RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 MCF2L2Q86YR7 1114 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 CERS3Q8IU89 383 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 MSL3Q8N5Y2 521 aaKnown RBP4.66□□□□□ -1.66
RGPD1-202ENST00000409776 CCDC89Q8N998 374 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 FRAT1Q92837 279 aaPredicted RBP4.66□□□□□ -1.66
RGPD1-202ENST00000409776 SECISBP2LQ93073 1101 aaKnown RBP4.66□□□□□ -1.66
RGPD1-202ENST00000409776 ZNF653Q96CK0 615 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 TSNARE1Q96NA8 513 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 CEP126Q9P2H0 1117 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 SCOCQ9UIL1 159 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 ATAD2Q6PL18 1390 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 A0A0B4J269 797 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 PHBP35232 272 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 TUBB3Q13509 450 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 PPP4R3BQ5MIZ7 849 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 FAM180AQ6UWF9 173 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 HELBQ8NG08 1087 aaPredicted RBP4.66□□□□□ -1.66
RGPD1-202ENST00000409776 CABLES1Q8TDN4 633 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 AMOTL2Q9Y2J4 779 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 SASH1O94885 1247 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 TRIM37O94972 964 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 NFE2L2Q16236 605 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 RUNDC3AQ59EK9 446 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 DENND6AQ8IWF6 608 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 TMC2Q8TDI7 906 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 AFAP1L1Q8TED9 768 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 KLHL31Q9H511 634 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 SH2D4AQ9H788 454 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 SPC25Q9HBM1 224 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 NOL7Q9UMY1 257 aaKnown RBP4.66□□□□□ -1.66
RGPD1-202ENST00000409776 GMEB1Q9Y692 573 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 SESN1Q9Y6P5 492 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 SMTNL1A8MU46 457 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 MOCS3O95396 460 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 SKIP12755 728 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 DNAJC3Q13217 504 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 CNTROBQ8N137 903 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 B3GALT6Q96L58 329 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 CEP19Q96LK0 163 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 UTP14AQ9BVJ6 771 aaKnown RBP4.66□□□□□ -1.66
RGPD1-202ENST00000409776 MTMR7Q9Y216 660 aa4.66□□□□□ -1.66
RGPD1-202ENST00000409776 DKC1O60832 514 aaKnown RBP eCLIP4.65□□□□□ -1.66
RGPD1-202ENST00000409776 MTRF1O75570 445 aaKnown RBP4.65□□□□□ -1.66
RGPD1-202ENST00000409776 MX2P20592 715 aa4.65□□□□□ -1.66
RGPD1-202ENST00000409776 POLR2FP61218 127 aaKnown RBP4.65□□□□□ -1.66
RGPD1-202ENST00000409776 RRS1Q15050 365 aaKnown RBP4.65□□□□□ -1.66
RGPD1-202ENST00000409776 PPP1R14CQ8TAE6 165 aa4.65□□□□□ -1.66
RGPD1-202ENST00000409776 THUMPD2Q9BTF0 503 aaKnown RBP4.65□□□□□ -1.66
RGPD1-202ENST00000409776 SCHIP1Q9P0W5 487 aaPredicted RBP4.65□□□□□ -1.66
RGPD1-202ENST00000409776 ROCK1Q13464 1354 aa4.65□□□□□ -1.66
RGPD1-202ENST00000409776 MECOMQ03112 1051 aa4.65□□□□□ -1.66
RGPD1-202ENST00000409776 C11orf88Q6PI97 169 aa4.65□□□□□ -1.66
RGPD1-202ENST00000409776 LSM14AQ8ND56 463 aaKnown RBP4.65□□□□□ -1.66
RGPD1-202ENST00000409776 SMAD5Q99717 465 aaKnown RBP4.65□□□□□ -1.66
RGPD1-202ENST00000409776 USO1O60763 962 aaKnown RBP4.65□□□□□ -1.66
RGPD1-202ENST00000409776 DEAF1O75398 565 aaPredicted RBP4.65□□□□□ -1.66
RGPD1-202ENST00000409776 ESRRAP11474 423 aaPredicted RBP4.65□□□□□ -1.66
RGPD1-202ENST00000409776 ATF3P18847 181 aa4.65□□□□□ -1.66
RGPD1-202ENST00000409776 OLR1P78380 273 aa4.65□□□□□ -1.66
RGPD1-202ENST00000409776 ZBTB16Q05516 673 aa4.65□□□□□ -1.66
RGPD1-202ENST00000409776 MRPL28Q13084 256 aaKnown RBP4.65□□□□□ -1.66
RGPD1-202ENST00000409776 TRIM14Q14142 442 aa4.65□□□□□ -1.66
RGPD1-202ENST00000409776 HDXQ7Z353 690 aa4.65□□□□□ -1.66
RGPD1-202ENST00000409776 KIAA1524Q8TCG1 905 aa4.65□□□□□ -1.66
RGPD1-202ENST00000409776 CCDC94Q9BW85 323 aaPredicted RBP4.65□□□□□ -1.66
RGPD1-202ENST00000409776 SIL1Q9H173 461 aa4.65□□□□□ -1.66
RGPD1-202ENST00000409776 LZTFL1Q9NQ48 299 aa4.65□□□□□ -1.66
RGPD1-202ENST00000409776 MAGEC2Q9UBF1 373 aaPredicted RBP4.65□□□□□ -1.66
RGPD1-202ENST00000409776 IPO5O00410 1097 aaKnown RBP4.65□□□□□ -1.67
RGPD1-202ENST00000409776 ZEB2O60315 1214 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 EFCAB13Q8IY85 973 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 PARD3BQ8TEW8 1205 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 ATP6V0A1Q93050 837 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 BHMTQ93088 406 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 ROGDIQ9GZN7 287 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 DDX28Q9NUL7 540 aaKnown RBP4.65□□□□□ -1.67
RGPD1-202ENST00000409776 TEKT2Q9UIF3 430 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 SYNPO2Q9UMS6 1093 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 ZNF148Q9UQR1 794 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 PABPN1LA6NDY0 278 aaKnown RBP4.65□□□□□ -1.67
RGPD1-202ENST00000409776 GOLGA8BA8MQT2 603 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 OPHN1O60890 802 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 APOEP02649 317 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 CASTP20810 708 aaKnown RBP4.65□□□□□ -1.67
RGPD1-202ENST00000409776 GOLGA8FQ08AF8 430 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 GOLGA8DPQ0D2H9 430 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 TRAF1Q13077 416 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 NXNQ6DKJ4 435 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 GRAMD4Q6IC98 578 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 TAOK1Q7L7X3 1001 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 EXOC8Q8IYI6 725 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 GOLGA5Q8TBA6 731 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 LRRC59Q96AG4 307 aaKnown RBP4.65□□□□□ -1.67
RGPD1-202ENST00000409776 IFT74Q96LB3 600 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 TMX1Q9H3N1 280 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 ZSCAN32Q9NX65 697 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 APOBEC2Q9Y235 224 aaKnown RBP4.65□□□□□ -1.67
RGPD1-202ENST00000409776 NBPF26B4DH59 902 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 BAG2O95816 211 aa4.65□□□□□ -1.67
RGPD1-202ENST00000409776 APOA4P06727 396 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms