RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 ERLIN1O75477 346 aa6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 MYCNP04198 464 aaPredicted RBP6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 MAP3K9P80192 1104 aa6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 APOBRQ0VD83 1088 aa6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 PRPF40BQ6NWY9 871 aaKnown RBP6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 MED4Q9NPJ6 270 aa6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 A0A087WUV0 522 aaPredicted RBP6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 H3BQF6 201 aa6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 ATP6V1AP38606 617 aa6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 ADCK5Q3MIX3 580 aa6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 CT47A1Q5JQC4 288 aaPredicted RBP6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 ATL3Q6DD88 541 aa6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 LARP1Q6PKG0 1096 aaKnown RBP6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 CCAR1Q8IX12 1150 aaKnown RBP6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 ANKRD20A12PQ8NF67 263 aa6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 SPG7Q9UQ90 795 aa6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 MRFAP1Q9Y605 127 aa6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 SETD1AO15047 1707 aaKnown RBP6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 ADCY9O60503 1353 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 EIF5P55010 431 aaKnown RBP6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 TACO1Q9BSH4 297 aaKnown RBP6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 XPO4Q9C0E2 1151 aaKnown RBP6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 ACBD3Q9H3P7 528 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 MAP2K2P36507 400 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 FAM160A1Q05DH4 1040 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 RESTQ13127 1097 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 HSP90B2PQ58FF3 399 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 TADA2BQ86TJ2 420 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 CEP120Q8N960 986 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 CRYBG1Q9Y4K1 1723 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 CBFA2T2O43439 604 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 DCTN1Q14203 1278 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 SART3Q15020 963 aaKnown RBP6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 NUTM1Q86Y26 1132 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 FAM71BQ8TC56 605 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 SYTL4Q96C24 671 aaPredicted RBP6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 IFNKQ9P0W0 207 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 MAP3K5Q99683 1374 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 USP42Q9H9J4 1324 aaKnown RBP6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 H3BQV1 296 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 MAP4K4O95819 1239 aaPredicted RBP6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 TRDNQ13061 729 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 NECTIN1Q15223 517 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 IFFO2Q5TF58 517 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 DNAAF4Q8WXU2 420 aa6.76□□□□□ -1.33
R3HDM1-202ENST00000409478 F6X3S4 739 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 PPFIA4O75335 1185 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 GLRX3O76003 335 aaKnown RBP6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 USP5P45974 858 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 SAFB2Q14151 953 aaKnown RBP eCLIP6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 DNAJC21Q5F1R6 531 aaKnown RBP6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 ERC1Q8IUD2 1116 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 DDX11Q96FC9 970 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 GBP3Q9H0R5 595 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 PDE11AQ9HCR9 933 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 IL1RAPL2Q9NP60 686 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 ITSN1Q15811 1721 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 ATP7BP35670 1465 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 ARHGAP6O43182 974 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 TUBBP07437 444 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 BLOC1S2Q6QNY1 142 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 SSH3Q8TE77 659 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 STK31Q9BXU1 1019 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 RCOR1Q9UKL0 485 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 PXDNLA1KZ92 1463 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 HIP1O00291 1037 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 HSP90AB4PQ58FF6 505 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 CCDC30Q5VVM6 783 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 CREB3L3Q68CJ9 461 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 RHPN1Q8TCX5 695 aa6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 ZNF396Q96N95 335 aaPredicted RBP6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 UTP14AQ9BVJ6 771 aaKnown RBP6.75□□□□□ -1.33
R3HDM1-202ENST00000409478 PTH1RQ03431 593 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 LRRC31Q6UY01 552 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 ENGASEQ8NFI3 743 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 SUFUQ9UMX1 484 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 VWA3AA6NCI4 1184 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 MYO1BO43795 1136 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 SATB1Q01826 763 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 TUBB2AQ13885 445 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 BEND6Q5SZJ8 279 aaPredicted RBP6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 CEP112Q8N8E3 955 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 TUBB2BQ9BVA1 445 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 CARD10Q9BWT7 1032 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 EPC1Q9H2F5 836 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 RAB21Q9UL25 225 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 EMILIN1Q9Y6C2 1016 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 PTPRMP28827 1452 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 MAP2P11137 1827 aaKnown RBP6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 RPS6KB1P23443 525 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 GNG11P61952 73 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 SETQ01105 290 aaPredicted RBP6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 MCM6Q14566 821 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 E2F4Q16254 413 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 ERCC4Q92889 916 aaPredicted RBP6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 GOLPH3LQ9H4A5 285 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 PPP2R2CQ9Y2T4 447 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 NPATQ14207 1427 aa6.74□□□□□ -1.33
R3HDM1-202ENST00000409478 IKBKBO14920 756 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 UBTFL1P0CB47 393 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms