RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 LDHBP07195 334 aaKnown RBP19.88■□□□□ 0.77
PHRF1-202ENST00000413872 NEFHP12036 1026 aa19.88■□□□□ 0.77
PHRF1-202ENST00000413872 DENND2AQ9ULE3 1009 aa19.88■□□□□ 0.77
PHRF1-202ENST00000413872 IDEP14735 1019 aa19.88■□□□□ 0.77
PHRF1-202ENST00000413872 AXDND1Q5T1B0 1012 aaPredicted RBP19.88■□□□□ 0.77
PHRF1-202ENST00000413872 METTL22Q9BUU2 404 aaPredicted RBP19.88■□□□□ 0.77
PHRF1-202ENST00000413872 ARHGEF5Q12774 1597 aa19.88■□□□□ 0.77
PHRF1-202ENST00000413872 CHMP4BP1P59074 171 aa19.88■□□□□ 0.77
PHRF1-202ENST00000413872 F8W031 263 aaPredicted RBP19.88■□□□□ 0.77
PHRF1-202ENST00000413872 FAM177A1Q8N128 213 aaPredicted RBP19.88■□□□□ 0.77
PHRF1-202ENST00000413872 STX1AQ16623 288 aa19.87■□□□□ 0.77
PHRF1-202ENST00000413872 TNPO1Q92973 898 aaKnown RBP19.87■□□□□ 0.77
PHRF1-202ENST00000413872 RMND1Q9NWS8 449 aa19.87■□□□□ 0.77
PHRF1-202ENST00000413872 SEPT7Q16181 437 aaKnown RBP19.87■□□□□ 0.77
PHRF1-202ENST00000413872 SLC52A2Q9HAB3 445 aa19.87■□□□□ 0.77
PHRF1-202ENST00000413872 EIF3JO75822 258 aaKnown RBP19.87■□□□□ 0.77
PHRF1-202ENST00000413872 ALG1Q9BT22 464 aa19.87■□□□□ 0.77
PHRF1-202ENST00000413872 UBE2HP62256 183 aa19.87■□□□□ 0.77
PHRF1-202ENST00000413872 ZRSR2Q15696 482 aaKnown RBP19.87■□□□□ 0.77
PHRF1-202ENST00000413872 SAMM50Q9Y512 469 aa19.87■□□□□ 0.77
PHRF1-202ENST00000413872 PATL2C9JE40 543 aaKnown RBP19.86■□□□□ 0.77
PHRF1-202ENST00000413872 CALML3P27482 149 aa19.86■□□□□ 0.77
PHRF1-202ENST00000413872 KCNG4Q8TDN1 519 aa19.86■□□□□ 0.77
PHRF1-202ENST00000413872 TMX3Q96JJ7 454 aa19.86■□□□□ 0.77
PHRF1-202ENST00000413872 ZBTB40Q9NUA8 1239 aa19.86■□□□□ 0.77
PHRF1-202ENST00000413872 PLXNC1O60486 1568 aa19.86■□□□□ 0.77
PHRF1-202ENST00000413872 SSR1P43307 286 aaKnown RBP19.86■□□□□ 0.77
PHRF1-202ENST00000413872 YEATS4O95619 227 aa19.86■□□□□ 0.77
PHRF1-202ENST00000413872 NMIQ13287 307 aaPredicted RBP19.86■□□□□ 0.77
PHRF1-202ENST00000413872 TFIP11Q9UBB9 837 aaKnown RBP19.86■□□□□ 0.77
PHRF1-202ENST00000413872 NEMFO60524 1076 aa19.85■□□□□ 0.77
PHRF1-202ENST00000413872 PICALMQ13492 652 aa19.85■□□□□ 0.77
PHRF1-202ENST00000413872 CWC15Q9P013 229 aaKnown RBP19.85■□□□□ 0.77
PHRF1-202ENST00000413872 TBCAO75347 108 aaKnown RBP19.85■□□□□ 0.77
PHRF1-202ENST00000413872 MTIF2P46199 727 aaKnown RBP19.85■□□□□ 0.77
PHRF1-202ENST00000413872 TNNI2P48788 182 aa19.85■□□□□ 0.77
PHRF1-202ENST00000413872 TFCP2Q12800 502 aa19.85■□□□□ 0.77
PHRF1-202ENST00000413872 TTC6Q86TZ1 520 aa19.85■□□□□ 0.77
PHRF1-202ENST00000413872 CERS3Q8IU89 383 aa19.85■□□□□ 0.77
PHRF1-202ENST00000413872 EYA2O00167 538 aa19.84■□□□□ 0.77
PHRF1-202ENST00000413872 PDE8AO60658 829 aa19.84■□□□□ 0.77
PHRF1-202ENST00000413872 USO1O60763 962 aaKnown RBP19.84■□□□□ 0.77
PHRF1-202ENST00000413872 CCDC40Q4G0X9 1142 aa19.84■□□□□ 0.77
PHRF1-202ENST00000413872 LARP6Q9BRS8 491 aaKnown RBP19.84■□□□□ 0.77
PHRF1-202ENST00000413872 BICC1Q9H694 974 aaKnown RBP19.84■□□□□ 0.77
PHRF1-202ENST00000413872 CHL1O00533 1208 aa19.84■□□□□ 0.77
PHRF1-202ENST00000413872 ZSCAN22P10073 491 aaPredicted RBP19.84■□□□□ 0.77
PHRF1-202ENST00000413872 MPNDQ8N594 471 aa19.84■□□□□ 0.77
PHRF1-202ENST00000413872 PRC1O43663 620 aa19.84■□□□□ 0.77
PHRF1-202ENST00000413872 C6orf50Q9HD87 102 aa19.84■□□□□ 0.77
PHRF1-202ENST00000413872 MCM9Q9NXL9 1143 aa19.84■□□□□ 0.77
PHRF1-202ENST00000413872 KRT24Q2M2I5 525 aa19.83■□□□□ 0.77
PHRF1-202ENST00000413872 SLC4A8Q2Y0W8 1093 aa19.83■□□□□ 0.77
PHRF1-202ENST00000413872 CCDC87Q9NVE4 849 aa19.83■□□□□ 0.77
PHRF1-202ENST00000413872 SMC5Q8IY18 1101 aa19.83■□□□□ 0.77
PHRF1-202ENST00000413872 IBSPP21815 317 aaPredicted RBP19.83■□□□□ 0.76
PHRF1-202ENST00000413872 KIF5CO60282 957 aa19.83■□□□□ 0.76
PHRF1-202ENST00000413872 GSDMDP57764 484 aa19.83■□□□□ 0.76
PHRF1-202ENST00000413872 USP37Q86T82 979 aa19.83■□□□□ 0.76
PHRF1-202ENST00000413872 MAGEB6Q8N7X4 407 aa19.82■□□□□ 0.76
PHRF1-202ENST00000413872 Q6ZUG5 572 aa19.82■□□□□ 0.76
PHRF1-202ENST00000413872 SYCP3Q8IZU3 236 aa19.82■□□□□ 0.76
PHRF1-202ENST00000413872 HELLSQ9NRZ9 838 aa19.82■□□□□ 0.76
PHRF1-202ENST00000413872 HELBQ8NG08 1087 aaPredicted RBP19.82■□□□□ 0.76
PHRF1-202ENST00000413872 VEZTQ9HBM0 779 aa19.82■□□□□ 0.76
PHRF1-202ENST00000413872 MAST3O60307 1309 aa19.82■□□□□ 0.76
PHRF1-202ENST00000413872 MAGI2Q86UL8 1455 aa19.82■□□□□ 0.76
PHRF1-202ENST00000413872 ERVV-2B6SEH9 535 aa19.82■□□□□ 0.76
PHRF1-202ENST00000413872 GBP3Q9H0R5 595 aa19.82■□□□□ 0.76
PHRF1-202ENST00000413872 SH2D4AQ9H788 454 aa19.82■□□□□ 0.76
PHRF1-202ENST00000413872 KAT6BQ8WYB5 2073 aa19.82■□□□□ 0.76
PHRF1-202ENST00000413872 NAPAP54920 295 aa19.81■□□□□ 0.76
PHRF1-202ENST00000413872 PUM3Q15397 648 aaKnown RBP19.81■□□□□ 0.76
PHRF1-202ENST00000413872 HEATR3Q7Z4Q2 680 aa19.81■□□□□ 0.76
PHRF1-202ENST00000413872 CKAP2LQ8IYA6 745 aa19.81■□□□□ 0.76
PHRF1-202ENST00000413872 SMARCC2Q8TAQ2 1214 aa19.81■□□□□ 0.76
PHRF1-202ENST00000413872 CLEC11AQ9Y240 323 aa19.81■□□□□ 0.76
PHRF1-202ENST00000413872 CCDC171Q6TFL3 1326 aa19.81■□□□□ 0.76
PHRF1-202ENST00000413872 RAB11FIP4Q86YS3 637 aa19.81■□□□□ 0.76
PHRF1-202ENST00000413872 RRP36Q96EU6 259 aaKnown RBP19.81■□□□□ 0.76
PHRF1-202ENST00000413872 NUP88Q99567 741 aaPredicted RBP19.81■□□□□ 0.76
PHRF1-202ENST00000413872 GTPBP4Q9BZE4 634 aaKnown RBP19.8■□□□□ 0.76
PHRF1-202ENST00000413872 EXOC1Q9NV70 894 aa19.8■□□□□ 0.76
PHRF1-202ENST00000413872 PRKCSHP14314 528 aaPredicted RBP19.8■□□□□ 0.76
PHRF1-202ENST00000413872 SYKP43405 635 aa19.8■□□□□ 0.76
PHRF1-202ENST00000413872 SKIDA1Q1XH10 827 aa19.8■□□□□ 0.76
PHRF1-202ENST00000413872 PTPRTO14522 1441 aa19.8■□□□□ 0.76
PHRF1-202ENST00000413872 LMOD1P29536 600 aaPredicted RBP19.8■□□□□ 0.76
PHRF1-202ENST00000413872 TDRD12Q587J7 1177 aaKnown RBP19.8■□□□□ 0.76
PHRF1-202ENST00000413872 TCERG1LQ5VWI1 586 aa19.8■□□□□ 0.76
PHRF1-202ENST00000413872 MYO5CQ9NQX4 1742 aa19.8■□□□□ 0.76
PHRF1-202ENST00000413872 CLIP2Q9UDT6 1046 aa19.79■□□□□ 0.76
PHRF1-202ENST00000413872 ITGA6P23229 1130 aa19.79■□□□□ 0.76
PHRF1-202ENST00000413872 ZSCAN30Q86W11 494 aa19.79■□□□□ 0.76
PHRF1-202ENST00000413872 FAM89AQ96GI7 184 aa19.79■□□□□ 0.76
PHRF1-202ENST00000413872 FBXO3Q9UK99 471 aa19.79■□□□□ 0.76
PHRF1-202ENST00000413872 ESPNB1AK53 854 aa19.79■□□□□ 0.76
PHRF1-202ENST00000413872 INSRP06213 1382 aa19.79■□□□□ 0.76
PHRF1-202ENST00000413872 PTPN14Q15678 1187 aa19.79■□□□□ 0.76
PHRF1-202ENST00000413872 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.79■□□□□ 0.762e-6■■■■□ 19.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms