RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 ZNF34Q8IZ26 560 aa29.39■■■□□ 2.3
VRK2-202ENST00000412104 LOC102724428A0A0B4J2F2 783 aa29.39■■■□□ 2.3
VRK2-202ENST00000412104 SIK1P57059 783 aa29.39■■■□□ 2.3
VRK2-202ENST00000412104 TSGA10IPQ3SY00 556 aa29.39■■■□□ 2.3
VRK2-202ENST00000412104 TAF6LQ9Y6J9 622 aa29.39■■■□□ 2.3
VRK2-202ENST00000412104 DDX49Q9Y6V7 483 aaKnown RBP29.39■■■□□ 2.3
VRK2-202ENST00000412104 CRKLP46109 303 aaKnown RBP29.38■■■□□ 2.29
VRK2-202ENST00000412104 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.38■■■□□ 2.29
VRK2-202ENST00000412104 ADORA1P30542 326 aa29.37■■■□□ 2.29
VRK2-202ENST00000412104 XAGE2Q96GT9 111 aa29.37■■■□□ 2.29
VRK2-202ENST00000412104 ZSCAN31Q96LW9 406 aaPredicted RBP29.37■■■□□ 2.29
VRK2-202ENST00000412104 SH2B1Q9NRF2 756 aaPredicted RBP29.37■■■□□ 2.29
VRK2-202ENST00000412104 ANKRD18BA2A2Z9 1011 aa29.36■■■□□ 2.29
VRK2-202ENST00000412104 PDE8AO60658 829 aa29.36■■■□□ 2.29
VRK2-202ENST00000412104 COL9A3Q14050 684 aaPredicted RBP29.36■■■□□ 2.29
VRK2-202ENST00000412104 CCDC158Q5M9N0 1113 aa29.36■■■□□ 2.29
VRK2-202ENST00000412104 BLOC1S2Q6QNY1 142 aa29.36■■■□□ 2.29
VRK2-202ENST00000412104 CHAMP1Q96JM3 812 aa29.36■■■□□ 2.29
VRK2-202ENST00000412104 HELLSQ9NRZ9 838 aa29.36■■■□□ 2.29
VRK2-202ENST00000412104 BRPF3Q9ULD4 1205 aa29.36■■■□□ 2.29
VRK2-202ENST00000412104 ITPK1Q13572 414 aa29.35■■■□□ 2.29
VRK2-202ENST00000412104 RIPOR2Q9Y4F9 1068 aa29.35■■■□□ 2.29
VRK2-202ENST00000412104 U3KPZ7 1027 aaPredicted RBP29.35■■■□□ 2.29
VRK2-202ENST00000412104 MYH14Q7Z406 1995 aaKnown RBP29.35■■■□□ 2.29
VRK2-202ENST00000412104 TTC39AQ5SRH9 613 aa29.35■■■□□ 2.29
VRK2-202ENST00000412104 WDR33Q9C0J8 1336 aaKnown RBP29.34■■■□□ 2.29
VRK2-202ENST00000412104 RPS6KB1P23443 525 aa29.34■■■□□ 2.29
VRK2-202ENST00000412104 ZMYM1Q5SVZ6 1142 aa29.34■■■□□ 2.29
VRK2-202ENST00000412104 GORABQ5T7V8 394 aa29.34■■■□□ 2.29
VRK2-202ENST00000412104 LDHAL6AQ6ZMR3 332 aa29.34■■■□□ 2.29
VRK2-202ENST00000412104 LRP5O75197 1615 aa29.34■■■□□ 2.29
VRK2-202ENST00000412104 SLFNL1Q499Z3 407 aa29.33■■■□□ 2.29
VRK2-202ENST00000412104 METTL24Q5JXM2 366 aa29.33■■■□□ 2.29
VRK2-202ENST00000412104 CCDC83Q8IWF9 413 aa29.33■■■□□ 2.29
VRK2-202ENST00000412104 PRPF40AO75400 957 aaKnown RBP29.33■■■□□ 2.29
VRK2-202ENST00000412104 KRT32Q14532 448 aa29.33■■■□□ 2.29
VRK2-202ENST00000412104 SMC3Q9UQE7 1217 aa29.33■■■□□ 2.29
VRK2-202ENST00000412104 COL5A3P25940 1745 aaPredicted RBP29.32■■■□□ 2.28
VRK2-202ENST00000412104 ME3Q16798 604 aa29.32■■■□□ 2.28
VRK2-202ENST00000412104 ATP2B3Q16720 1220 aa29.32■■■□□ 2.28
VRK2-202ENST00000412104 ALDH8A1Q9H2A2 487 aaPredicted RBP29.32■■■□□ 2.28
VRK2-202ENST00000412104 TPCN1Q9ULQ1 816 aa29.32■■■□□ 2.28
VRK2-202ENST00000412104 ISY1Q9ULR0 285 aaKnown RBP29.32■■■□□ 2.28
VRK2-202ENST00000412104 RNF113AO15541 343 aaKnown RBP29.31■■■□□ 2.28
VRK2-202ENST00000412104 FKBP4Q02790 459 aaKnown RBP eCLIP29.31■■■□□ 2.28
VRK2-202ENST00000412104 ST3GAL1Q11201 340 aa29.31■■■□□ 2.28
VRK2-202ENST00000412104 CNNM1Q9NRU3 951 aa29.31■■■□□ 2.28
VRK2-202ENST00000412104 ABCC12Q96J65 1359 aa29.3■■■□□ 2.28
VRK2-202ENST00000412104 FAM98CQ17RN3 349 aaKnown RBP29.3■■■□□ 2.28
VRK2-202ENST00000412104 SMARCC1Q92922 1105 aaPredicted RBP29.3■■■□□ 2.28
VRK2-202ENST00000412104 BCL9LQ86UU0 1499 aa29.3■■■□□ 2.28
VRK2-202ENST00000412104 KCNQ2O43526 872 aa29.3■■■□□ 2.28
VRK2-202ENST00000412104 CAMTA2O94983 1202 aa29.3■■■□□ 2.28
VRK2-202ENST00000412104 ANKRD1Q15327 319 aa29.3■■■□□ 2.28
VRK2-202ENST00000412104 TCEANC2Q96MN5 208 aa29.3■■■□□ 2.28
VRK2-202ENST00000412104 CYP21A2P08686 494 aa29.29■■■□□ 2.28
VRK2-202ENST00000412104 SUSD4Q5VX71 490 aa29.29■■■□□ 2.28
VRK2-202ENST00000412104 VGLL2Q8N8G2 317 aa29.29■■■□□ 2.28
VRK2-202ENST00000412104 AK7Q96M32 723 aa29.29■■■□□ 2.28
VRK2-202ENST00000412104 MAST3O60307 1309 aa29.29■■■□□ 2.28
VRK2-202ENST00000412104 UBAP1LF5GYI3 381 aa29.28■■■□□ 2.28
VRK2-202ENST00000412104 XRCC6P12956 609 aaKnown RBP eCLIP29.28■■■□□ 2.28
VRK2-202ENST00000412104 SCARF1Q14162 830 aa29.28■■■□□ 2.28
VRK2-202ENST00000412104 C8orf37Q96NL8 207 aa29.28■■■□□ 2.28
VRK2-202ENST00000412104 DSCC1Q9BVC3 393 aa29.28■■■□□ 2.28
VRK2-202ENST00000412104 ZNF831Q5JPB2 1677 aa29.28■■■□□ 2.28
VRK2-202ENST00000412104 TOB2Q14106 344 aaPredicted RBP29.28■■■□□ 2.28
VRK2-202ENST00000412104 DDX60Q8IY21 1712 aaKnown RBP29.27■■■□□ 2.28
VRK2-202ENST00000412104 SYT1P21579 422 aa29.27■■■□□ 2.28
VRK2-202ENST00000412104 NEK1Q96PY6 1258 aa29.27■■■□□ 2.28
VRK2-202ENST00000412104 BCORQ6W2J9 1755 aa29.26■■■□□ 2.28
VRK2-202ENST00000412104 STX6O43752 255 aa29.26■■■□□ 2.27
VRK2-202ENST00000412104 GJB2P29033 226 aa29.26■■■□□ 2.27
VRK2-202ENST00000412104 VPS72Q15906 364 aa29.26■■■□□ 2.27
VRK2-202ENST00000412104 NECAB1Q8N987 351 aa29.26■■■□□ 2.27
VRK2-202ENST00000412104 GPT2Q8TD30 523 aa29.26■■■□□ 2.27
VRK2-202ENST00000412104 MYH7P12883 1935 aa29.26■■■□□ 2.27
VRK2-202ENST00000412104 MRE11P49959 708 aa29.26■■■□□ 2.27
VRK2-202ENST00000412104 UTP14AQ9BVJ6 771 aaKnown RBP29.26■■■□□ 2.27
VRK2-202ENST00000412104 LAMB2P55268 1798 aa29.25■■■□□ 2.27
VRK2-202ENST00000412104 LAMA4Q16363 1823 aa29.25■■■□□ 2.27
VRK2-202ENST00000412104 ZSCAN22P10073 491 aaPredicted RBP29.25■■■□□ 2.27
VRK2-202ENST00000412104 NCLP19338 710 aaKnown RBP29.25■■■□□ 2.27
VRK2-202ENST00000412104 LRRFIP1Q32MZ4 808 aaKnown RBP29.25■■■□□ 2.27
VRK2-202ENST00000412104 NGLY1Q96IV0 654 aa29.25■■■□□ 2.27
VRK2-202ENST00000412104 AKAP11Q9UKA4 1901 aa29.25■■■□□ 2.27
VRK2-202ENST00000412104 M0R2C6 588 aa29.24■■■□□ 2.27
VRK2-202ENST00000412104 HCLS1P14317 486 aaPredicted RBP29.24■■■□□ 2.27
VRK2-202ENST00000412104 ZAP70P43403 619 aa29.24■■■□□ 2.27
VRK2-202ENST00000412104 PARP10Q53GL7 1025 aa29.24■■■□□ 2.27
VRK2-202ENST00000412104 GAS2L3Q86XJ1 694 aa29.24■■■□□ 2.27
VRK2-202ENST00000412104 ARAP2Q8WZ64 1704 aa29.24■■■□□ 2.27
VRK2-202ENST00000412104 PDE8BO95263 885 aa29.24■■■□□ 2.27
VRK2-202ENST00000412104 HSPD1P10809 573 aaKnown RBP29.24■■■□□ 2.27
VRK2-202ENST00000412104 CAVIN1Q6NZI2 390 aaKnown RBP29.24■■■□□ 2.27
VRK2-202ENST00000412104 GRPEL1Q9HAV7 217 aa29.24■■■□□ 2.27
VRK2-202ENST00000412104 FAM177BA6PVY3 158 aa29.23■■■□□ 2.27
VRK2-202ENST00000412104 ZFYP08048 801 aaPredicted RBP29.22■■■□□ 2.27
VRK2-202ENST00000412104 PI16Q6UXB8 463 aa29.22■■■□□ 2.27
VRK2-202ENST00000412104 OSBP2Q969R2 916 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms