RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 DDX41Q9UJV9 622 aaKnown RBP7.39□□□□□ -1.23
HMGB3P31-201ENST00000413333 INPP5FQ9Y2H2 1132 aa7.39□□□□□ -1.23
HMGB3P31-201ENST00000413333 BNIP3LO60238 219 aa7.38□□□□□ -1.23
HMGB3P31-201ENST00000413333 PSAPP07602 524 aa7.38□□□□□ -1.23
HMGB3P31-201ENST00000413333 GSTT1P30711 240 aa7.38□□□□□ -1.23
HMGB3P31-201ENST00000413333 DNAJA1P31689 397 aaKnown RBP7.38□□□□□ -1.23
HMGB3P31-201ENST00000413333 VEGFBP49765 207 aa7.38□□□□□ -1.23
HMGB3P31-201ENST00000413333 FCGRTP55899 365 aa7.38□□□□□ -1.23
HMGB3P31-201ENST00000413333 PTPN12Q05209 780 aaKnown RBP7.38□□□□□ -1.23
HMGB3P31-201ENST00000413333 PEAR1Q5VY43 1037 aaPredicted RBP7.38□□□□□ -1.23
HMGB3P31-201ENST00000413333 CRIPAKQ8N1N5 446 aa7.38□□□□□ -1.23
HMGB3P31-201ENST00000413333 AAASQ9NRG9 546 aa7.38□□□□□ -1.23
HMGB3P31-201ENST00000413333 PRKAG2Q9UGJ0 569 aa7.38□□□□□ -1.23
HMGB3P31-201ENST00000413333 DACH1Q9UI36 760 aa7.38□□□□□ -1.23
HMGB3P31-201ENST00000413333 SALL4Q9UJQ4 1053 aa7.38□□□□□ -1.23
HMGB3P31-201ENST00000413333 TRAK1Q9UPV9 953 aa7.38□□□□□ -1.23
HMGB3P31-201ENST00000413333 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.38□□□□□ -1.23
HMGB3P31-201ENST00000413333 ST13P50502 369 aaKnown RBP7.37□□□□□ -1.23
HMGB3P31-201ENST00000413333 SPEM2Q0P670 501 aa7.37□□□□□ -1.23
HMGB3P31-201ENST00000413333 CCDC155Q8N6L0 562 aa7.37□□□□□ -1.23
HMGB3P31-201ENST00000413333 SLC43A3Q8NBI5 491 aa7.37□□□□□ -1.23
HMGB3P31-201ENST00000413333 GLIS3Q8NEA6 775 aa7.37□□□□□ -1.23
HMGB3P31-201ENST00000413333 ABHD17AQ96GS6 310 aa7.37□□□□□ -1.23
HMGB3P31-201ENST00000413333 SLC30A3Q99726 388 aa7.37□□□□□ -1.23
HMGB3P31-201ENST00000413333 LIN7BQ9HAP6 207 aa7.37□□□□□ -1.23
HMGB3P31-201ENST00000413333 CUEDC1Q9NWM3 386 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P31-201ENST00000413333 AKAP2Q9Y2D5 859 aa7.37□□□□□ -1.23
HMGB3P31-201ENST00000413333 TRPA1O75762 1119 aa7.36□□□□□ -1.23
HMGB3P31-201ENST00000413333 ACPPP15309 386 aa7.36□□□□□ -1.23
HMGB3P31-201ENST00000413333 CD33P20138 364 aa7.36□□□□□ -1.23
HMGB3P31-201ENST00000413333 LAMC2Q13753 1193 aa7.36□□□□□ -1.23
HMGB3P31-201ENST00000413333 UBAP2LQ14157 1087 aaKnown RBP7.36□□□□□ -1.23
HMGB3P31-201ENST00000413333 COL13A1Q5TAT6 717 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P31-201ENST00000413333 DTHD1Q6ZMT9 781 aa7.36□□□□□ -1.23
HMGB3P31-201ENST00000413333 TRIM22Q8IYM9 498 aa7.36□□□□□ -1.23
HMGB3P31-201ENST00000413333 OXCT2Q9BYC2 517 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P31-201ENST00000413333 SRA1Q9HD15 236 aaKnown RBP7.36□□□□□ -1.23
HMGB3P31-201ENST00000413333 COPRSQ9NQ92 184 aa7.36□□□□□ -1.23
HMGB3P31-201ENST00000413333 TLR7Q9NYK1 1049 aaKnown RBP7.36□□□□□ -1.23
HMGB3P31-201ENST00000413333 F6X3S4 739 aa7.35□□□□□ -1.23
HMGB3P31-201ENST00000413333 ATP2B1P20020 1258 aa7.35□□□□□ -1.23
HMGB3P31-201ENST00000413333 PLAURQ03405 335 aa7.35□□□□□ -1.23
HMGB3P31-201ENST00000413333 HYAL2Q12891 473 aa7.35□□□□□ -1.23
HMGB3P31-201ENST00000413333 GTPBP3Q969Y2 492 aaKnown RBP7.35□□□□□ -1.23
HMGB3P31-201ENST00000413333 NSUN5Q96P11 429 aaKnown RBP7.35□□□□□ -1.23
HMGB3P31-201ENST00000413333 OSMRQ99650 979 aa7.35□□□□□ -1.23
HMGB3P31-201ENST00000413333 IGFLR1Q9H665 355 aa7.35□□□□□ -1.23
HMGB3P31-201ENST00000413333 TMEM238LA0A1B0GVL6 79 aa7.34□□□□□ -1.23
HMGB3P31-201ENST00000413333 FBXO24O75426 580 aa7.34□□□□□ -1.23
HMGB3P31-201ENST00000413333 GTF2F1P35269 517 aaKnown RBP eCLIP7.34□□□□□ -1.23
HMGB3P31-201ENST00000413333 CCDC85BQ15834 202 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P31-201ENST00000413333 DHX32Q7L7V1 743 aaKnown RBP7.34□□□□□ -1.23
HMGB3P31-201ENST00000413333 C3orf58Q8NDZ4 430 aa7.34□□□□□ -1.23
HMGB3P31-201ENST00000413333 DHX38Q92620 1227 aaKnown RBP7.34□□□□□ -1.23
HMGB3P31-201ENST00000413333 ZKSCAN3Q9BRR0 538 aa7.34□□□□□ -1.23
HMGB3P31-201ENST00000413333 NDFIP2Q9NV92 336 aa7.34□□□□□ -1.23
HMGB3P31-201ENST00000413333 HCN2Q9UL51 889 aa7.34□□□□□ -1.23
HMGB3P31-201ENST00000413333 MINDY4BA8MYZ0 360 aa7.33□□□□□ -1.24
HMGB3P31-201ENST00000413333 MLLT1Q03111 559 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P31-201ENST00000413333 ARID5AQ03989 594 aa7.33□□□□□ -1.24
HMGB3P31-201ENST00000413333 TBC1D8BQ0IIM8 1120 aa7.33□□□□□ -1.24
HMGB3P31-201ENST00000413333 MAP3K11Q16584 847 aa7.33□□□□□ -1.24
HMGB3P31-201ENST00000413333 VPS37DQ86XT2 251 aa7.33□□□□□ -1.24
HMGB3P31-201ENST00000413333 RELL1Q8IUW5 271 aa7.33□□□□□ -1.24
HMGB3P31-201ENST00000413333 ZNF837Q96EG3 531 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P31-201ENST00000413333 SPACA7Q96KW9 195 aa7.33□□□□□ -1.24
HMGB3P31-201ENST00000413333 CNTNAP3BQ96NU0 1288 aa7.33□□□□□ -1.24
HMGB3P31-201ENST00000413333 TCF12Q99081 682 aa7.33□□□□□ -1.24
HMGB3P31-201ENST00000413333 DNAJC2Q99543 621 aaKnown RBP7.33□□□□□ -1.24
HMGB3P31-201ENST00000413333 TRIM56Q9BRZ2 755 aaKnown RBP7.33□□□□□ -1.24
HMGB3P31-201ENST00000413333 CNTNAP3Q9BZ76 1288 aa7.33□□□□□ -1.24
HMGB3P31-201ENST00000413333 ABCB6Q9NP58 842 aa7.33□□□□□ -1.24
HMGB3P31-201ENST00000413333 KBTBD4Q9NVX7 518 aa7.33□□□□□ -1.24
HMGB3P31-201ENST00000413333 KIF4AO95239 1232 aa7.32□□□□□ -1.24
HMGB3P31-201ENST00000413333 FGFR3P22607 806 aa7.32□□□□□ -1.24
HMGB3P31-201ENST00000413333 SOX18P35713 384 aa7.32□□□□□ -1.24
HMGB3P31-201ENST00000413333 PAK2Q13177 524 aa7.32□□□□□ -1.24
HMGB3P31-201ENST00000413333 NEUROD1Q13562 356 aa7.32□□□□□ -1.24
HMGB3P31-201ENST00000413333 PRPF40BQ6NWY9 871 aaKnown RBP7.32□□□□□ -1.24
HMGB3P31-201ENST00000413333 HFE2Q6ZVN8 426 aa7.32□□□□□ -1.24
HMGB3P31-201ENST00000413333 ERMP1Q7Z2K6 904 aa7.32□□□□□ -1.24
HMGB3P31-201ENST00000413333 NOC4LQ9BVI4 516 aaKnown RBP7.32□□□□□ -1.24
HMGB3P31-201ENST00000413333 EFCC1Q9HA90 598 aa7.32□□□□□ -1.24
HMGB3P31-201ENST00000413333 SENP2Q9HC62 589 aa7.32□□□□□ -1.24
HMGB3P31-201ENST00000413333 ATXN7L1Q9ULK2 861 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P31-201ENST00000413333 CDC14CA4D256 554 aa7.31□□□□□ -1.24
HMGB3P31-201ENST00000413333 METTL12A8MUP2 240 aa7.31□□□□□ -1.24
HMGB3P31-201ENST00000413333 J3QW42 95 aa7.31□□□□□ -1.24
HMGB3P31-201ENST00000413333 GPR25O00155 361 aa7.31□□□□□ -1.24
HMGB3P31-201ENST00000413333 MAP3K6O95382 1288 aa7.31□□□□□ -1.24
HMGB3P31-201ENST00000413333 XRCC5P13010 732 aaKnown RBP7.31□□□□□ -1.24
HMGB3P31-201ENST00000413333 ITGA6P23229 1130 aa7.31□□□□□ -1.24
HMGB3P31-201ENST00000413333 GBP2P32456 591 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P31-201ENST00000413333 TPTE2Q6XPS3 522 aa7.31□□□□□ -1.24
HMGB3P31-201ENST00000413333 CCNJLQ8IV13 435 aa7.31□□□□□ -1.24
HMGB3P31-201ENST00000413333 CEP120Q8N960 986 aa7.31□□□□□ -1.24
HMGB3P31-201ENST00000413333 ASAP3Q8TDY4 903 aa7.31□□□□□ -1.24
HMGB3P31-201ENST00000413333 KIFC2Q96AC6 838 aa7.31□□□□□ -1.24
HMGB3P31-201ENST00000413333 HHIPQ96QV1 700 aa7.31□□□□□ -1.24
HMGB3P31-201ENST00000413333 RSRP1Q9BUV0 290 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms