RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 XAGE3Q8WTP9 111 aa9.26□□□□□ -0.93
EPHA4-203ENST00000409938 RCOR1Q9UKL0 485 aa9.26□□□□□ -0.93
EPHA4-203ENST00000409938 RIOK3O14730 519 aaKnown RBP9.26□□□□□ -0.93
EPHA4-203ENST00000409938 PHKG2P15735 406 aa9.26□□□□□ -0.93
EPHA4-203ENST00000409938 TFCP2Q12800 502 aa9.26□□□□□ -0.93
EPHA4-203ENST00000409938 SIL1Q9H173 461 aa9.26□□□□□ -0.93
EPHA4-203ENST00000409938 C4AP0C0L4 1744 aa9.25□□□□□ -0.93
EPHA4-203ENST00000409938 C4BP0C0L5 1744 aa9.25□□□□□ -0.93
EPHA4-203ENST00000409938 KCNJ4P48050 445 aa9.25□□□□□ -0.93
EPHA4-203ENST00000409938 SNW1Q13573 536 aaKnown RBP9.25□□□□□ -0.93
EPHA4-203ENST00000409938 ZSCAN25Q6NSZ9 544 aa9.25□□□□□ -0.93
EPHA4-203ENST00000409938 Q6ZUG5 572 aa9.25□□□□□ -0.93
EPHA4-203ENST00000409938 NSUN7Q8NE18 718 aaKnown RBP9.25□□□□□ -0.93
EPHA4-203ENST00000409938 ENGASEQ8NFI3 743 aa9.25□□□□□ -0.93
EPHA4-203ENST00000409938 BRF1Q92994 677 aa9.25□□□□□ -0.93
EPHA4-203ENST00000409938 ORAI2Q96SN7 254 aa9.25□□□□□ -0.93
EPHA4-203ENST00000409938 KCND1Q9NSA2 647 aa9.25□□□□□ -0.93
EPHA4-203ENST00000409938 TFIP11Q9UBB9 837 aaKnown RBP9.25□□□□□ -0.93
EPHA4-203ENST00000409938 CHGBP05060 677 aa9.25□□□□□ -0.93
EPHA4-203ENST00000409938 MCMDC2Q4G0Z9 681 aa9.25□□□□□ -0.93
EPHA4-203ENST00000409938 DNTTIP2Q5QJE6 756 aaKnown RBP9.25□□□□□ -0.93
EPHA4-203ENST00000409938 C1orf167Q5SNV9 1468 aa9.25□□□□□ -0.93
EPHA4-203ENST00000409938 COPS6Q7L5N1 327 aa9.25□□□□□ -0.93
EPHA4-203ENST00000409938 RIC3Q7Z5B4 369 aa9.25□□□□□ -0.93
EPHA4-203ENST00000409938 ANKLE2Q86XL3 938 aa9.25□□□□□ -0.93
EPHA4-203ENST00000409938 CKAP2LQ8IYA6 745 aa9.25□□□□□ -0.93
EPHA4-203ENST00000409938 DNAJC5Q9H3Z4 198 aa9.25□□□□□ -0.93
EPHA4-203ENST00000409938 EVCP57679 992 aa9.24□□□□□ -0.93
EPHA4-203ENST00000409938 ILDR1Q86SU0 546 aaPredicted RBP9.24□□□□□ -0.93
EPHA4-203ENST00000409938 SPC24Q8NBT2 197 aa9.24□□□□□ -0.93
EPHA4-203ENST00000409938 MYD88Q99836 296 aa9.24□□□□□ -0.93
EPHA4-203ENST00000409938 GPR108Q9NPR9 543 aa9.24□□□□□ -0.93
EPHA4-203ENST00000409938 RBM6P78332 1123 aaKnown RBP9.24□□□□□ -0.93
EPHA4-203ENST00000409938 FOXO4P98177 505 aa9.24□□□□□ -0.93
EPHA4-203ENST00000409938 NEXNQ0ZGT2 675 aa9.24□□□□□ -0.93
EPHA4-203ENST00000409938 AIMP1Q12904 312 aaKnown RBP9.24□□□□□ -0.93
EPHA4-203ENST00000409938 ATL3Q6DD88 541 aa9.24□□□□□ -0.93
EPHA4-203ENST00000409938 KBTBD3Q8NAB2 608 aa9.24□□□□□ -0.93
EPHA4-203ENST00000409938 DSCC1Q9BVC3 393 aa9.24□□□□□ -0.93
EPHA4-203ENST00000409938 NRBP1Q9UHY1 535 aa9.24□□□□□ -0.93
EPHA4-203ENST00000409938 SHANK3Q9BYB0 1731 aa9.24□□□□□ -0.93
EPHA4-203ENST00000409938 ZSCAN20P17040 1043 aaPredicted RBP9.24□□□□□ -0.93
EPHA4-203ENST00000409938 SLC39A6Q13433 755 aa9.24□□□□□ -0.93
EPHA4-203ENST00000409938 UTP14CQ5TAP6 766 aaKnown RBP9.24□□□□□ -0.93
EPHA4-203ENST00000409938 ANKRD13DQ6ZTN6 518 aa9.24□□□□□ -0.93
EPHA4-203ENST00000409938 ATG9AQ7Z3C6 839 aa9.24□□□□□ -0.93
EPHA4-203ENST00000409938 CCDC186Q7Z3E2 898 aa9.24□□□□□ -0.93
EPHA4-203ENST00000409938 ZNF496Q96IT1 587 aaPredicted RBP9.24□□□□□ -0.93
EPHA4-203ENST00000409938 SEC62Q99442 399 aaKnown RBP9.24□□□□□ -0.93
EPHA4-203ENST00000409938 DBNDD2Q9BQY9 259 aa9.24□□□□□ -0.93
EPHA4-203ENST00000409938 KCPQ6ZWJ8 1503 aa9.24□□□□□ -0.93
EPHA4-203ENST00000409938 NEDD4P46934 1319 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 MYH7P12883 1935 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 HMGB1P09429 215 aaKnown RBP9.23□□□□□ -0.93
EPHA4-203ENST00000409938 LRMPQ12912 555 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 CCDC144BQ3MJ40 725 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 CCDC129Q6ZRS4 1044 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 CCDC144CPQ8IYA2 1237 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 MRFAP1L1Q96HT8 127 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 GOLPH3LQ9H4A5 285 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 HELLSQ9NRZ9 838 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 CFAP45Q9UL16 551 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 ECM29Q5VYK3 1845 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 ZNF165P49910 485 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 STK3Q13188 491 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 TPRNQ4KMQ1 711 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 RBM33Q96EV2 1170 aaKnown RBP9.23□□□□□ -0.93
EPHA4-203ENST00000409938 H7C1W4 665 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 CTAGE5O15320 804 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 ATP2B3Q16720 1220 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 DHX32Q7L7V1 743 aaKnown RBP9.23□□□□□ -0.93
EPHA4-203ENST00000409938 DHX40Q8IX18 779 aaKnown RBP9.23□□□□□ -0.93
EPHA4-203ENST00000409938 CACTINQ8WUQ7 758 aaKnown RBP9.23□□□□□ -0.93
EPHA4-203ENST00000409938 DNAJC25Q9H1X3 360 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 USP16Q9Y5T5 823 aa9.23□□□□□ -0.93
EPHA4-203ENST00000409938 SMTNL1A8MU46 457 aa9.22□□□□□ -0.93
EPHA4-203ENST00000409938 SNRPA1P09661 255 aaKnown RBP9.22□□□□□ -0.93
EPHA4-203ENST00000409938 DMTNQ08495 405 aa9.22□□□□□ -0.93
EPHA4-203ENST00000409938 ZMYM1Q5SVZ6 1142 aa9.22□□□□□ -0.93
EPHA4-203ENST00000409938 C11orf57Q6ZUT1 292 aaPredicted RBP9.22□□□□□ -0.93
EPHA4-203ENST00000409938 NFATC2IPQ8NCF5 419 aa9.22□□□□□ -0.93
EPHA4-203ENST00000409938 MYL6BP14649 208 aa9.22□□□□□ -0.93
EPHA4-203ENST00000409938 NCBP1Q09161 790 aaKnown RBP9.22□□□□□ -0.93
EPHA4-203ENST00000409938 NDUFB9Q9Y6M9 179 aa9.22□□□□□ -0.93
EPHA4-203ENST00000409938 NYAP1Q6ZVC0 841 aa9.21□□□□□ -0.93
EPHA4-203ENST00000409938 RGS22Q8NE09 1264 aa9.21□□□□□ -0.93
EPHA4-203ENST00000409938 PLBD2Q8NHP8 589 aa9.21□□□□□ -0.93
EPHA4-203ENST00000409938 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.21□□□□□ -0.93
EPHA4-203ENST00000409938 DDX11Q96FC9 970 aa9.21□□□□□ -0.93
EPHA4-203ENST00000409938 ZNF274Q96GC6 653 aaPredicted RBP9.21□□□□□ -0.93
EPHA4-203ENST00000409938 CHMP3Q9Y3E7 222 aa9.21□□□□□ -0.93
EPHA4-203ENST00000409938 FAM177BA6PVY3 158 aa9.21□□□□□ -0.94
EPHA4-203ENST00000409938 FOXP2O15409 715 aa9.21□□□□□ -0.94
EPHA4-203ENST00000409938 LRRC8AQ8IWT6 810 aa9.21□□□□□ -0.94
EPHA4-203ENST00000409938 PLCB2Q00722 1185 aa9.21□□□□□ -0.94
EPHA4-203ENST00000409938 KRT28Q7Z3Y7 464 aa9.21□□□□□ -0.94
EPHA4-203ENST00000409938 DCAF5Q96JK2 942 aa9.21□□□□□ -0.94
EPHA4-203ENST00000409938 PTPDC1A2A3K4 754 aa9.2□□□□□ -0.94
EPHA4-203ENST00000409938 GOLGA6L4A6NEF3 574 aa9.2□□□□□ -0.94
EPHA4-203ENST00000409938 CYP27B1O15528 508 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms