RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ZNRF3Q9ULT6 936 aa18.46■□□□□ 0.55
CHD1-202ENST00000414220 DDNO94850 711 aaPredicted RBP18.45■□□□□ 0.54
CHD1-202ENST00000414220 MS4A1P11836 297 aa18.45■□□□□ 0.54
CHD1-202ENST00000414220 INTS3Q68E01 1043 aaKnown RBP18.45■□□□□ 0.54
CHD1-202ENST00000414220 FTSJ3Q8IY81 847 aaKnown RBP18.45■□□□□ 0.54
CHD1-202ENST00000414220 GPC2Q8N158 579 aa18.45■□□□□ 0.54
CHD1-202ENST00000414220 MINPP1Q9UNW1 487 aa18.45■□□□□ 0.54
CHD1-202ENST00000414220 RIMBP2O15034 1052 aa18.44■□□□□ 0.54
CHD1-202ENST00000414220 TOMM70O94826 608 aa18.44■□□□□ 0.54
CHD1-202ENST00000414220 GNAI3P08754 354 aa18.44■□□□□ 0.54
CHD1-202ENST00000414220 KCNJ4P48050 445 aa18.44■□□□□ 0.54
CHD1-202ENST00000414220 TNIP1Q15025 636 aa18.44■□□□□ 0.54
CHD1-202ENST00000414220 LDHAL6AQ6ZMR3 332 aa18.44■□□□□ 0.54
CHD1-202ENST00000414220 CNNM1Q9NRU3 951 aa18.44■□□□□ 0.54
CHD1-202ENST00000414220 POLLQ9UGP5 575 aa18.44■□□□□ 0.54
CHD1-202ENST00000414220 LEMD3Q9Y2U8 911 aa18.44■□□□□ 0.54
CHD1-202ENST00000414220 GJA3Q9Y6H8 435 aa18.44■□□□□ 0.54
CHD1-202ENST00000414220 CCDC88AQ3V6T2 1871 aa18.43■□□□□ 0.54
CHD1-202ENST00000414220 DICER1Q9UPY3 1922 aaKnown RBP18.43■□□□□ 0.54
CHD1-202ENST00000414220 KIF3CO14782 793 aa18.43■□□□□ 0.54
CHD1-202ENST00000414220 TRIM27P14373 513 aa18.43■□□□□ 0.54
CHD1-202ENST00000414220 LMOD1P29536 600 aaPredicted RBP18.43■□□□□ 0.54
CHD1-202ENST00000414220 EPHA10Q5JZY3 1008 aa18.43■□□□□ 0.54
CHD1-202ENST00000414220 BICC1Q9H694 974 aaKnown RBP18.43■□□□□ 0.54
CHD1-202ENST00000414220 MYH3P11055 1940 aa18.43■□□□□ 0.54
CHD1-202ENST00000414220 C1QTNF8P60827 252 aa18.42■□□□□ 0.54
CHD1-202ENST00000414220 RABL6Q3YEC7 729 aaPredicted RBP18.42■□□□□ 0.54
CHD1-202ENST00000414220 CIAPIN1Q6FI81 312 aa18.42■□□□□ 0.54
CHD1-202ENST00000414220 SLC51AQ86UW1 340 aa18.42■□□□□ 0.54
CHD1-202ENST00000414220 CLUAP1Q96AJ1 413 aa18.42■□□□□ 0.54
CHD1-202ENST00000414220 TIAM2Q8IVF5 1701 aa18.41■□□□□ 0.54
CHD1-202ENST00000414220 L3MBTL3Q96JM7 780 aaPredicted RBP18.41■□□□□ 0.54
CHD1-202ENST00000414220 ZNF541Q9H0D2 1346 aa18.41■□□□□ 0.54
CHD1-202ENST00000414220 TAF1P21675 1872 aa18.4■□□□□ 0.54
CHD1-202ENST00000414220 CHRNDQ07001 517 aa18.4■□□□□ 0.54
CHD1-202ENST00000414220 DZIP1LQ8IYY4 767 aaKnown RBP18.4■□□□□ 0.54
CHD1-202ENST00000414220 RBM46Q8TBY0 533 aaKnown RBP18.4■□□□□ 0.54
CHD1-202ENST00000414220 HACL1Q9UJ83 578 aa18.4■□□□□ 0.54
CHD1-202ENST00000414220 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.39■□□□□ 0.53
CHD1-202ENST00000414220 KAZALD1Q96I82 304 aa18.39■□□□□ 0.53
CHD1-202ENST00000414220 DBNDD1Q9H9R9 158 aa18.39■□□□□ 0.53
CHD1-202ENST00000414220 LRRC37AA6NMS7 1700 aa18.39■□□□□ 0.53
CHD1-202ENST00000414220 ZNF804BA4D1E1 1349 aa18.39■□□□□ 0.53
CHD1-202ENST00000414220 ECE2O60344 883 aa18.38■□□□□ 0.53
CHD1-202ENST00000414220 CXCL9Q07325 125 aa18.38■□□□□ 0.53
CHD1-202ENST00000414220 DOK7Q18PE1 504 aa18.38■□□□□ 0.53
CHD1-202ENST00000414220 PODNQ7Z5L7 613 aa18.38■□□□□ 0.53
CHD1-202ENST00000414220 PNMA8AQ86V59 439 aaPredicted RBP18.38■□□□□ 0.53
CHD1-202ENST00000414220 ZNF594Q96JF6 807 aaPredicted RBP18.38■□□□□ 0.53
CHD1-202ENST00000414220 RCAN3Q9UKA8 241 aa18.38■□□□□ 0.53
CHD1-202ENST00000414220 RAD17O75943 681 aa18.37■□□□□ 0.53
CHD1-202ENST00000414220 FSTL1Q12841 308 aa18.37■□□□□ 0.53
CHD1-202ENST00000414220 ANKRD44Q8N8A2 993 aa18.37■□□□□ 0.53
CHD1-202ENST00000414220 SMC1BQ8NDV3 1235 aa18.37■□□□□ 0.53
CHD1-202ENST00000414220 MROH5Q6ZUA9 1318 aa18.37■□□□□ 0.53
CHD1-202ENST00000414220 MED23Q9ULK4 1368 aa18.37■□□□□ 0.53
CHD1-202ENST00000414220 PLIN1O60240 522 aa18.36■□□□□ 0.53
CHD1-202ENST00000414220 GNAI2P04899 355 aa18.36■□□□□ 0.53
CHD1-202ENST00000414220 TMEM57Q8N5G2 664 aa18.36■□□□□ 0.53
CHD1-202ENST00000414220 YTHDC1Q96MU7 727 aaKnown RBP18.36■□□□□ 0.53
CHD1-202ENST00000414220 GPR101Q96P66 508 aaPredicted RBP18.36■□□□□ 0.53
CHD1-202ENST00000414220 MEIS3Q99687 375 aa18.36■□□□□ 0.53
CHD1-202ENST00000414220 LRRFIP2Q9Y608 721 aaKnown RBP18.36■□□□□ 0.53
CHD1-202ENST00000414220 WDR90Q96KV7 1748 aa18.35■□□□□ 0.53
CHD1-202ENST00000414220 EPHX2P34913 555 aa18.35■□□□□ 0.53
CHD1-202ENST00000414220 ITPRIPQ8IWB1 547 aa18.35■□□□□ 0.53
CHD1-202ENST00000414220 COA1Q9GZY4 146 aa18.35■□□□□ 0.53
CHD1-202ENST00000414220 CHMP4BQ9H444 224 aaKnown RBP18.35■□□□□ 0.53
CHD1-202ENST00000414220 TAF1DQ9H5J8 278 aaPredicted RBP18.35■□□□□ 0.53
CHD1-202ENST00000414220 FBXO3Q9UK99 471 aa18.35■□□□□ 0.53
CHD1-202ENST00000414220 POTECB2RU33 542 aa18.34■□□□□ 0.53
CHD1-202ENST00000414220 TAF5LO75529 589 aa18.34■□□□□ 0.53
CHD1-202ENST00000414220 RPS12P25398 132 aaKnown RBP18.34■□□□□ 0.53
CHD1-202ENST00000414220 UBE4AQ14139 1066 aa18.34■□□□□ 0.53
CHD1-202ENST00000414220 EAPPQ56P03 285 aaPredicted RBP18.34■□□□□ 0.53
CHD1-202ENST00000414220 METTL24Q5JXM2 366 aa18.34■□□□□ 0.53
CHD1-202ENST00000414220 HELBQ8NG08 1087 aaPredicted RBP18.34■□□□□ 0.53
CHD1-202ENST00000414220 CLEC11AQ9Y240 323 aa18.34■□□□□ 0.53
CHD1-202ENST00000414220 DUOX1Q9NRD9 1551 aa18.34■□□□□ 0.53
CHD1-202ENST00000414220 YDJCA8MPS7 323 aa18.33■□□□□ 0.52
CHD1-202ENST00000414220 H7C1D1 291 aa18.33■□□□□ 0.52
CHD1-202ENST00000414220 DPF2Q92785 391 aa18.33■□□□□ 0.52
CHD1-202ENST00000414220 COL4A1P02462 1669 aa18.33■□□□□ 0.52
CHD1-202ENST00000414220 PSMD14O00487 310 aa18.32■□□□□ 0.52
CHD1-202ENST00000414220 GMPSP49915 693 aaPredicted RBP18.32■□□□□ 0.52
CHD1-202ENST00000414220 USP50Q70EL3 339 aaPredicted RBP18.32■□□□□ 0.52
CHD1-202ENST00000414220 ZNF804AQ7Z570 1209 aa18.32■□□□□ 0.52
CHD1-202ENST00000414220 LDHDQ86WU2 507 aa18.32■□□□□ 0.52
CHD1-202ENST00000414220 TNNQ9UQP3 1299 aa18.32■□□□□ 0.52
CHD1-202ENST00000414220 RIPOR2Q9Y4F9 1068 aa18.32■□□□□ 0.52
CHD1-202ENST00000414220 COL4A5P29400 1685 aa18.31■□□□□ 0.52
CHD1-202ENST00000414220 USP17L3A6NCW0 530 aa18.31■□□□□ 0.52
CHD1-202ENST00000414220 USP17L4A6NCW7 530 aa18.31■□□□□ 0.52
CHD1-202ENST00000414220 EYA2O00167 538 aa18.31■□□□□ 0.52
CHD1-202ENST00000414220 SCNN1DP51172 638 aa18.31■□□□□ 0.52
CHD1-202ENST00000414220 CHADLQ6NUI6 762 aa18.31■□□□□ 0.52
CHD1-202ENST00000414220 C15orf52Q6ZUT6 534 aaKnown RBP18.31■□□□□ 0.52
CHD1-202ENST00000414220 USP17L1Q7RTZ2 530 aa18.31■□□□□ 0.52
CHD1-202ENST00000414220 PUS3Q9BZE2 481 aaKnown RBP18.31■□□□□ 0.52
CHD1-202ENST00000414220 ADARB2Q9NS39 739 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms