Q7L099 469 aa16.12■□□□□ 0.17
SSR4P1-201ENST00000415143 AK7Q96M32 723 aa16.12■□□□□ 0.17
SSR4P1-201ENST00000415143 HELLSQ9NRZ9 838 aa16.12■□□□□ 0.17
SSR4P1-201ENST00000415143 SMC3Q9UQE7 1217 aa16.12■□□□□ 0.17
SSR4P1-201ENST00000415143 ZNF330Q9Y3S2 320 aaPredicted RBP16.12■□□□□ 0.17
SSR4P1-201ENST00000415143 AK2P54819 239 aa16.11■□□□□ 0.17
SSR4P1-201ENST00000415143 KCNQ4P56696 695 aa16.11■□□□□ 0.17
SSR4P1-201ENST00000415143 PTH1RQ03431 593 aa16.11■□□□□ 0.17
SSR4P1-201ENST00000415143 SLC27A3Q5K4L6 730 aa16.11■□□□□ 0.17
SSR4P1-201ENST00000415143 GORABQ5T7V8 394 aa16.11■□□□□ 0.17
SSR4P1-201ENST00000415143 BLOC1S2Q6QNY1 142 aa16.11■□□□□ 0.17
SSR4P1-201ENST00000415143 KBTBD3Q8NAB2 608 aa16.11■□□□□ 0.17
SSR4P1-201ENST00000415143 DBNDD2Q9BQY9 259 aa16.11■□□□□ 0.17
SSR4P1-201ENST00000415143 GZF1Q9H116 711 aaPredicted RBP16.11■□□□□ 0.17
SSR4P1-201ENST00000415143 IL25Q9H293 177 aa16.11■□□□□ 0.17
SSR4P1-201ENST00000415143 MED23Q9ULK4 1368 aa16.11■□□□□ 0.17
SSR4P1-201ENST00000415143 FSD2A1L4K1 749 aa16.1■□□□□ 0.17
SSR4P1-201ENST00000415143 SLC27A2O14975 620 aa16.1■□□□□ 0.17
SSR4P1-201ENST00000415143 CSF1RP07333 972 aa16.1■□□□□ 0.17
SSR4P1-201ENST00000415143 CYP19A1P11511 503 aaPredicted RBP16.1■□□□□ 0.17
SSR4P1-201ENST00000415143 CSPP1Q1MSJ5 1256 aa16.1■□□□□ 0.17
SSR4P1-201ENST00000415143 MSL1Q68DK7 614 aa16.1■□□□□ 0.17
SSR4P1-201ENST00000415143 ATG9AQ7Z3C6 839 aa16.1■□□□□ 0.17
SSR4P1-201ENST00000415143 RASEFQ8IZ41 740 aa16.1■□□□□ 0.17
SSR4P1-201ENST00000415143 FAM227BQ96M60 508 aa16.1■□□□□ 0.17
SSR4P1-201ENST00000415143 DNAJC2Q99543 621 aaKnown RBP16.1■□□□□ 0.17
SSR4P1-201ENST00000415143 TOGARAM1Q9Y4F4 1720 aa16.1■□□□□ 0.17
SSR4P1-201ENST00000415143 PALLDQ8WX93 1383 aa16.1■□□□□ 0.17
SSR4P1-201ENST00000415143 ABCC12Q96J65 1359 aa16.1■□□□□ 0.17
SSR4P1-201ENST00000415143 ZFYP08048 801 aaPredicted RBP16.09■□□□□ 0.17
SSR4P1-201ENST00000415143 HMGB1P09429 215 aaKnown RBP16.09■□□□□ 0.17
SSR4P1-201ENST00000415143 HTRA3P83110 453 aa16.09■□□□□ 0.17
SSR4P1-201ENST00000415143 NOL8Q76FK4 1167 aaKnown RBP16.09■□□□□ 0.17
SSR4P1-201ENST00000415143 SMARCC1Q92922 1105 aaPredicted RBP16.09■□□□□ 0.17
SSR4P1-201ENST00000415143 SYAP1Q96A49 352 aaPredicted RBP16.09■□□□□ 0.17
SSR4P1-201ENST00000415143 KLRG1Q96E93 195 aa16.09■□□□□ 0.17
SSR4P1-201ENST00000415143 PAG1Q9NWQ8 432 aa16.09■□□□□ 0.17
SSR4P1-201ENST00000415143 WWC3Q9ULE0 1092 aa16.09■□□□□ 0.17
SSR4P1-201ENST00000415143 SH3TC1Q8TE82 1336 aa16.09■□□□□ 0.17
SSR4P1-201ENST00000415143 PCNTO95613 3336 aa16.09■□□□□ 0.17
SSR4P1-201ENST00000415143 A0A0D9SFI3 127 aa16.08■□□□□ 0.16
SSR4P1-201ENST00000415143 ANKRD18BA2A2Z9 1011 aa16.08■□□□□ 0.16
SSR4P1-201ENST00000415143 TAF5LO75529 589 aa16.08■□□□□ 0.16
SSR4P1-201ENST00000415143 TOMM70O94826 608 aa16.08■□□□□ 0.16
SSR4P1-201ENST00000415143 IFIT1P09914 478 aaKnown RBP16.08■□□□□ 0.16
SSR4P1-201ENST00000415143 PDCP20941 246 aa16.08■□□□□ 0.16
SSR4P1-201ENST00000415143 USPL1Q5W0Q7 1092 aa16.08■□□□□ 0.16
SSR4P1-201ENST00000415143 SYTL4Q96C24 671 aaPredicted RBP16.08■□□□□ 0.16
SSR4P1-201ENST00000415143 ITGB4P16144 1822 aa16.08■□□□□ 0.16
SSR4P1-201ENST00000415143 TTC39AQ5SRH9 613 aa16.07■□□□□ 0.16
SSR4P1-201ENST00000415143 ZSCAN25Q6NSZ9 544 aa16.07■□□□□ 0.16
SSR4P1-201ENST00000415143 NLRP10Q86W26 655 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms