RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 MKRN3Q13064 507 aaKnown RBP10.84□□□□□ -0.67
UPF3AP1-201ENST00000413731 GRIPAP1Q4V328 841 aa10.84□□□□□ -0.67
UPF3AP1-201ENST00000413731 GIGYF2Q6Y7W6 1299 aaKnown RBP10.84□□□□□ -0.67
UPF3AP1-201ENST00000413731 LRP10Q7Z4F1 713 aa10.84□□□□□ -0.67
UPF3AP1-201ENST00000413731 BEGAINQ9BUH8 593 aa10.84□□□□□ -0.67
UPF3AP1-201ENST00000413731 GLIS2Q9BZE0 524 aaPredicted RBP10.84□□□□□ -0.67
UPF3AP1-201ENST00000413731 ADARB2Q9NS39 739 aaKnown RBP10.84□□□□□ -0.67
UPF3AP1-201ENST00000413731 SCN9AQ15858 1988 aa10.84□□□□□ -0.67
UPF3AP1-201ENST00000413731 AKAP11Q9UKA4 1901 aa10.84□□□□□ -0.67
UPF3AP1-201ENST00000413731 ERBB4Q15303 1308 aa10.84□□□□□ -0.67
UPF3AP1-201ENST00000413731 ANXA1P04083 346 aa10.83□□□□□ -0.68
UPF3AP1-201ENST00000413731 GMPSP49915 693 aaPredicted RBP10.83□□□□□ -0.68
UPF3AP1-201ENST00000413731 CXCL9Q07325 125 aa10.83□□□□□ -0.68
UPF3AP1-201ENST00000413731 PROSER3Q2NL68 480 aa10.83□□□□□ -0.68
UPF3AP1-201ENST00000413731 SAPCD2Q86UD0 394 aa10.83□□□□□ -0.68
UPF3AP1-201ENST00000413731 PLEKHF1Q96S99 279 aa10.83□□□□□ -0.68
UPF3AP1-201ENST00000413731 ZMYND15Q9H091 742 aa10.83□□□□□ -0.68
UPF3AP1-201ENST00000413731 ATP6V0A2Q9Y487 856 aa10.83□□□□□ -0.68
UPF3AP1-201ENST00000413731 PSME4Q14997 1843 aa10.82□□□□□ -0.68
UPF3AP1-201ENST00000413731 SHTN1A0MZ66 631 aa10.82□□□□□ -0.68
UPF3AP1-201ENST00000413731 NFE2L2Q16236 605 aa10.82□□□□□ -0.68
UPF3AP1-201ENST00000413731 PARP10Q53GL7 1025 aa10.82□□□□□ -0.68
UPF3AP1-201ENST00000413731 PPP1R15BQ5SWA1 713 aa10.82□□□□□ -0.68
UPF3AP1-201ENST00000413731 PPP1R42Q7Z4L9 355 aa10.82□□□□□ -0.68
UPF3AP1-201ENST00000413731 TRPM4Q8TD43 1214 aa10.82□□□□□ -0.68
UPF3AP1-201ENST00000413731 NLRP3Q96P20 1036 aa10.82□□□□□ -0.68
UPF3AP1-201ENST00000413731 UTP14AQ9BVJ6 771 aaKnown RBP10.82□□□□□ -0.68
UPF3AP1-201ENST00000413731 TMEM106CQ9BVX2 250 aa10.82□□□□□ -0.68
UPF3AP1-201ENST00000413731 RTFDC1Q9BY42 306 aaPredicted RBP10.82□□□□□ -0.68
UPF3AP1-201ENST00000413731 PRKRIP1Q9H875 184 aaPredicted RBP10.82□□□□□ -0.68
UPF3AP1-201ENST00000413731 ZNF408Q9H9D4 720 aa10.82□□□□□ -0.68
UPF3AP1-201ENST00000413731 ZNRF3Q9ULT6 936 aa10.82□□□□□ -0.68
UPF3AP1-201ENST00000413731 TRIM66O15016 1216 aa10.81□□□□□ -0.68
UPF3AP1-201ENST00000413731 RAD17O75943 681 aa10.81□□□□□ -0.68
UPF3AP1-201ENST00000413731 NEFMP07197 916 aa10.81□□□□□ -0.68
UPF3AP1-201ENST00000413731 MAP2K2P36507 400 aa10.81□□□□□ -0.68
UPF3AP1-201ENST00000413731 HIRAP54198 1017 aaPredicted RBP10.81□□□□□ -0.68
UPF3AP1-201ENST00000413731 PDE4DQ08499 809 aa10.81□□□□□ -0.68
UPF3AP1-201ENST00000413731 PDIA6Q15084 440 aa10.81□□□□□ -0.68
UPF3AP1-201ENST00000413731 CIAPIN1Q6FI81 312 aa10.81□□□□□ -0.68
UPF3AP1-201ENST00000413731 DPP8Q6V1X1 898 aaPredicted RBP10.81□□□□□ -0.68
UPF3AP1-201ENST00000413731 MCOLN1Q9GZU1 580 aa10.81□□□□□ -0.68
UPF3AP1-201ENST00000413731 CDHR2Q9BYE9 1310 aa10.81□□□□□ -0.68
UPF3AP1-201ENST00000413731 YDJCA8MPS7 323 aa10.8□□□□□ -0.68
UPF3AP1-201ENST00000413731 EIF2S2P20042 333 aaKnown RBP10.8□□□□□ -0.68
UPF3AP1-201ENST00000413731 MLLT1Q03111 559 aaPredicted RBP10.8□□□□□ -0.68
UPF3AP1-201ENST00000413731 KIAA2012Q0VF49 1180 aa10.8□□□□□ -0.68
UPF3AP1-201ENST00000413731 CHRDL2Q6WN34 429 aa10.8□□□□□ -0.68
UPF3AP1-201ENST00000413731 SUPT20HQ8NEM7 779 aa10.8□□□□□ -0.68
UPF3AP1-201ENST00000413731 TSPYL4Q9UJ04 414 aa10.8□□□□□ -0.68
UPF3AP1-201ENST00000413731 MAPK8IP3Q9UPT6 1336 aa10.8□□□□□ -0.68
UPF3AP1-201ENST00000413731 ANP32CO43423 234 aa10.79□□□□□ -0.68
UPF3AP1-201ENST00000413731 HCLS1P14317 486 aaPredicted RBP10.79□□□□□ -0.68
UPF3AP1-201ENST00000413731 RGS19P49795 217 aa10.79□□□□□ -0.68
UPF3AP1-201ENST00000413731 FXR2P51116 673 aaKnown RBP eCLIP10.79□□□□□ -0.68
UPF3AP1-201ENST00000413731 WDR43Q15061 677 aaKnown RBP eCLIP10.79□□□□□ -0.68
UPF3AP1-201ENST00000413731 SLC10A5Q5PT55 438 aa10.79□□□□□ -0.68
UPF3AP1-201ENST00000413731 DLK2Q6UY11 383 aa10.79□□□□□ -0.68
UPF3AP1-201ENST00000413731 MPNDQ8N594 471 aa10.79□□□□□ -0.68
UPF3AP1-201ENST00000413731 ZNF428Q96B54 188 aa10.79□□□□□ -0.68
UPF3AP1-201ENST00000413731 HHIPL1Q96JK4 782 aa10.79□□□□□ -0.68
UPF3AP1-201ENST00000413731 ZIC5Q96T25 663 aa10.79□□□□□ -0.68
UPF3AP1-201ENST00000413731 BCL2L13Q9BXK5 485 aa10.79□□□□□ -0.68
UPF3AP1-201ENST00000413731 TMX4Q9H1E5 349 aaPredicted RBP10.79□□□□□ -0.68
UPF3AP1-201ENST00000413731 VPS33BQ9H267 617 aa10.79□□□□□ -0.68
UPF3AP1-201ENST00000413731 SPEF2Q9C093 1822 aa10.79□□□□□ -0.68
UPF3AP1-201ENST00000413731 DPYSL4O14531 572 aa10.78□□□□□ -0.68
UPF3AP1-201ENST00000413731 CA12O43570 354 aa10.78□□□□□ -0.68
UPF3AP1-201ENST00000413731 GRAPQ13588 217 aa10.78□□□□□ -0.68
UPF3AP1-201ENST00000413731 NLRP10Q86W26 655 aa10.78□□□□□ -0.68
UPF3AP1-201ENST00000413731 SP8Q8IXZ3 490 aa10.78□□□□□ -0.68
UPF3AP1-201ENST00000413731 MICALL2Q8IY33 904 aa10.78□□□□□ -0.68
UPF3AP1-201ENST00000413731 GRAPLQ8TC17 118 aaPredicted RBP10.78□□□□□ -0.68
UPF3AP1-201ENST00000413731 NECTIN2Q92692 538 aa10.78□□□□□ -0.68
UPF3AP1-201ENST00000413731 PGAP2Q9UHJ9 254 aa10.78□□□□□ -0.68
UPF3AP1-201ENST00000413731 TNIP1Q15025 636 aa10.77□□□□□ -0.69
UPF3AP1-201ENST00000413731 XAGE3Q8WTP9 111 aa10.77□□□□□ -0.69
UPF3AP1-201ENST00000413731 PHF12Q96QT6 1004 aa10.77□□□□□ -0.69
UPF3AP1-201ENST00000413731 SH3TC1Q8TE82 1336 aa10.77□□□□□ -0.69
UPF3AP1-201ENST00000413731 ZNF646O15015 1829 aaPredicted RBP10.77□□□□□ -0.69
UPF3AP1-201ENST00000413731 PSMD14O00487 310 aa10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 BBOX1O75936 387 aa10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 EGFRP00533 1210 aa10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 HUNKP57058 714 aa10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 AIMP1Q12904 312 aaKnown RBP10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 DGKZQ13574 1117 aa10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 KRT24Q2M2I5 525 aa10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 HSP90AB3PQ58FF7 597 aa10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 DDX46Q7L014 1031 aaKnown RBP10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 CDC37L1Q7L3B6 337 aa10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 COPS6Q7L5N1 327 aa10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 SAMD7Q7Z3H4 446 aa10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 USP48Q86UV5 1035 aa10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 PNNQ9H307 717 aaKnown RBP10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 DBNDD1Q9H9R9 158 aa10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 TRMT112Q9UI30 125 aaKnown RBP10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 CNOT7Q9UIV1 285 aaKnown RBP10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 TNRC18O15417 2968 aaPredicted RBP10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 RTL9Q8NET4 1388 aa10.76□□□□□ -0.69
UPF3AP1-201ENST00000413731 SPDYE16A6NNV3 312 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms