RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 NMIQ13287 307 aaPredicted RBP10.46□□□□□ -0.73
PBRM1-208ENST00000410007 RAB11FIP4Q86YS3 637 aa10.46□□□□□ -0.73
PBRM1-208ENST00000410007 CCDC191Q8NCU4 936 aa10.46□□□□□ -0.73
PBRM1-208ENST00000410007 ALG1Q9BT22 464 aa10.46□□□□□ -0.73
PBRM1-208ENST00000410007 TFCP2Q12800 502 aa10.46□□□□□ -0.74
PBRM1-208ENST00000410007 CNBD1Q8NA66 436 aa10.46□□□□□ -0.74
PBRM1-208ENST00000410007 METTL22Q9BUU2 404 aaPredicted RBP10.46□□□□□ -0.74
PBRM1-208ENST00000410007 NEFHP12036 1026 aa10.46□□□□□ -0.74
PBRM1-208ENST00000410007 UBE2HP62256 183 aa10.46□□□□□ -0.74
PBRM1-208ENST00000410007 CKAP2LQ8IYA6 745 aa10.46□□□□□ -0.74
PBRM1-208ENST00000410007 HELBQ8NG08 1087 aaPredicted RBP10.46□□□□□ -0.74
PBRM1-208ENST00000410007 RBM17Q96I25 401 aaKnown RBP10.46□□□□□ -0.74
PBRM1-208ENST00000410007 LDHBP07195 334 aaKnown RBP10.45□□□□□ -0.74
PBRM1-208ENST00000410007 PICALMQ13492 652 aa10.45□□□□□ -0.74
PBRM1-208ENST00000410007 STX1AQ16623 288 aa10.45□□□□□ -0.74
PBRM1-208ENST00000410007 BICC1Q9H694 974 aaKnown RBP10.45□□□□□ -0.74
PBRM1-208ENST00000410007 SLC52A2Q9HAB3 445 aa10.45□□□□□ -0.74
PBRM1-208ENST00000410007 BRPF3Q9ULD4 1205 aa10.45□□□□□ -0.74
PBRM1-208ENST00000410007 SAMD9Q5K651 1589 aa10.45□□□□□ -0.74
PBRM1-208ENST00000410007 CHL1O00533 1208 aa10.45□□□□□ -0.74
PBRM1-208ENST00000410007 IBSPP21815 317 aaPredicted RBP10.45□□□□□ -0.74
PBRM1-208ENST00000410007 SMC5Q8IY18 1101 aa10.45□□□□□ -0.74
PBRM1-208ENST00000410007 SAMM50Q9Y512 469 aa10.45□□□□□ -0.74
PBRM1-208ENST00000410007 ZSCAN22P10073 491 aaPredicted RBP10.45□□□□□ -0.74
PBRM1-208ENST00000410007 SSR1P43307 286 aaKnown RBP10.45□□□□□ -0.74
PBRM1-208ENST00000410007 FAM114A1Q8IWE2 563 aa10.45□□□□□ -0.74
PBRM1-208ENST00000410007 STK32BQ9NY57 414 aa10.45□□□□□ -0.74
PBRM1-208ENST00000410007 EYA2O00167 538 aa10.45□□□□□ -0.74
PBRM1-208ENST00000410007 PRC1O43663 620 aa10.45□□□□□ -0.74
PBRM1-208ENST00000410007 NEBLO76041 1014 aa10.45□□□□□ -0.74
PBRM1-208ENST00000410007 NF2P35240 595 aa10.45□□□□□ -0.74
PBRM1-208ENST00000410007 MTIF2P46199 727 aaKnown RBP10.45□□□□□ -0.74
PBRM1-208ENST00000410007 DENND2AQ9ULE3 1009 aa10.45□□□□□ -0.74
PBRM1-208ENST00000410007 RTL9Q8NET4 1388 aa10.44□□□□□ -0.74
PBRM1-208ENST00000410007 RLBP1P12271 317 aa10.44□□□□□ -0.74
PBRM1-208ENST00000410007 SKIDA1Q1XH10 827 aa10.44□□□□□ -0.74
PBRM1-208ENST00000410007 KCNG4Q8TDN1 519 aa10.44□□□□□ -0.74
PBRM1-208ENST00000410007 MCM9Q9NXL9 1143 aa10.44□□□□□ -0.74
PBRM1-208ENST00000410007 ESPNB1AK53 854 aa10.44□□□□□ -0.74
PBRM1-208ENST00000410007 EIF3JO75822 258 aaKnown RBP10.44□□□□□ -0.74
PBRM1-208ENST00000410007 Q6ZUG5 572 aa10.44□□□□□ -0.74
PBRM1-208ENST00000410007 C16orf71Q8IYS4 520 aaPredicted RBP10.44□□□□□ -0.74
PBRM1-208ENST00000410007 NECAB1Q8N987 351 aa10.44□□□□□ -0.74
PBRM1-208ENST00000410007 FBXO3Q9UK99 471 aa10.44□□□□□ -0.74
PBRM1-208ENST00000410007 KAT6BQ8WYB5 2073 aa10.44□□□□□ -0.74
PBRM1-208ENST00000410007 YEATS4O95619 227 aa10.44□□□□□ -0.74
PBRM1-208ENST00000410007 SEPT7Q16181 437 aaKnown RBP10.44□□□□□ -0.74
PBRM1-208ENST00000410007 CCDC40Q4G0X9 1142 aa10.44□□□□□ -0.74
PBRM1-208ENST00000410007 LRRC2Q9BYS8 371 aa10.44□□□□□ -0.74
PBRM1-208ENST00000410007 CALML3P27482 149 aa10.44□□□□□ -0.74
PBRM1-208ENST00000410007 MAGEB6Q8N7X4 407 aa10.44□□□□□ -0.74
PBRM1-208ENST00000410007 FAM89AQ96GI7 184 aa10.44□□□□□ -0.74
PBRM1-208ENST00000410007 GDPD2Q9HCC8 539 aa10.44□□□□□ -0.74
PBRM1-208ENST00000410007 RMND1Q9NWS8 449 aa10.44□□□□□ -0.74
PBRM1-208ENST00000410007 PDE8AO60658 829 aa10.43□□□□□ -0.74
PBRM1-208ENST00000410007 TBCAO75347 108 aaKnown RBP10.43□□□□□ -0.74
PBRM1-208ENST00000410007 NEMFO60524 1076 aa10.43□□□□□ -0.74
PBRM1-208ENST00000410007 TTC6Q86TZ1 520 aa10.43□□□□□ -0.74
PBRM1-208ENST00000410007 ZSCAN30Q86W11 494 aa10.43□□□□□ -0.74
PBRM1-208ENST00000410007 TCEANC2Q96MN5 208 aa10.43□□□□□ -0.74
PBRM1-208ENST00000410007 PANK2Q9BZ23 570 aa10.43□□□□□ -0.74
PBRM1-208ENST00000410007 CFAP74Q9C0B2 1584 aa10.43□□□□□ -0.74
PBRM1-208ENST00000410007 VEZTQ9HBM0 779 aa10.43□□□□□ -0.74
PBRM1-208ENST00000410007 CWC15Q9P013 229 aaKnown RBP10.43□□□□□ -0.74
PBRM1-208ENST00000410007 KIF5CO60282 957 aa10.43□□□□□ -0.74
PBRM1-208ENST00000410007 USO1O60763 962 aaKnown RBP10.43□□□□□ -0.74
PBRM1-208ENST00000410007 HEATR3Q7Z4Q2 680 aa10.43□□□□□ -0.74
PBRM1-208ENST00000410007 CCDC87Q9NVE4 849 aa10.43□□□□□ -0.74
PBRM1-208ENST00000410007 CLIP2Q9UDT6 1046 aa10.43□□□□□ -0.74
PBRM1-208ENST00000410007 PTPRTO14522 1441 aa10.43□□□□□ -0.74
PBRM1-208ENST00000410007 CCDC171Q6TFL3 1326 aa10.43□□□□□ -0.74
PBRM1-208ENST00000410007 B4DLN1 442 aa10.43□□□□□ -0.74
PBRM1-208ENST00000410007 PRKCSHP14314 528 aaPredicted RBP10.43□□□□□ -0.74
PBRM1-208ENST00000410007 MRPL12P52815 198 aaKnown RBP10.43□□□□□ -0.74
PBRM1-208ENST00000410007 NUP88Q99567 741 aaPredicted RBP10.43□□□□□ -0.74
PBRM1-208ENST00000410007 C6orf50Q9HD87 102 aa10.43□□□□□ -0.74
PBRM1-208ENST00000410007 LTKP29376 864 aa10.42□□□□□ -0.74
PBRM1-208ENST00000410007 SYKP43405 635 aa10.42□□□□□ -0.74
PBRM1-208ENST00000410007 NAPAP54920 295 aa10.42□□□□□ -0.74
PBRM1-208ENST00000410007 GSDMDP57764 484 aa10.42□□□□□ -0.74
PBRM1-208ENST00000410007 TCERG1LQ5VWI1 586 aa10.42□□□□□ -0.74
PBRM1-208ENST00000410007 G2E3Q7L622 706 aa10.42□□□□□ -0.74
PBRM1-208ENST00000410007 SYCP3Q8IZU3 236 aa10.42□□□□□ -0.74
PBRM1-208ENST00000410007 TNNQ9UQP3 1299 aa10.42□□□□□ -0.74
PBRM1-208ENST00000410007 BIN1O00499 593 aa10.42□□□□□ -0.74
PBRM1-208ENST00000410007 PPFIA3O75145 1194 aa10.42□□□□□ -0.74
PBRM1-208ENST00000410007 ITGA6P23229 1130 aa10.42□□□□□ -0.74
PBRM1-208ENST00000410007 PRIM1P49642 420 aaKnown RBP10.42□□□□□ -0.74
PBRM1-208ENST00000410007 PTPN14Q15678 1187 aa10.42□□□□□ -0.74
PBRM1-208ENST00000410007 TDRD12Q587J7 1177 aaKnown RBP10.42□□□□□ -0.74
PBRM1-208ENST00000410007 HELLSQ9NRZ9 838 aa10.42□□□□□ -0.74
PBRM1-208ENST00000410007 ARHGEF5Q12774 1597 aa10.42□□□□□ -0.74
PBRM1-208ENST00000410007 ZBTB7BO15156 539 aaPredicted RBP10.42□□□□□ -0.74
PBRM1-208ENST00000410007 ZNF165P49910 485 aa10.42□□□□□ -0.74
PBRM1-208ENST00000410007 PLEKHM2Q8IWE5 1019 aa10.42□□□□□ -0.74
PBRM1-208ENST00000410007 MIGA1Q8NAN2 632 aa10.42□□□□□ -0.74
PBRM1-208ENST00000410007 LGR6Q9HBX8 967 aa10.42□□□□□ -0.74
PBRM1-208ENST00000410007 RIMBP2O15034 1052 aa10.41□□□□□ -0.74
PBRM1-208ENST00000410007 MYCNP04198 464 aaPredicted RBP10.41□□□□□ -0.74
PBRM1-208ENST00000410007 TNNI2P48788 182 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms