RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 DDX46Q7L014 1031 aaKnown RBP22.42■■□□□ 1.18
TNFRSF8-202ENST00000413146 PGBD1Q96JS3 809 aa22.42■■□□□ 1.18
TNFRSF8-202ENST00000413146 MEGF6O75095 1541 aa22.42■■□□□ 1.18
TNFRSF8-202ENST00000413146 DDX11Q96FC9 970 aa22.42■■□□□ 1.18
TNFRSF8-202ENST00000413146 FMNL2Q96PY5 1086 aa22.42■■□□□ 1.18
TNFRSF8-202ENST00000413146 CFAP45Q9UL16 551 aa22.42■■□□□ 1.18
TNFRSF8-202ENST00000413146 KIF3AQ9Y496 699 aa22.42■■□□□ 1.18
TNFRSF8-202ENST00000413146 PTGS1P23219 599 aa22.41■■□□□ 1.18
TNFRSF8-202ENST00000413146 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.41■■□□□ 1.18
TNFRSF8-202ENST00000413146 ALS2Q96Q42 1657 aa22.41■■□□□ 1.18
TNFRSF8-202ENST00000413146 LAMA4Q16363 1823 aa22.41■■□□□ 1.18
TNFRSF8-202ENST00000413146 ATP5J2-PTCD1G3V325 749 aa22.41■■□□□ 1.18
TNFRSF8-202ENST00000413146 PTCD1O75127 700 aaKnown RBP22.41■■□□□ 1.18
TNFRSF8-202ENST00000413146 CHGBP05060 677 aa22.41■■□□□ 1.18
TNFRSF8-202ENST00000413146 MYH15Q9Y2K3 1946 aa22.4■■□□□ 1.18
TNFRSF8-202ENST00000413146 SH3TC1Q8TE82 1336 aa22.4■■□□□ 1.18
TNFRSF8-202ENST00000413146 HMGB1P09429 215 aaKnown RBP22.4■■□□□ 1.18
TNFRSF8-202ENST00000413146 DRC7Q8IY82 874 aa22.4■■□□□ 1.18
TNFRSF8-202ENST00000413146 KBTBD3Q8NAB2 608 aa22.4■■□□□ 1.18
TNFRSF8-202ENST00000413146 ARID3AQ99856 593 aa22.4■■□□□ 1.18
TNFRSF8-202ENST00000413146 LLPHQ9BRT6 129 aaKnown RBP22.4■■□□□ 1.18
TNFRSF8-202ENST00000413146 MST1RQ04912 1400 aa22.39■■□□□ 1.18
TNFRSF8-202ENST00000413146 SCRN1Q12765 414 aa22.39■■□□□ 1.18
TNFRSF8-202ENST00000413146 TDRD7Q8NHU6 1098 aaKnown RBP22.39■■□□□ 1.18
TNFRSF8-202ENST00000413146 DCAF5Q96JK2 942 aa22.39■■□□□ 1.18
TNFRSF8-202ENST00000413146 LRRC2Q9BYS8 371 aa22.39■■□□□ 1.18
TNFRSF8-202ENST00000413146 TRIM5Q9C035 493 aa22.39■■□□□ 1.18
TNFRSF8-202ENST00000413146 ZNF165P49910 485 aa22.39■■□□□ 1.17
TNFRSF8-202ENST00000413146 C1orf167Q5SNV9 1468 aa22.39■■□□□ 1.17
TNFRSF8-202ENST00000413146 PALLDQ8WX93 1383 aa22.38■■□□□ 1.17
TNFRSF8-202ENST00000413146 CSB-PGBD3P0DP91 1061 aa22.38■■□□□ 1.17
TNFRSF8-202ENST00000413146 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.38■■□□□ 1.17
TNFRSF8-202ENST00000413146 SMARCC2Q8TAQ2 1214 aa22.38■■□□□ 1.17
TNFRSF8-202ENST00000413146 TSC1Q92574 1164 aa22.38■■□□□ 1.17
TNFRSF8-202ENST00000413146 CCDC9Q9Y3X0 531 aaKnown RBP22.38■■□□□ 1.17
TNFRSF8-202ENST00000413146 LAMB4A4D0S4 1761 aa22.38■■□□□ 1.17
TNFRSF8-202ENST00000413146 PFKFB2O60825 505 aa22.38■■□□□ 1.17
TNFRSF8-202ENST00000413146 LMBR1LQ6UX01 489 aa22.38■■□□□ 1.17
TNFRSF8-202ENST00000413146 DNAJC25Q9H1X3 360 aa22.38■■□□□ 1.17
TNFRSF8-202ENST00000413146 ABCC6O95255 1503 aa22.37■■□□□ 1.17
TNFRSF8-202ENST00000413146 CAVIN2O95810 425 aa22.37■■□□□ 1.17
TNFRSF8-202ENST00000413146 ZNF75DP51815 510 aa22.37■■□□□ 1.17
TNFRSF8-202ENST00000413146 STOX1Q6ZVD7 989 aa22.37■■□□□ 1.17
TNFRSF8-202ENST00000413146 CCDC186Q7Z3E2 898 aa22.37■■□□□ 1.17
TNFRSF8-202ENST00000413146 PLA2G4DQ86XP0 818 aa22.37■■□□□ 1.17
TNFRSF8-202ENST00000413146 PLBD2Q8NHP8 589 aa22.37■■□□□ 1.17
TNFRSF8-202ENST00000413146 CASP7P55210 303 aa22.36■■□□□ 1.17
TNFRSF8-202ENST00000413146 DHX32Q7L7V1 743 aaKnown RBP22.36■■□□□ 1.17
TNFRSF8-202ENST00000413146 NAA16Q6N069 864 aaPredicted RBP22.36■■□□□ 1.17
TNFRSF8-202ENST00000413146 ZNF710Q8N1W2 664 aa22.36■■□□□ 1.17
TNFRSF8-202ENST00000413146 PROSER2Q86WR7 435 aaPredicted RBP22.35■■□□□ 1.17
TNFRSF8-202ENST00000413146 NSUN7Q8NE18 718 aaKnown RBP22.35■■□□□ 1.17
TNFRSF8-202ENST00000413146 NEUROD6Q96NK8 337 aa22.35■■□□□ 1.17
TNFRSF8-202ENST00000413146 HELLSQ9NRZ9 838 aa22.35■■□□□ 1.17
TNFRSF8-202ENST00000413146 PAG1Q9NWQ8 432 aa22.35■■□□□ 1.17
TNFRSF8-202ENST00000413146 GOLIM4O00461 696 aa22.35■■□□□ 1.17
TNFRSF8-202ENST00000413146 CEBPZQ03701 1054 aaKnown RBP22.35■■□□□ 1.17
TNFRSF8-202ENST00000413146 CCDC94Q9BW85 323 aaPredicted RBP22.35■■□□□ 1.17
TNFRSF8-202ENST00000413146 DSCC1Q9BVC3 393 aa22.34■■□□□ 1.17
TNFRSF8-202ENST00000413146 PTPDC1A2A3K4 754 aa22.34■■□□□ 1.17
TNFRSF8-202ENST00000413146 CYP27B1O15528 508 aa22.34■■□□□ 1.17
TNFRSF8-202ENST00000413146 CABP4P57796 275 aa22.34■■□□□ 1.17
TNFRSF8-202ENST00000413146 FOSBP53539 338 aa22.33■■□□□ 1.17
TNFRSF8-202ENST00000413146 APOBRQ0VD83 1088 aa22.33■■□□□ 1.17
TNFRSF8-202ENST00000413146 PKD1L3Q7Z443 1732 aa22.33■■□□□ 1.17
TNFRSF8-202ENST00000413146 COL18A1P39060 1754 aa22.33■■□□□ 1.16
TNFRSF8-202ENST00000413146 RIOK3O14730 519 aaKnown RBP22.33■■□□□ 1.16
TNFRSF8-202ENST00000413146 PLEKHG2Q9H7P9 1386 aa22.33■■□□□ 1.16
TNFRSF8-202ENST00000413146 CTAGE5O15320 804 aa22.32■■□□□ 1.16
TNFRSF8-202ENST00000413146 FOXO4P98177 505 aa22.32■■□□□ 1.16
TNFRSF8-202ENST00000413146 BCL2L12Q9HB09 334 aa22.32■■□□□ 1.16
TNFRSF8-202ENST00000413146 NRBP1Q9UHY1 535 aa22.32■■□□□ 1.16
TNFRSF8-202ENST00000413146 GOLGA6L19H0YKK7 550 aa22.32■■□□□ 1.16
TNFRSF8-202ENST00000413146 LRMPQ12912 555 aa22.32■■□□□ 1.16
TNFRSF8-202ENST00000413146 ZSCAN25Q6NSZ9 544 aa22.32■■□□□ 1.16
TNFRSF8-202ENST00000413146 CCAR1Q8IX12 1150 aaKnown RBP22.32■■□□□ 1.16
TNFRSF8-202ENST00000413146 CLIP2Q9UDT6 1046 aa22.32■■□□□ 1.16
TNFRSF8-202ENST00000413146 FAM177BA6PVY3 158 aa22.31■■□□□ 1.16
TNFRSF8-202ENST00000413146 CTDNEP1O95476 244 aa22.31■■□□□ 1.16
TNFRSF8-202ENST00000413146 ADD1P35611 737 aaKnown RBP22.31■■□□□ 1.16
TNFRSF8-202ENST00000413146 CCDC73Q6ZRK6 1079 aa22.31■■□□□ 1.16
TNFRSF8-202ENST00000413146 ATG9AQ7Z3C6 839 aa22.31■■□□□ 1.16
TNFRSF8-202ENST00000413146 TICAM2Q86XR7 235 aa22.31■■□□□ 1.16
TNFRSF8-202ENST00000413146 GPR108Q9NPR9 543 aa22.31■■□□□ 1.16
TNFRSF8-202ENST00000413146 RCOR1Q9UKL0 485 aa22.31■■□□□ 1.16
TNFRSF8-202ENST00000413146 GLI3P10071 1580 aa22.31■■□□□ 1.16
TNFRSF8-202ENST00000413146 H7C1W4 665 aa22.31■■□□□ 1.16
TNFRSF8-202ENST00000413146 ZMYM1Q5SVZ6 1142 aa22.31■■□□□ 1.16
TNFRSF8-202ENST00000413146 ZNF396Q96N95 335 aaPredicted RBP22.31■■□□□ 1.16
TNFRSF8-202ENST00000413146 NAP1L2Q9ULW6 460 aaPredicted RBP22.31■■□□□ 1.16
TNFRSF8-202ENST00000413146 CDC25BP30305 580 aa22.3■■□□□ 1.16
TNFRSF8-202ENST00000413146 CCT2P78371 535 aaKnown RBP22.3■■□□□ 1.16
TNFRSF8-202ENST00000413146 EXOSC10Q01780 885 aaKnown RBP22.3■■□□□ 1.16
TNFRSF8-202ENST00000413146 STX1AQ16623 288 aa22.3■■□□□ 1.16
TNFRSF8-202ENST00000413146 SLFNL1Q499Z3 407 aa22.3■■□□□ 1.16
TNFRSF8-202ENST00000413146 AGXT2Q9BYV1 514 aa22.3■■□□□ 1.16
TNFRSF8-202ENST00000413146 C19orf44Q9H6X5 657 aa22.3■■□□□ 1.16
TNFRSF8-202ENST00000413146 E7EWF7 191 aa22.3■■□□□ 1.16
TNFRSF8-202ENST00000413146 IL15P40933 162 aaPredicted RBP22.3■■□□□ 1.16
TNFRSF8-202ENST00000413146 HSPA2P54652 639 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms