RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 SHTN1A0MZ66 631 aa12.92□□□□□ -0.34
NCKIPSD-202ENST00000413374 ECE2O60344 883 aa12.92□□□□□ -0.34
NCKIPSD-202ENST00000413374 TNIP1Q15025 636 aa12.92□□□□□ -0.34
NCKIPSD-202ENST00000413374 FAM161AQ3B820 660 aa12.92□□□□□ -0.34
NCKIPSD-202ENST00000413374 WDR90Q96KV7 1748 aa12.92□□□□□ -0.34
NCKIPSD-202ENST00000413374 C9orf78Q9NZ63 289 aaPredicted RBP12.92□□□□□ -0.34
NCKIPSD-202ENST00000413374 MINPP1Q9UNW1 487 aa12.92□□□□□ -0.34
NCKIPSD-202ENST00000413374 DDX60Q8IY21 1712 aaKnown RBP12.91□□□□□ -0.34
NCKIPSD-202ENST00000413374 PSMD14O00487 310 aa12.91□□□□□ -0.34
NCKIPSD-202ENST00000413374 CSF1RP07333 972 aa12.91□□□□□ -0.34
NCKIPSD-202ENST00000413374 IGHMBP2P38935 993 aaKnown RBP12.91□□□□□ -0.34
NCKIPSD-202ENST00000413374 FOXO4P98177 505 aa12.91□□□□□ -0.34
NCKIPSD-202ENST00000413374 EPHA10Q5JZY3 1008 aa12.91□□□□□ -0.34
NCKIPSD-202ENST00000413374 CNTROBQ8N137 903 aa12.91□□□□□ -0.34
NCKIPSD-202ENST00000413374 PLA2G12BQ9BX93 195 aa12.91□□□□□ -0.34
NCKIPSD-202ENST00000413374 SRCIN1Q9C0H9 1055 aa12.91□□□□□ -0.34
NCKIPSD-202ENST00000413374 BSDC1Q9NW68 430 aaPredicted RBP12.91□□□□□ -0.34
NCKIPSD-202ENST00000413374 PODXL2Q9NZ53 605 aa12.91□□□□□ -0.34
NCKIPSD-202ENST00000413374 GPRC5DQ9NZD1 345 aa12.91□□□□□ -0.34
NCKIPSD-202ENST00000413374 TAF1P21675 1872 aa12.91□□□□□ -0.34
NCKIPSD-202ENST00000413374 LAMB2P55268 1798 aa12.9□□□□□ -0.34
NCKIPSD-202ENST00000413374 GRM8O00222 908 aa12.9□□□□□ -0.34
NCKIPSD-202ENST00000413374 ATP2B4P23634 1241 aa12.9□□□□□ -0.34
NCKIPSD-202ENST00000413374 FMR1Q06787 632 aaKnown RBP eCLIP12.9□□□□□ -0.34
NCKIPSD-202ENST00000413374 RBM26Q5T8P6 1007 aaKnown RBP12.9□□□□□ -0.34
NCKIPSD-202ENST00000413374 LMBR1LQ6UX01 489 aa12.9□□□□□ -0.34
NCKIPSD-202ENST00000413374 MPHOSPH8Q99549 860 aa12.9□□□□□ -0.34
NCKIPSD-202ENST00000413374 CNOT7Q9UIV1 285 aaKnown RBP12.9□□□□□ -0.34
NCKIPSD-202ENST00000413374 XDHP47989 1333 aa12.89□□□□□ -0.35
NCKIPSD-202ENST00000413374 ANKRD18BA2A2Z9 1011 aa12.89□□□□□ -0.35
NCKIPSD-202ENST00000413374 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
NCKIPSD-202ENST00000413374 USP50Q70EL3 339 aaPredicted RBP12.89□□□□□ -0.35
NCKIPSD-202ENST00000413374 TRMT2AQ8IZ69 625 aaKnown RBP12.89□□□□□ -0.35
NCKIPSD-202ENST00000413374 HELBQ8NG08 1087 aaPredicted RBP12.89□□□□□ -0.35
NCKIPSD-202ENST00000413374 ZNF594Q96JF6 807 aaPredicted RBP12.89□□□□□ -0.35
NCKIPSD-202ENST00000413374 ADARB2Q9NS39 739 aaKnown RBP12.89□□□□□ -0.35
NCKIPSD-202ENST00000413374 SMC4Q9NTJ3 1288 aa12.89□□□□□ -0.35
NCKIPSD-202ENST00000413374 DICER1Q9UPY3 1922 aaKnown RBP12.88□□□□□ -0.35
NCKIPSD-202ENST00000413374 SNAP23O00161 211 aa12.88□□□□□ -0.35
NCKIPSD-202ENST00000413374 ALDH1L1O75891 902 aa12.88□□□□□ -0.35
NCKIPSD-202ENST00000413374 NBPF7P0C2Y1 421 aaPredicted RBP12.88□□□□□ -0.35
NCKIPSD-202ENST00000413374 CCT4P50991 539 aaKnown RBP12.88□□□□□ -0.35
NCKIPSD-202ENST00000413374 HIRAP54198 1017 aaPredicted RBP12.88□□□□□ -0.35
NCKIPSD-202ENST00000413374 IFIT5Q13325 482 aaKnown RBP12.88□□□□□ -0.35
NCKIPSD-202ENST00000413374 MICALL2Q8IY33 904 aa12.88□□□□□ -0.35
NCKIPSD-202ENST00000413374 KLRG1Q96E93 195 aa12.88□□□□□ -0.35
NCKIPSD-202ENST00000413374 SUCLG2Q96I99 432 aa12.88□□□□□ -0.35
NCKIPSD-202ENST00000413374 MKRN1Q9UHC7 482 aaKnown RBP12.88□□□□□ -0.35
NCKIPSD-202ENST00000413374 DUOX1Q9NRD9 1551 aa12.87□□□□□ -0.35
NCKIPSD-202ENST00000413374 RTL9Q8NET4 1388 aa12.87□□□□□ -0.35
NCKIPSD-202ENST00000413374 H7C1D1 291 aa12.87□□□□□ -0.35
NCKIPSD-202ENST00000413374 TRAF5O00463 557 aa12.87□□□□□ -0.35
NCKIPSD-202ENST00000413374 PLIN1O60240 522 aa12.87□□□□□ -0.35
NCKIPSD-202ENST00000413374 TAF5LO75529 589 aa12.87□□□□□ -0.35
NCKIPSD-202ENST00000413374 CCDC57Q2TAC2 916 aa12.87□□□□□ -0.35
NCKIPSD-202ENST00000413374 TBC1D10BQ4KMP7 808 aaPredicted RBP12.87□□□□□ -0.35
NCKIPSD-202ENST00000413374 TAF7LQ5H9L4 462 aa12.87□□□□□ -0.35
NCKIPSD-202ENST00000413374 SAMD7Q7Z3H4 446 aa12.87□□□□□ -0.35
NCKIPSD-202ENST00000413374 TXNRD3Q86VQ6 643 aa12.87□□□□□ -0.35
NCKIPSD-202ENST00000413374 TRPM4Q8TD43 1214 aa12.87□□□□□ -0.35
NCKIPSD-202ENST00000413374 FBXW7Q969H0 707 aa12.87□□□□□ -0.35
NCKIPSD-202ENST00000413374 NOB1Q9ULX3 412 aaKnown RBP12.87□□□□□ -0.35
NCKIPSD-202ENST00000413374 PASKQ96RG2 1323 aa12.87□□□□□ -0.35
NCKIPSD-202ENST00000413374 KLRK1P26718 216 aa12.86□□□□□ -0.35
NCKIPSD-202ENST00000413374 KCNJ4P48050 445 aa12.86□□□□□ -0.35
NCKIPSD-202ENST00000413374 HNRNPUQ00839 825 aaKnown RBP eCLIP12.86□□□□□ -0.35
NCKIPSD-202ENST00000413374 CHRNDQ07001 517 aa12.86□□□□□ -0.35
NCKIPSD-202ENST00000413374 ALDH1L2Q3SY69 923 aa12.86□□□□□ -0.35
NCKIPSD-202ENST00000413374 CEP350Q5VT06 3117 aa12.86□□□□□ -0.35
NCKIPSD-202ENST00000413374 PTPRCP08575 1304 aa12.86□□□□□ -0.35
NCKIPSD-202ENST00000413374 TMEM88BA6NKF7 163 aa12.85□□□□□ -0.35
NCKIPSD-202ENST00000413374 EGFRP00533 1210 aa12.85□□□□□ -0.35
NCKIPSD-202ENST00000413374 VIL1P09327 827 aaKnown RBP12.85□□□□□ -0.35
NCKIPSD-202ENST00000413374 DLK2Q6UY11 383 aa12.85□□□□□ -0.35
NCKIPSD-202ENST00000413374 KAZALD1Q96I82 304 aa12.85□□□□□ -0.35
NCKIPSD-202ENST00000413374 MXD3Q9BW11 206 aa12.85□□□□□ -0.35
NCKIPSD-202ENST00000413374 GLIS2Q9BZE0 524 aaPredicted RBP12.85□□□□□ -0.35
NCKIPSD-202ENST00000413374 ANKRD2Q9GZV1 360 aa12.85□□□□□ -0.35
NCKIPSD-202ENST00000413374 CREBZFQ9NS37 354 aa12.85□□□□□ -0.35
NCKIPSD-202ENST00000413374 LEMD3Q9Y2U8 911 aa12.85□□□□□ -0.35
NCKIPSD-202ENST00000413374 ZNF804BA4D1E1 1349 aa12.85□□□□□ -0.35
NCKIPSD-202ENST00000413374 LDHAL6AQ6ZMR3 332 aa12.84□□□□□ -0.35
NCKIPSD-202ENST00000413374 DPF2Q92785 391 aa12.84□□□□□ -0.35
NCKIPSD-202ENST00000413374 PUS3Q9BZE2 481 aaKnown RBP12.84□□□□□ -0.35
NCKIPSD-202ENST00000413374 BICC1Q9H694 974 aaKnown RBP12.84□□□□□ -0.35
NCKIPSD-202ENST00000413374 CNNM1Q9NRU3 951 aa12.84□□□□□ -0.35
NCKIPSD-202ENST00000413374 LTBP1Q14766 1721 aa12.83□□□□□ -0.36
NCKIPSD-202ENST00000413374 USP17L3A6NCW0 530 aa12.83□□□□□ -0.36
NCKIPSD-202ENST00000413374 USP17L4A6NCW7 530 aa12.83□□□□□ -0.36
NCKIPSD-202ENST00000413374 RARSP54136 660 aaKnown RBP12.83□□□□□ -0.36
NCKIPSD-202ENST00000413374 RSBN1LQ6PCB5 846 aaPredicted RBP12.83□□□□□ -0.36
NCKIPSD-202ENST00000413374 USP17L1Q7RTZ2 530 aa12.83□□□□□ -0.36
NCKIPSD-202ENST00000413374 PODNQ7Z5L7 613 aa12.83□□□□□ -0.36
NCKIPSD-202ENST00000413374 USP48Q86UV5 1035 aa12.83□□□□□ -0.36
NCKIPSD-202ENST00000413374 USP44Q9H0E7 712 aa12.83□□□□□ -0.36
NCKIPSD-202ENST00000413374 ZNF408Q9H9D4 720 aa12.83□□□□□ -0.36
NCKIPSD-202ENST00000413374 ABT1Q9ULW3 272 aaKnown RBP12.83□□□□□ -0.36
NCKIPSD-202ENST00000413374 RPS12P25398 132 aaKnown RBP12.82□□□□□ -0.36
NCKIPSD-202ENST00000413374 COA1Q9GZY4 146 aa12.82□□□□□ -0.36
NCKIPSD-202ENST00000413374 CT47B1P0C2W7 299 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms