RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 TSHZ3Q63HK5 1081 aa20.7■□□□□ 0.9
SSB-202ENST00000409333 VGLL2Q8N8G2 317 aa20.7■□□□□ 0.9
SSB-202ENST00000409333 MTFR1LQ9H019 292 aa20.7■□□□□ 0.9
SSB-202ENST00000409333 TLR7Q9NYK1 1049 aaKnown RBP20.7■□□□□ 0.9
SSB-202ENST00000409333 CEP126Q9P2H0 1117 aa20.7■□□□□ 0.9
SSB-202ENST00000409333 ATF5Q9Y2D1 282 aaPredicted RBP20.7■□□□□ 0.9
SSB-202ENST00000409333 C10orf71Q711Q0 1435 aa20.69■□□□□ 0.9
SSB-202ENST00000409333 PDE1AP54750 535 aa20.69■□□□□ 0.9
SSB-202ENST00000409333 RPS8P62241 208 aaKnown RBP20.69■□□□□ 0.9
SSB-202ENST00000409333 CCDC8Q9H0W5 538 aaPredicted RBP20.69■□□□□ 0.9
SSB-202ENST00000409333 KIAA1551Q9HCM1 1747 aa20.69■□□□□ 0.9
SSB-202ENST00000409333 IFIT2P09913 472 aaKnown RBP20.69■□□□□ 0.9
SSB-202ENST00000409333 PDE6BP35913 854 aa20.69■□□□□ 0.9
SSB-202ENST00000409333 BSDC1Q9NW68 430 aaPredicted RBP20.69■□□□□ 0.9
SSB-202ENST00000409333 MROH5Q6ZUA9 1318 aa20.68■□□□□ 0.9
SSB-202ENST00000409333 GRAPQ13588 217 aa20.68■□□□□ 0.9
SSB-202ENST00000409333 HELBQ8NG08 1087 aaPredicted RBP20.68■□□□□ 0.9
SSB-202ENST00000409333 GRAPLQ8TC17 118 aaPredicted RBP20.68■□□□□ 0.9
SSB-202ENST00000409333 RBM17Q96I25 401 aaKnown RBP20.68■□□□□ 0.9
SSB-202ENST00000409333 HOXA10P31260 410 aaPredicted RBP20.67■□□□□ 0.9
SSB-202ENST00000409333 CHRNDQ07001 517 aa20.67■□□□□ 0.9
SSB-202ENST00000409333 GPR108Q9NPR9 543 aa20.67■□□□□ 0.9
SSB-202ENST00000409333 A0A1B0GUL7 405 aa20.67■□□□□ 0.9
SSB-202ENST00000409333 SRGNP10124 158 aa20.67■□□□□ 0.9
SSB-202ENST00000409333 TIMM10P62072 90 aa20.67■□□□□ 0.9
SSB-202ENST00000409333 SLC51AQ86UW1 340 aa20.67■□□□□ 0.9
SSB-202ENST00000409333 PELP1Q8IZL8 1130 aaKnown RBP20.67■□□□□ 0.9
SSB-202ENST00000409333 OSBPL3Q9H4L5 887 aa20.67■□□□□ 0.9
SSB-202ENST00000409333 STAP2Q9UGK3 403 aa20.67■□□□□ 0.9
SSB-202ENST00000409333 DBNLQ9UJU6 430 aaKnown RBP20.67■□□□□ 0.9
SSB-202ENST00000409333 SLX4Q8IY92 1834 aa20.67■□□□□ 0.9
SSB-202ENST00000409333 TAF5LO75529 589 aa20.66■□□□□ 0.9
SSB-202ENST00000409333 PDE8BO95263 885 aa20.66■□□□□ 0.9
SSB-202ENST00000409333 NEUROD6Q96NK8 337 aa20.65■□□□□ 0.9
SSB-202ENST00000409333 DBNDD2Q9BQY9 259 aa20.65■□□□□ 0.9
SSB-202ENST00000409333 MINPP1Q9UNW1 487 aa20.65■□□□□ 0.9
SSB-202ENST00000409333 LTBP1Q14766 1721 aa20.65■□□□□ 0.9
SSB-202ENST00000409333 GSPT1P15170 499 aaKnown RBP20.64■□□□□ 0.9
SSB-202ENST00000409333 TTC22Q5TAA0 569 aa20.64■□□□□ 0.9
SSB-202ENST00000409333 CRAMP1Q96RY5 1269 aa20.64■□□□□ 0.9
SSB-202ENST00000409333 AKAP2Q9Y2D5 859 aa20.64■□□□□ 0.9
SSB-202ENST00000409333 MYH13Q9UKX3 1938 aa20.64■□□□□ 0.9
SSB-202ENST00000409333 AKAP11Q9UKA4 1901 aa20.64■□□□□ 0.89
SSB-202ENST00000409333 NPR1P16066 1061 aa20.64■□□□□ 0.89
SSB-202ENST00000409333 POLD1P28340 1107 aa20.64■□□□□ 0.89
SSB-202ENST00000409333 BRCA1P38398 1863 aaKnown RBP20.64■□□□□ 0.89
SSB-202ENST00000409333 ATP2B3Q16720 1220 aa20.64■□□□□ 0.89
SSB-202ENST00000409333 C2CD5Q86YS7 1000 aa20.64■□□□□ 0.89
SSB-202ENST00000409333 PI4K2BQ8TCG2 481 aa20.64■□□□□ 0.89
SSB-202ENST00000409333 AOX1Q06278 1338 aa20.63■□□□□ 0.89
SSB-202ENST00000409333 TTC41PQ6P2S7 1318 aa20.63■□□□□ 0.89
SSB-202ENST00000409333 SNAP23O00161 211 aa20.63■□□□□ 0.89
SSB-202ENST00000409333 MASTLQ96GX5 879 aa20.63■□□□□ 0.89
SSB-202ENST00000409333 CHRNA5P30532 468 aa20.62■□□□□ 0.89
SSB-202ENST00000409333 ADORA1P30542 326 aa20.62■□□□□ 0.89
SSB-202ENST00000409333 PUM3Q15397 648 aaKnown RBP20.62■□□□□ 0.89
SSB-202ENST00000409333 SGIP1Q9BQI5 828 aa20.62■□□□□ 0.89
SSB-202ENST00000409333 ECHDC1Q9NTX5 307 aa20.62■□□□□ 0.89
SSB-202ENST00000409333 H0YIN7 160 aa20.62■□□□□ 0.89
SSB-202ENST00000409333 FGFR2P21802 821 aa20.62■□□□□ 0.89
SSB-202ENST00000409333 BMP2KLQ5H9B9 411 aa20.62■□□□□ 0.89
SSB-202ENST00000409333 GPATCH3Q96I76 525 aa20.62■□□□□ 0.89
SSB-202ENST00000409333 XAGE2Q96GT9 111 aa20.61■□□□□ 0.89
SSB-202ENST00000409333 WTIPA6NIX2 430 aaPredicted RBP20.6■□□□□ 0.89
SSB-202ENST00000409333 BBOX1O75936 387 aa20.6■□□□□ 0.89
SSB-202ENST00000409333 ZNF622Q969S3 477 aaKnown RBP eCLIP20.6■□□□□ 0.899e-11■■□□□ 13.2
SSB-202ENST00000409333 MYO5AQ9Y4I1 1855 aaKnown RBP20.6■□□□□ 0.89
SSB-202ENST00000409333 PPEF1O14829 653 aaPredicted RBP20.59■□□□□ 0.89
SSB-202ENST00000409333 PTGER2P43116 358 aa20.59■□□□□ 0.89
SSB-202ENST00000409333 LPIN2Q92539 896 aa20.59■□□□□ 0.89
SSB-202ENST00000409333 GOLGB1Q14789 3259 aaKnown RBP20.59■□□□□ 0.89
SSB-202ENST00000409333 ALDH1B1P30837 517 aa20.59■□□□□ 0.89
SSB-202ENST00000409333 STYK1Q6J9G0 422 aa20.59■□□□□ 0.89
SSB-202ENST00000409333 ERC2O15083 957 aa20.58■□□□□ 0.89
SSB-202ENST00000409333 GLRX3O76003 335 aaKnown RBP20.58■□□□□ 0.89
SSB-202ENST00000409333 SLC5A1P13866 664 aa20.58■□□□□ 0.89
SSB-202ENST00000409333 ANKRD2Q9GZV1 360 aa20.58■□□□□ 0.89
SSB-202ENST00000409333 MYH7P12883 1935 aa20.58■□□□□ 0.88
SSB-202ENST00000409333 MAP4K4O95819 1239 aaPredicted RBP20.57■□□□□ 0.88
SSB-202ENST00000409333 SDSP20132 328 aa20.57■□□□□ 0.88
SSB-202ENST00000409333 GORABQ5T7V8 394 aa20.57■□□□□ 0.88
SSB-202ENST00000409333 ATP5JP18859 108 aa20.56■□□□□ 0.88
SSB-202ENST00000409333 UBE4AQ14139 1066 aa20.56■□□□□ 0.88
SSB-202ENST00000409333 C8orf34Q49A92 452 aa20.56■□□□□ 0.88
SSB-202ENST00000409333 TMC4Q7Z404 712 aa20.56■□□□□ 0.88
SSB-202ENST00000409333 BOLA2Q9H3K6 86 aa20.56■□□□□ 0.88
SSB-202ENST00000409333 ANKIB1Q9P2G1 1089 aa20.56■□□□□ 0.88
SSB-202ENST00000409333 DUOX1Q9NRD9 1551 aa20.56■□□□□ 0.88
SSB-202ENST00000409333 IFIT1P09914 478 aaKnown RBP20.55■□□□□ 0.88
SSB-202ENST00000409333 GPSM2P81274 684 aa20.55■□□□□ 0.88
SSB-202ENST00000409333 PRPF40BQ6NWY9 871 aaKnown RBP20.55■□□□□ 0.88
SSB-202ENST00000409333 OLFM4Q6UX06 510 aa20.55■□□□□ 0.88
SSB-202ENST00000409333 ATP6V0A2Q9Y487 856 aa20.55■□□□□ 0.88
SSB-202ENST00000409333 XDHP47989 1333 aa20.55■□□□□ 0.88
SSB-202ENST00000409333 A0A0G2JLW4 131 aa20.54■□□□□ 0.88
SSB-202ENST00000409333 TRIM6-TRIM34B2RNG4 842 aa20.54■□□□□ 0.88
SSB-202ENST00000409333 DPEP1P16444 411 aa20.54■□□□□ 0.88
SSB-202ENST00000409333 KCNJ4P48050 445 aa20.54■□□□□ 0.88
SSB-202ENST00000409333 CCDC158Q5M9N0 1113 aa20.54■□□□□ 0.88
SSB-202ENST00000409333 SP8Q8IXZ3 490 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms