RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 DDX60Q8IY21 1712 aaKnown RBP17.11■□□□□ 0.33
LIMS2-206ENST00000409754 LAMB2P55268 1798 aa17.11■□□□□ 0.33
LIMS2-206ENST00000409754 DLEC1Q9Y238 1755 aa17.11■□□□□ 0.33
LIMS2-206ENST00000409754 ABCC12Q96J65 1359 aa17.1■□□□□ 0.33
LIMS2-206ENST00000409754 PDE8AO60658 829 aa17.1■□□□□ 0.33
LIMS2-206ENST00000409754 ATP5JP18859 108 aa17.1■□□□□ 0.33
LIMS2-206ENST00000409754 POLD1P28340 1107 aa17.1■□□□□ 0.33
LIMS2-206ENST00000409754 CTSWP56202 376 aa17.1■□□□□ 0.33
LIMS2-206ENST00000409754 IFIT5Q13325 482 aaKnown RBP17.1■□□□□ 0.33
LIMS2-206ENST00000409754 RABEP1Q15276 862 aa17.1■□□□□ 0.33
LIMS2-206ENST00000409754 CCDC24Q8N4L8 307 aa17.1■□□□□ 0.33
LIMS2-206ENST00000409754 TTLL11Q8NHH1 800 aa17.1■□□□□ 0.33
LIMS2-206ENST00000409754 NIP7Q9Y221 180 aaKnown RBP eCLIP17.1■□□□□ 0.33
LIMS2-206ENST00000409754 SERPINB2P05120 415 aa17.1■□□□□ 0.33
LIMS2-206ENST00000409754 LRRC24Q50LG9 513 aa17.1■□□□□ 0.33
LIMS2-206ENST00000409754 SYNE4Q8N205 404 aa17.1■□□□□ 0.33
LIMS2-206ENST00000409754 NLGN2Q8NFZ4 835 aa17.1■□□□□ 0.33
LIMS2-206ENST00000409754 ZNF594Q96JF6 807 aaPredicted RBP17.1■□□□□ 0.33
LIMS2-206ENST00000409754 ZNF652Q9Y2D9 606 aa17.1■□□□□ 0.33
LIMS2-206ENST00000409754 SGSM2O43147 1006 aa17.09■□□□□ 0.33
LIMS2-206ENST00000409754 SUSD4Q5VX71 490 aa17.09■□□□□ 0.33
LIMS2-206ENST00000409754 PRR5LQ6MZQ0 368 aa17.09■□□□□ 0.33
LIMS2-206ENST00000409754 UTP14AQ9BVJ6 771 aaKnown RBP17.09■□□□□ 0.33
LIMS2-206ENST00000409754 SH3TC1Q8TE82 1336 aa17.09■□□□□ 0.33
LIMS2-206ENST00000409754 HIP1O00291 1037 aa17.08■□□□□ 0.32
LIMS2-206ENST00000409754 NTSR2O95665 410 aa17.08■□□□□ 0.32
LIMS2-206ENST00000409754 MCCP23508 829 aa17.08■□□□□ 0.32
LIMS2-206ENST00000409754 TAF7LQ5H9L4 462 aa17.08■□□□□ 0.32
LIMS2-206ENST00000409754 RUFY2Q8WXA3 655 aa17.08■□□□□ 0.32
LIMS2-206ENST00000409754 DBNDD2Q9BQY9 259 aa17.08■□□□□ 0.32
LIMS2-206ENST00000409754 BOLA2Q9H3K6 86 aa17.08■□□□□ 0.32
LIMS2-206ENST00000409754 ANO2Q9NQ90 1003 aa17.08■□□□□ 0.32
LIMS2-206ENST00000409754 DIAPH3Q9NSV4 1193 aa17.08■□□□□ 0.32
LIMS2-206ENST00000409754 PARP3Q9Y6F1 533 aa17.08■□□□□ 0.32
LIMS2-206ENST00000409754 ZNF609O15014 1411 aa17.08■□□□□ 0.32
LIMS2-206ENST00000409754 MYH3P11055 1940 aa17.08■□□□□ 0.32
LIMS2-206ENST00000409754 ANKRD18BA2A2Z9 1011 aa17.07■□□□□ 0.32
LIMS2-206ENST00000409754 SETDB2Q96T68 719 aa17.07■□□□□ 0.32
LIMS2-206ENST00000409754 PUS3Q9BZE2 481 aaKnown RBP17.07■□□□□ 0.32
LIMS2-206ENST00000409754 CEP126Q9P2H0 1117 aa17.07■□□□□ 0.32
LIMS2-206ENST00000409754 FAM177BA6PVY3 158 aa17.07■□□□□ 0.32
LIMS2-206ENST00000409754 HSP90B1P14625 803 aaKnown RBP17.07■□□□□ 0.32
LIMS2-206ENST00000409754 ITGA6P23229 1130 aa17.07■□□□□ 0.32
LIMS2-206ENST00000409754 SYT17Q9BSW7 474 aa17.07■□□□□ 0.32
LIMS2-206ENST00000409754 IL25Q9H293 177 aa17.07■□□□□ 0.32
LIMS2-206ENST00000409754 GREM2Q9H772 168 aa17.07■□□□□ 0.32
LIMS2-206ENST00000409754 COL4A1P02462 1669 aa17.06■□□□□ 0.32
LIMS2-206ENST00000409754 ANAPC15P60006 121 aa17.06■□□□□ 0.32
LIMS2-206ENST00000409754 IL17RAQ96F46 866 aa17.06■□□□□ 0.32
LIMS2-206ENST00000409754 CCDC85AQ96PX6 553 aaPredicted RBP17.06■□□□□ 0.32
LIMS2-206ENST00000409754 AKAP2Q9Y2D5 859 aa17.06■□□□□ 0.32
LIMS2-206ENST00000409754 HAUS7Q99871 368 aa17.05■□□□□ 0.32
LIMS2-206ENST00000409754 PPP1R1BQ9UD71 204 aaPredicted RBP17.05■□□□□ 0.32
LIMS2-206ENST00000409754 RFX7Q2KHR2 1363 aa17.05■□□□□ 0.32
LIMS2-206ENST00000409754 CWC27Q6UX04 472 aaKnown RBP17.04■□□□□ 0.32
LIMS2-206ENST00000409754 C3orf67Q6ZVT6 689 aa17.04■□□□□ 0.32
LIMS2-206ENST00000409754 NEUROD6Q96NK8 337 aa17.04■□□□□ 0.32
LIMS2-206ENST00000409754 RIPOR2Q9Y4F9 1068 aa17.04■□□□□ 0.32
LIMS2-206ENST00000409754 RAD50Q92878 1312 aa17.04■□□□□ 0.32
LIMS2-206ENST00000409754 A0A1B0GUL7 405 aa17.03■□□□□ 0.32
LIMS2-206ENST00000409754 KCNA3P22001 575 aa17.03■□□□□ 0.32
LIMS2-206ENST00000409754 TIMM10P62072 90 aa17.03■□□□□ 0.32
LIMS2-206ENST00000409754 CNBD1Q8NA66 436 aa17.03■□□□□ 0.32
LIMS2-206ENST00000409754 FSD1Q9BTV5 496 aa17.03■□□□□ 0.32
LIMS2-206ENST00000409754 LSG1Q9H089 658 aaKnown RBP17.03■□□□□ 0.32
LIMS2-206ENST00000409754 ANTXR1Q9H6X2 564 aa17.03■□□□□ 0.32
LIMS2-206ENST00000409754 CD2APQ9Y5K6 639 aa17.03■□□□□ 0.32
LIMS2-206ENST00000409754 RIC1Q4ADV7 1423 aa17.03■□□□□ 0.32
LIMS2-206ENST00000409754 K7ELQ4 463 aaPredicted RBP17.03■□□□□ 0.32
LIMS2-206ENST00000409754 ERFEQ4G0M1 354 aa17.03■□□□□ 0.32
LIMS2-206ENST00000409754 LDHAL6AQ6ZMR3 332 aa17.03■□□□□ 0.32
LIMS2-206ENST00000409754 KIAA1211Q6ZU35 1233 aa17.03■□□□□ 0.32
LIMS2-206ENST00000409754 NBPF5PQ86XG9 351 aaPredicted RBP17.03■□□□□ 0.32
LIMS2-206ENST00000409754 TICAM2Q86XR7 235 aa17.03■□□□□ 0.32
LIMS2-206ENST00000409754 KLHL34Q8N239 644 aa17.03■□□□□ 0.32
LIMS2-206ENST00000409754 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.03■□□□□ 0.32
LIMS2-206ENST00000409754 SNRKQ9NRH2 765 aa17.03■□□□□ 0.32
LIMS2-206ENST00000409754 CACNA1SQ13698 1873 aa17.03■□□□□ 0.32
LIMS2-206ENST00000409754 RTL9Q8NET4 1388 aa17.02■□□□□ 0.32
LIMS2-206ENST00000409754 CD2BP2O95400 341 aaKnown RBP17.02■□□□□ 0.31
LIMS2-206ENST00000409754 HSPA4P34932 840 aa17.02■□□□□ 0.31
LIMS2-206ENST00000409754 IL27Q8NEV9 243 aa17.02■□□□□ 0.31
LIMS2-206ENST00000409754 TAF1P21675 1872 aa17.01■□□□□ 0.31
LIMS2-206ENST00000409754 ST18O60284 1047 aa17.01■□□□□ 0.31
LIMS2-206ENST00000409754 HCLS1P14317 486 aaPredicted RBP17.01■□□□□ 0.31
LIMS2-206ENST00000409754 CHRNA5P30532 468 aa17.01■□□□□ 0.31
LIMS2-206ENST00000409754 SLKQ9H2G2 1235 aaPredicted RBP17.01■□□□□ 0.31
LIMS2-206ENST00000409754 CNNM1Q9NRU3 951 aa17.01■□□□□ 0.31
LIMS2-206ENST00000409754 NMIQ13287 307 aaPredicted RBP17■□□□□ 0.31
LIMS2-206ENST00000409754 CCDC152Q4G0S7 254 aa17■□□□□ 0.31
LIMS2-206ENST00000409754 METTL24Q5JXM2 366 aa17■□□□□ 0.31
LIMS2-206ENST00000409754 KLRG2A4D1S0 409 aaPredicted RBP16.99■□□□□ 0.31
LIMS2-206ENST00000409754 DPEP1P16444 411 aa16.99■□□□□ 0.31
LIMS2-206ENST00000409754 XAGE2Q96GT9 111 aa16.99■□□□□ 0.31
LIMS2-206ENST00000409754 DNAJC2Q99543 621 aaKnown RBP16.99■□□□□ 0.31
LIMS2-206ENST00000409754 PALD1Q9ULE6 856 aa16.99■□□□□ 0.31
LIMS2-206ENST00000409754 A0A0G2JLW4 131 aa16.99■□□□□ 0.31
LIMS2-206ENST00000409754 ATP2B3Q16720 1220 aa16.99■□□□□ 0.31
LIMS2-206ENST00000409754 CCDC158Q5M9N0 1113 aa16.99■□□□□ 0.31
LIMS2-206ENST00000409754 SLC51AQ86UW1 340 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms